BQ623489

Overview
NameBQ623489
Unique NameBQ623489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.482e-20
Identity = 56/172 (32.56%), Postives = 89/172 (51.74%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAK---LLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L W  R  + IGAARGL YLH      IIHRD+K+ N+LLD+   A V DFGL++    +D  ++HV+T V+G+ G++ PEY    Q ++K+DV+ FG++L E++    A++    + ++  + EW              D  +        + +  + A  C     V RP
Sbjct:  582 LSWKQRLEVCIGAARGLHYLHTGSSQGIIHRDIKSTNILLDNNYVAKVADFGLSRSGPCID--ETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVD-PLLVREQVNLAEWAIEWQRKGMLDQIVDPNIADEIKPCSLKKFAETAEKCCADYGVDRP 750          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.482e-20
Identity = 47/118 (39.83%), Postives = 70/118 (59.32%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKG 358
            + W  R  IAI  A  L YLH      I HRD+K  N+LLD+   A V DFG ++ +    +H+TT V GT G++ PEY  + + +EK+DV+ FG++L+EL+TG +     +S   +G
Sbjct:  510 MTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDERNRAKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEKPSSRVRSEENRG 627          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 7.160e-20
Identity = 44/108 (40.74%), Postives = 67/108 (62.04%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRAL 328
            + W  R RIA+  A  L Y+H      I HRD+K  N+LLD+   A + DFG ++ +    +H+TT V GT G++ PEY  + Q + K+DV+ FG++L+ELITG + +
Sbjct:  522 MTWEVRLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPM 629          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y4885_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3)

HSP 1 Score: 96.2857 bits (238), Expect = 9.351e-20
Identity = 63/171 (36.84%), Postives = 84/171 (49.12%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRI--EVGEILQVALLCTQYLPVHRP 511
            LDW  R  +  G A  L Y+H    P I+HRD+ + N+LL +  EA + DFG AKLL   DS   +AV GT G++APE     + +EK DV+ FG+L LE+I G    +   +++                      D  L      I  EV EIL+VALLC    P  RP
Sbjct:  874 LDWGKRINVVKGVAHALSYMHHDRSPAIVHRDISSGNILLGEDYEAKISDFGTAKLL-KPDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVLTLEVIKGEHPGDLVSTLSSS--------PPDATLSLKSISDHRLPEPTPEIKEEVLEILKVALLCLHSDPQARP 1035          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 9.351e-20
Identity = 60/170 (35.29%), Postives = 89/170 (52.35%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQK-GAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L W  R  +  G A  L Y+H      I+HRD+ + N+LLD+   A + DFG AKLL  +DS   +AV GT G++APE+  T + +EK DV+ FG+L+LELI G    +   S++   G  L                +RE        ++ +++++ALLC Q  P  RP
Sbjct:  950 LTWTKRINVVKGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISDFGTAKLL-KTDSSNWSAVAGTYGYVAPEFAYTMKVTEKCDVYSFGVLILELIIGKHPGDLVSSLSSSPGEALSLRSISDERVLEPRGQNRE--------KLLKMVEMALLCLQANPESRP 1110          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 9.351e-20
Identity = 44/102 (43.14%), Postives = 64/102 (62.75%), Query Frame = 2
Query:   11 WNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 316
            W  R RIA+  +    YLH      I HRD+K+ N+LLD+   A V DFG ++ +    +H TT + GTVG++ PEY  +   +EK+DV+ FG++L+ELITG
Sbjct:  550 WGVRMRIAVDISGAFSYLHTAACSPIYHRDIKSTNILLDEKYRAKVSDFGTSRSVSIDHTHWTTVISGTVGYVDPEYYGSSHFTEKSDVYSFGVVLVELITG 651          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.221e-19
Identity = 56/170 (32.94%), Postives = 87/170 (51.18%), Query Frame = 2
Query:    2 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            AL WN+R +IA+G AR L YLHE C P I+ +++K+AN+LLD      + D GLA  L  ++  +    +   G+ APE   +GQ S K+D++ FG+++LEL+TG +  +  +S +++  +                 D  L   Y    +     V  LC Q  P  RP
Sbjct:  512 ALVWNSRVKIALGTARALEYLHEVCSPSIVDKNIKSANILLDSELNPHLSDSGLASFLPTANELLN---QTDEGYSAPEVSMSGQYSLKSDIYSFGVVMLELLTGRKPFDSTRSRSEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRP 678          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 1.595e-19
Identity = 44/104 (42.31%), Postives = 65/104 (62.50%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 316
            + W  R  IAI  A  L YLH      I HRD+K  N+LLD+  +  V DFG ++ +    +H+TT V GT G++ PEY  + + ++K+DV+ FG++L+ELITG
Sbjct:  518 MTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITG 621          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CCR35_ARATH (Serine/threonine-protein kinase-like protein At3g51990 OS=Arabidopsis thaliana GN=At3g51990 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.595e-19
Identity = 61/168 (36.31%), Postives = 90/168 (53.57%), Query Frame = 2
Query:   11 WNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV-TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            W+ R +IA+  A+ +  LH Q  P IIHRD+K+ANVL+D    A +GDFGLA   +  D  V +T   GT+G++ P+Y++  + S KTDVF FGILLLE+I+G +A++   S      +++W              D  +G   D      +  VA  C +     RP
Sbjct:  157 WSKRIKIALQIAKAVHLLHSQETP-IIHRDIKSANVLMDKNLNAKLGDFGLAIRCNVDDQKVKSTPPAGTMGYLDPDYVTADRLSTKTDVFSFGILLLEIISGRKAIDVRYS---PSFIVDWAIPMIKRGKIGGIYDPRIGPPIDVSVRNHLGLVAAKCVRTCREKRP 320          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.553e-19
Identity = 44/112 (39.29%), Postives = 71/112 (63.39%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGK 340
            L WNTR RIA+G A+ + YLHE C P ++H+++K++N+LLD+     + D+GLA        H  T+    VG+ APE       ++K+DV+ FG+++LEL+TG +  + G+
Sbjct:  512 LTWNTRIRIALGTAKAIEYLHETCSPPLVHKNIKSSNILLDNELNPRLSDYGLANF------HHRTSQNLGVGYNAPECTDPSAYTQKSDVYSFGVVMLELLTGRKPYDSGR 617          
The following BLAST results are available for this feature:
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
Y5241_ARATH5.482e-2032.56Probable receptor-like protein kinase At5g24010 OS... [more]
WAKLB_ARATH5.482e-2039.83Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
WAKLC_ARATH7.160e-2040.74Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
Y4885_ARATH9.351e-2036.84Probable LRR receptor-like serine/threonine-protei... [more]
Y1571_ARATH9.351e-2035.29Probable leucine-rich repeat receptor-like protein... [more]
WAKLL_ARATH9.351e-2043.14Putative wall-associated receptor kinase-like 13 O... [more]
SRF6_ARATH1.221e-1932.94Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsi... [more]
WAKLD_ARATH1.595e-1942.31Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
CCR35_ARATH1.595e-1936.31Serine/threonine-protein kinase-like protein At3g5... [more]
SRF4_ARATH3.553e-1939.29Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00580 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00580 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623489 ID=BQ623489; Name=BQ623489; organism=Citrus sinensis; type=EST; length=525bp
GGCATTAGATTGGAACACTAGGAAGAGGATAGCAATTGGAGCTGCAAGGG
GTCTGTTATACCTACATGAGCAATGTGATCCAAAGATAATCCACAGAGAT
GTGAAGGCTGCTAATGTGCTTCTGGATGACTTCTGTGAGGCTATAGTTGG
TGACTTTGGCCTTGCAAAGCTTCTTGATCACTCCGACTCTCATGTGACTA
CTGCTGTCCGCGGTACTGTTGGTCATATAGCGCCTGAGTATCTCTCCACT
GGCCAGTCATCTGAGAAAACTGACGTGTTTGGATTTGGCATTCTCTTGTT
GGAGCTCATTACTGGAATGAGAGCTCTTGAGTTTGGCAAGTCTATTAATC
AGAAAGGAGCCATGCTTGAGTGGGTGAAGAAAATTCAGCAGGAAAAGAAA
GTAGAAGTGTTGGTGGACCGAGAGCTTGGAAGCAACTATGACCGGATTGA
GGTTGGAGAGATTCTTCAAGTGGCTTTGCTATGCACTCAATACCTTCCAG
TCCACCGCCCCAAATGTCCGAAGTG
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