BQ623489

Overview
NameBQ623489
Unique NameBQ623489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.817e-31
Identity = 71/163 (43.56%), Postives = 99/163 (60.74%), Query Frame = 2
Query:    2 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKG-AMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCT 487
            A++W    +IA+  AR L YLHEQC PK++HRD+K +N+LLD+   A + DFGL+KLL  S SHVTT V GT G++APEY  T + SEK DV+ +GI+LLELI+  RAL+   S ++ G  ++ W                 L       ++ E+L +AL CT
Sbjct:  353 AIEWKVLHKIALDVARALSYLHEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSKLLGTSQSHVTTGVAGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELISDKRALDPSFSSHENGFNIVSWAHMMLSQGKAKEVFTTGLWETGPPDDLVEVLHLALKCT 515          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.817e-31
Identity = 70/170 (41.18%), Postives = 107/170 (62.94%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELG-SNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW TR +IA+GAA+GL YLH  C P+IIHRD+K++N+LLD   EA + DFG+AK +  + ++ +T V GT+G+I PEY  T + +EK+D++ FGI+LLEL+TG +A++   +++Q                     D E+  +  D   + +  Q+ALLCT+  P+ RP
Sbjct:  745 LDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDGNFEARLSDFGIAKSIPATKTYASTYVLGTIGYIDPEYARTSRLNEKSDIYSFGIVLLELLTGKKAVDNEANLHQ------MILSKADDNTVMEAVDAEVSVTCMDSGHIKKTFQLALLCTKRNPLERP 908          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 6.903e-31
Identity = 70/169 (41.42%), Postives = 94/169 (55.62%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L WN R +IA G A GLLYLHE+ +  +IHRD+K +NVL++D     +GDFGLA+L +      TT V GT+G++APE    G+SS  +DVF FG+LLLE+++G R  + G        + +W              D  LG  YD +E    L V LLC    P  RP
Sbjct:  459 LSWNARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFGLARLYERGSQSNTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRPTDSGTFF-----LADWVMELHARGEILHAVDPRLGFGYDGVEARLALVVGLLCCHQRPTSRP 622          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.177e-30
Identity = 74/170 (43.53%), Postives = 105/170 (61.76%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNY-DRIEVGEILQVALLCTQYLPVHRP 511
            LDW+TR +IA GAA+GL YLH  C P+IIHRDVK++N+LLD   EA + DFG+AK L  S SH +T V GT+G+I PEY  T + +EK+DV+ +GI+LLEL+T  +A++   +++                      D ++ S   D   V ++ Q+ALLCT+  P  RP
Sbjct:  742 LDWDTRLKIAYGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDLEARLTDFGIAKSLCVSKSHTSTYVMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTRRKAVDDESNLHHL------IMSKTGNNEVMEMADPDITSTCKDLGVVKKVFQLALLCTKRQPNDRP 905          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.538e-30
Identity = 71/169 (42.01%), Postives = 93/169 (55.03%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L WN R +IA G A GLLYLHE+ +  +IHRDVK +NVL+D      +GDFGLA+L +      TT V GT+G++APE    G SS  +DVF FG+LLLE+++G +  + G        + +W              D  LGS YD  E    L V LLC  + P  RP
Sbjct:  460 LSWNARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSNVLIDSDMNPRLGDFGLARLYERGSQSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGRKPTDSGTFF-----IADWVMELQASGEILSAIDPRLGSGYDEGEARLALAVGLLCCHHKPESRP 623          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 2.008e-30
Identity = 67/170 (39.41%), Postives = 99/170 (58.24%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPK 514
            L W+ R  I +G A+GL YLHE  +PK++HRD+K++N+LLD    A V DFGLAKLL    S+VTT V GT G++APEY  TG  +EK+D++ FGIL++E+ITG   +++ +   +   +++W              D ++        +  +L VAL C       RPK
Sbjct:  249 LTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETN-LVDWLKSMVGNRRSEEVVDPKIPEPPSSKALKRVLLVALRCVDPDANKRPK 417          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 131.339 bits (329), Expect = 2.623e-30
Identity = 70/171 (40.94%), Postives = 103/171 (60.23%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGA--MLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L W TR RIA GAA+GLLYLHE CDP I+HRD+K++N+LLD+   + + DFGLA+L+   ++HV+T + GT+G+I PEY     ++ K DV+ FG++LLEL+T  R ++  K    KG   ++ W              D  + S  +  E+  +L++A LC    P  RP
Sbjct:  829 LKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVSTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRPVDMCK---PKGCRDLISWVVKMKHESRASEVFDPLIYSKENDKEMFRVLEIACLCLSENPKQRP 996          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 4.474e-30
Identity = 65/165 (39.39%), Postives = 99/165 (60.00%), Query Frame = 2
Query:    8 DWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALE-----FGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCT 487
            DW    +IA+  AR L YLH+QC P+++HRDVK +N+LLDD C A + DFGLA+LL  S++H TT V GT G++APEY  T + S+K DV+ +G++LLEL++  +AL+     +G   N    +++W                 L       ++ E+L +A++CT
Sbjct:  966 DWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDCNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFVSYGNGFN----IVQWACMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCT 1126          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 5.844e-30
Identity = 61/115 (53.04%), Postives = 85/115 (73.91%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL-DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSI 346
            LDW  R +IA+G+ +GL YLHE  DP IIHRDVK+ N+LLD+   A V DFGL+KL+ D   +HVTT V+GT+G++ PEY  T Q +EK+DV+GFG+++LEL+TG   ++ G  +
Sbjct:  727 LDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPIDRGSYV 841          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 9.968e-30
Identity = 72/171 (42.11%), Postives = 104/171 (60.82%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEF--GKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L W+ R +IA GAARGL YLH+ C+P +IHRDVK++N+LLD+  EA + DFGLA+LL   D+HVTT + GT+G+I PEY  +  ++ + DV+ FG++LLEL+TG R +E   GKS      ++                D  +  N +   V E+L++A  C  + P  RP
Sbjct:  849 LIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARLLRPYDTHVTTDLVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGRRPVEVCKGKSCRD---LVSRVFQMKAEKREAELIDTTIRENVNERTVLEMLEIACKCIDHEPRRRP 1016          
The following BLAST results are available for this feature:
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
RPK1_ARATH1.817e-3143.56Probable LRR receptor-like serine/threonine-protei... [more]
ERL2_ARATH1.817e-3141.18LRR receptor-like serine/threonine-protein kinase ... [more]
LRKA2_ARATH6.903e-3141.42Lectin-domain containing receptor kinase A4.2 OS=A... [more]
ERECT_ARATH1.177e-3043.53LRR receptor-like serine/threonine-protein kinase ... [more]
LRKA3_ARATH1.538e-3042.01Lectin-domain containing receptor kinase A4.3 OS=A... [more]
Y1154_ARATH2.008e-3039.41Probable serine/threonine-protein kinase At1g01540... [more]
PSKR1_ARATH2.623e-3040.94Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
RPK2_ARATH4.474e-3039.39LRR receptor-like serine/threonine-protein kinase ... [more]
Y5977_ARATH5.844e-3053.04Probable leucine-rich repeat receptor-like protein... [more]
PSKR2_ARATH9.968e-3042.11Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00580 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00580 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623489 ID=BQ623489; Name=BQ623489; organism=Citrus sinensis; type=EST; length=525bp
GGCATTAGATTGGAACACTAGGAAGAGGATAGCAATTGGAGCTGCAAGGG
GTCTGTTATACCTACATGAGCAATGTGATCCAAAGATAATCCACAGAGAT
GTGAAGGCTGCTAATGTGCTTCTGGATGACTTCTGTGAGGCTATAGTTGG
TGACTTTGGCCTTGCAAAGCTTCTTGATCACTCCGACTCTCATGTGACTA
CTGCTGTCCGCGGTACTGTTGGTCATATAGCGCCTGAGTATCTCTCCACT
GGCCAGTCATCTGAGAAAACTGACGTGTTTGGATTTGGCATTCTCTTGTT
GGAGCTCATTACTGGAATGAGAGCTCTTGAGTTTGGCAAGTCTATTAATC
AGAAAGGAGCCATGCTTGAGTGGGTGAAGAAAATTCAGCAGGAAAAGAAA
GTAGAAGTGTTGGTGGACCGAGAGCTTGGAAGCAACTATGACCGGATTGA
GGTTGGAGAGATTCTTCAAGTGGCTTTGCTATGCACTCAATACCTTCCAG
TCCACCGCCCCAAATGTCCGAAGTG
back to top