BQ623489

Overview
NameBQ623489
Unique NameBQ623489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 4.641e-19
Identity = 48/110 (43.64%), Postives = 71/110 (64.55%), Query Frame = 2
Query:    2 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALE 331
            +L W+ R +IA+  A  L YLH     KIIHRDVK+ N+LLD      V DFGL++L     +HV+TA +GT G++ P+Y    Q S K+DV+ F ++L+ELI+ + A++
Sbjct:  439 SLPWSIRLKIAVETASALKYLHAS---KIIHRDVKSNNILLDQNFNVKVADFGLSRLFPMDKTHVSTAPQGTPGYVDPDYHLCYQLSNKSDVYSFAVVLMELISSLPAVD 545          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y5168_ARATH (Probably inactive receptor-like protein kinase At5g41680 OS=Arabidopsis thaliana GN=At5g41680 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.061e-19
Identity = 58/170 (34.12%), Postives = 90/170 (52.94%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYD-RIEVGEILQVALLCTQYLPVHRP 511
            LDW +R RIAIGAARGL  +HE  D K +H ++K++N+  +  C   + D GL  +   + S   T +R + G+ APE   T +S++ +DV+ FG++LLEL+TG ++     S+++   +  W              D EL        E+ E+LQ+ L C    P  RP
Sbjct:  177 LDWESRLRIAIGAARGLAIIHEADDGKFVHGNIKSSNIFTNSKCYGCICDLGLTHI---TKSLPQTTLRSS-GYHAPEITDTRKSTQFSDVYSFGVVLLELLTG-KSPASPLSLDENMDLASWIRSVVSKEWTGEVFDNELMMQMGIEEELVEMLQIGLACVALKPQDRP 341          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.061e-19
Identity = 64/172 (37.21%), Postives = 93/172 (54.07%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML-EWXXXXXXXXXXXXXXDRELGSNYDRI--EVGEILQVALLCTQYLPVHRP 511
            LDW+ R RIAI AARGL +LH     K++H ++KA+N+LL    +  V D+GL +L  +S      A     G+ APE L T + + K+DV+ FG+LLLEL+TG    +   S+ ++G  L  W              D EL   Y  I  E+ ++LQ+A+ C   +P  RP
Sbjct:  446 LDWDNRMRIAITAARGLAHLHVSA--KLVHGNIKASNILLHPNQDTCVSDYGLNQLFSNSSPPNRLA-----GYHAPEVLETRKVTFKSDVYSFGVLLLELLTGKSPNQ--ASLGEEGIDLPRWVLSVVREEWTAEVFDVEL-MRYHNIEEEMVQLLQIAMACVSTVPDQRP 607          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 6.061e-19
Identity = 58/170 (34.12%), Postives = 86/170 (50.59%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH-SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L WN R RIA+ AA+ L YLHE CDP  IHR+ K+AN+LLDD     V D GLA L+   + S ++  +    G+ APE+   G  + K DV+ FG+++LEL+TG ++ +  +   ++  +                 D  L  +Y    +     V   C Q  P +RP
Sbjct:  575 LSWNVRVRIALEAAKALEYLHEICDPPSIHRNFKSANILLDDDIRVHVSDCGLAPLISSGAVSQLSGQLLAAYGYGAPEF-EYGIYTMKCDVYSFGVVMLELLTGRKSYDKKRDRGEQFLVRWAIPQLHDIDALAKMVDPSLKGDYPAKSLSHFADVISRCVQSEPEYRP 743          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: IRAK4_BOVIN (Interleukin-1 receptor-associated kinase 4 OS=Bos taurus GN=IRAK4 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.061e-19
Identity = 50/110 (45.45%), Postives = 76/110 (69.09%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALE 331
            L WN R +IA GAA GL YLHE      IHRD+K+AN+LLD+   A + DFGLA+  +  + + +T+ + GT  ++APE L  G+ + K+D++ FG++LLE+ITG+ A++
Sbjct:  284 LSWNMRCKIAQGAANGLSYLHENHH---IHRDIKSANILLDEDFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVD 389          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y5392_ARATH (Probable receptor-like protein kinase At5g39020 OS=Arabidopsis thaliana GN=At5g39020 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 7.916e-19
Identity = 61/169 (36.09%), Postives = 90/169 (53.25%), Query Frame = 2
Query:   29 IAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDD-FCEAIVGDFGLAKLLDHSDSHVTTA-VRGTVGHIAPEYLST--GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKCPK 523
            IA+G ARGL YLH  C  +I+H D+K  N+LLDD FC   V DFGLAKL +  +S ++    RGT+G+IAPE +S   G  S K+DV+ +G+L+L++I     +E            +W                E+    ++I V +++ V+L C +  P  RP   K
Sbjct:  596 IALGIARGLEYLHYGCKTRIVHFDIKPQNILLDDNFCPK-VADFGLAKLCEKRESILSLIDTRGTIGYIAPEVVSRMYGGISHKSDVYSYGMLVLDMIGARNKVETTTCNGSTAYFPDWIYKDLENGDQTWIIGDEINEEDNKI-VKKMILVSLWCIRPCPSDRPPMNK 762          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y5815_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g58150 OS=Arabidopsis thaliana GN=At5g58150 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.034e-18
Identity = 53/167 (31.74%), Postives = 79/167 (47.31%), Query Frame = 2
Query:   11 WNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            W  R +IA+G AR L +LH  C P ++H +VKAA +LLD   E  + DFGL KLLD              G+  PE       + ++DV+ FG++LLEL++G +          +G ++ W              D  +       E+ E +++  LCT  LP  RP
Sbjct:  616 WRLRHKIALGTARALAFLHHGCIPPMVHGEVKAATILLDSSQEPRLADFGLVKLLDEQ----FPGSESLDGYTPPEQERNASPTLESDVYSFGVVLLELVSGKK---------PEGDLVNWVRGLVRQGQGLRAIDPTMQETVPEDEIAEAVKIGYLCTADLPWKRP 769          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.034e-18
Identity = 65/173 (37.57%), Postives = 92/173 (53.18%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML-EWXXXXXXXXXXXXXXDRELGS--NYDRIEVGEILQVALLCTQYLPVHRPK 514
            L+W+ R RIAIGAARGL YLH Q      H ++K++N+LL    +A V DFGLA+L+  S ++   A     G+ APE     + S+K DV+ FG++LLELITG         +N++G  L  W              D EL S    +   + E++Q+ L CT   P  RP+
Sbjct:  466 LNWDVRSRIAIGAARGLDYLHSQ-GTSTSHGNIKSSNILLTKSHDAKVSDFGLAQLVGSSATNPNRA----TGYRAPEVTDPKRVSQKGDVYSFGVVLLELITG--KAPSNSVMNEEGVDLPRWVKSVARDEWRREVFDSELLSLATDEEEMMAEMVQLGLECTSQHPDQRPE 631          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y4361_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.350e-18
Identity = 60/177 (33.90%), Postives = 94/177 (53.11%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDREL------GSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L+W  R  IA+G ARGL +LH+     ++H D+K  NVL D   EA + DFGL +L   S S   VT    GT+G+++PE   +G+ + ++D++ FGI+LLE++TG R + F     Q   +++W              +  L       S ++   +G  ++V LLCT   P+ RP
Sbjct:  938 LNWPMRHLIALGIARGLGFLHQS---NMVHGDIKPQNVLFDADFEAHISDFGLDRLTIRSPSRSAVTANTIGTLGYVSPEATLSGEITRESDIYSFGIVLLEILTGKRPVMF----TQDEDIVKWVKKQLQRGQVTELLEPGLLELDPESSEWEEFLLG--IKVGLLCTATDPLDRP 1105          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.303e-18
Identity = 53/170 (31.18%), Postives = 85/170 (50.00%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEW-XXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L WNTR RIA+G AR + YLHE C P ++H+++K++N+LLD      + D+GL+K       ++ T+     G+ APE       + K+DV+ FG+++LEL+TG    + G+    + +++ W               D  L   Y    +     +  LC Q  P  RP
Sbjct:  501 LTWNTRVRIALGTARAVEYLHEACSPSVMHKNIKSSNILLDADLNPRLSDYGLSKF------YLRTSQNLGEGYNAPEARDPSAYTPKSDVYSFGVVMLELLTGRVPFD-GEKPRPERSLVRWATPQLHDIDALSNIADPALHGLYPPKSLSRFADIIALCVQVEPEFRP 663          
The following BLAST results are available for this feature:
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
Y1839_ARATH4.641e-1943.64Probable serine/threonine-protein kinase At1g18390... [more]
Y5168_ARATH6.061e-1934.12Probably inactive receptor-like protein kinase At5... [more]
Y2267_ARATH6.061e-1937.21Probable inactive receptor kinase At2g26730 OS=Ara... [more]
SRF1_ARATH6.061e-1934.12Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]
IRAK4_BOVIN6.061e-1945.45Interleukin-1 receptor-associated kinase 4 OS=Bos ... [more]
Y5392_ARATH7.916e-1936.09Probable receptor-like protein kinase At5g39020 OS... [more]
Y5815_ARATH1.034e-1831.74Probably inactive leucine-rich repeat receptor-lik... [more]
Y1848_ARATH1.034e-1837.57Probable inactive receptor kinase At1g48480 OS=Ara... [more]
Y4361_ARATH1.350e-1833.90Probable LRR receptor-like serine/threonine-protei... [more]
SRF5_ARATH2.303e-1831.18Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00580 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00580 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623489 ID=BQ623489; Name=BQ623489; organism=Citrus sinensis; type=EST; length=525bp
GGCATTAGATTGGAACACTAGGAAGAGGATAGCAATTGGAGCTGCAAGGG
GTCTGTTATACCTACATGAGCAATGTGATCCAAAGATAATCCACAGAGAT
GTGAAGGCTGCTAATGTGCTTCTGGATGACTTCTGTGAGGCTATAGTTGG
TGACTTTGGCCTTGCAAAGCTTCTTGATCACTCCGACTCTCATGTGACTA
CTGCTGTCCGCGGTACTGTTGGTCATATAGCGCCTGAGTATCTCTCCACT
GGCCAGTCATCTGAGAAAACTGACGTGTTTGGATTTGGCATTCTCTTGTT
GGAGCTCATTACTGGAATGAGAGCTCTTGAGTTTGGCAAGTCTATTAATC
AGAAAGGAGCCATGCTTGAGTGGGTGAAGAAAATTCAGCAGGAAAAGAAA
GTAGAAGTGTTGGTGGACCGAGAGCTTGGAAGCAACTATGACCGGATTGA
GGTTGGAGAGATTCTTCAAGTGGCTTTGCTATGCACTCAATACCTTCCAG
TCCACCGCCCCAAATGTCCGAAGTG
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