BQ623489

Overview
NameBQ623489
Unique NameBQ623489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: PUB52_ARATH (U-box domain-containing protein 52 OS=Arabidopsis thaliana GN=PUB52 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.635e-14
Identity = 43/113 (38.05%), Postives = 66/113 (58.41%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVR-----GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRAL 328
            + W  R RIA+  A  L++LH+     IIHRD+K  N+LLD    + +GD GL+ +++  D    T  +     GT+ +I PEY  TG  S K+DV+  G+++L+LIT   A+
Sbjct:  581 IPWFERFRIALEVASALVFLHKSKPRPIIHRDLKPGNILLDHNFVSKLGDVGLSTMVNQDDVSSRTIFKQTSPVGTLCYIDPEYQRTGIISPKSDVYSLGVVILQLITAKPAI 693          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: GEFX_DICDI (RasGEF domain-containing serine/threonine-protein kinase X OS=Dictyostelium discoideum GN=gefX PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.635e-14
Identity = 40/106 (37.74%), Postives = 63/106 (59.43%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMR 322
            + W+ R  IA+  A+ +++LH +   KIIHRD+K+ N+LLD+F    + DFG A++ + +       + GT G +APE L         DVF +G++L ELITG +
Sbjct:  112 IGWDKRVSIAVDLAKAMVFLHAK---KIIHRDLKSKNILLDEFQRIRLCDFGFARMSEQTKKSRHMTMCGTEGWVAPEILLGMSYDTSCDVFSYGVVLAELITGRK 214          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y5694_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 7.668e-14
Identity = 49/175 (28.00%), Postives = 85/175 (48.57%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRA--LEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKCPK 523
            L W+ R +IA+G A+ L Y+ +   P ++HR++K+AN+ LD   E  + DF L  ++  +             + APE   + +++E  DV+ FG++LLEL+TG  A   E G S      + +               D+++ S+  + ++ + L +AL CT      RP   K
Sbjct:  681 LPWSIRLKIALGVAQALAYISKDYVPHLLHRNLKSANIFLDKDFEPKLSDFALDHIVGETAFQSLVHANTNSCYTAPENHYSKKATEDMDVYSFGVVLLELVTGQSAEKAEEGSSGESLDIVKQVRRKINLTDGAAQVLDQKILSDSCQSDMRKTLDIALDCTAVAAEKRPSLVK 855          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y2165_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana GN=At2g16250 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.001e-13
Identity = 44/107 (41.12%), Postives = 67/107 (62.62%), Query Frame = 2
Query:    2 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE--KTDVFGFGILLLELITG 316
            +LDW TR +IA+GAA GL YLH +C P ++HRDV+A+++LLDD  E  +G   L++     D++ +   R      + E  S+G ++     DV+ FG +LLEL+TG
Sbjct:  625 SLDWITRLKIALGAAEGLSYLHHECSPPLVHRDVQASSILLDDKFEVRLG--SLSEAYAQGDAYQSRISRLLRLPQSSEPSSSGVTNAICSYDVYCFGKVLLELVTG 729          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: SUB_ARATH (Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.308e-13
Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALE 331
            L WN R  IA+GA++ L +LHE C P ++H++ K++ VLLD      V D GLA +L               G+ APE +  G  + ++DVF  G+++LEL+TG R  +
Sbjct:  594 LTWNVRINIALGASKALQFLHEVCQPPVVHQNFKSSKVLLDGKLSVRVADSGLAYMLP------PRPTSQMAGYAAPE-VEYGSYTCQSDVFSLGVVMLELLTGRRPFD 695          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: STPKL_ARATH (Serine/threonine-protein kinase-like protein At5g23170 OS=Arabidopsis thaliana GN=At5g23170 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.708e-13
Identity = 43/121 (35.54%), Postives = 69/121 (57.02%), Query Frame = 2
Query:   11 WNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEW 373
            W  R  IA+  A  + +LHE     IIHRD+K+ N+L D   EA + DFGLA      D  +  A  GT+G++ P Y      S KTDV+ +G++LLE+++  +A++  +S     ++++W
Sbjct:  127 WLKRIEIALQIASAVHFLHEH---GIIHRDIKSENILFDSNWEAKLADFGLAVDFG-GDKKIRPAPAGTIGYLDPCYTLPENLSMKTDVYSYGVVLLEIVSCRKAIDVSRS---PASIVDW 240          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y4372_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g37250 OS=Arabidopsis thaliana GN=At4g37250 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.914e-13
Identity = 51/135 (37.78%), Postives = 71/135 (52.59%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV--------------TTAVR-------------GTVG----HIAPEYLSTGQSSEKTDVFGFGILLLELITG 316
            L W TR +IA G ARGL YLHE+   K +H ++K +N+LL    E  +GDFGL +LL    S++              TT+ R              +VG    + APE   + + S K DV+GFG++LLEL+TG
Sbjct:  549 LPWETRLKIAKGIARGLAYLHEK---KHVHGNLKPSNILLGHDMEPKIGDFGLERLLTGETSYIRAGGSSRIFSSKRYTTSSREFSSIGPTPSPSPSSVGAMSPYCAPESFRSLKPSPKWDVYGFGVILLELLTG 680          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: PUB34_ARATH (U-box domain-containing protein 34 OS=Arabidopsis thaliana GN=PUB34 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.914e-13
Identity = 50/177 (28.25%), Postives = 86/177 (48.59%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL-----DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSIN---QKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L W  R R+    A GL +LH      I+HRD+K  N+LL+    + + D GLAKL+     D+   +  + + GT+ +I PEY  TG    K+D++ FGI++L+L+T         ++    +KG + E               D+ + +++   E  E+ ++ L C ++    RP
Sbjct:  533 LPWFIRFRVIFEVACGLAFLHSSKPEPIVHRDLKPGNILLNRNYVSKIADVGLAKLVTDVAPDNVTMYRNSVLAGTLHYIDPEYHRTGTIRPKSDLYAFGIIILQLLTARNPSGIVPAVENAVKKGTLTE-------------MLDKSV-TDWPLAETEELARIGLKCAEFRCRDRP 695          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: YR826_MIMIV (Putative serine/threonine-protein kinase/receptor R826 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R826 PE=4 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 3.805e-13
Identity = 38/103 (36.89%), Postives = 60/103 (58.25%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 313
            L+W+ + +I +  A+G+ YLH   DP IIHRD+K +N+L+D+     + DFG A++    + +      GT    APE +      EK DVF FGI++ E++T
Sbjct: 1492 LEWHQKIKILVNIAKGISYLHS-FDPPIIHRDIKPSNILIDENWNVKIADFGFARI---KEENAIMTRCGTPCWTAPEIIRNDIYDEKVDVFSFGIVMWEVLT 1590          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: SPKA_DICDI (Stress-activated protein kinase alpha OS=Dictyostelium discoideum GN=spkA-1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.477e-13
Identity = 40/103 (38.83%), Postives = 59/103 (57.28%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 313
            + W    R AI   RG+  LH+  DP I+HRD+K+ N+L++D  E  V DFGL++    S+      +RGT  + APE     Q S K+DV+   ++L EL+T
Sbjct:  442 IGWERTFRFAIETVRGIECLHKW-DPPIVHRDLKSLNLLVNDKWEIKVCDFGLSRFNTGSNLETLVKMRGTFAYCAPEVYYGEQFSGKSDVYSIAVILWELVT 543          
The following BLAST results are available for this feature:
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PUB52_ARATH2.635e-1438.05U-box domain-containing protein 52 OS=Arabidopsis ... [more]
GEFX_DICDI2.635e-1437.74RasGEF domain-containing serine/threonine-protein ... [more]
Y5694_ARATH7.668e-1428.00Probably inactive leucine-rich repeat receptor-lik... [more]
Y2165_ARATH1.001e-1341.12Probable LRR receptor-like serine/threonine-protei... [more]
SUB_ARATH1.308e-1337.61Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB ... [more]
STPKL_ARATH1.708e-1335.54Serine/threonine-protein kinase-like protein At5g2... [more]
Y4372_ARATH2.914e-1337.78Probable LRR receptor-like serine/threonine-protei... [more]
PUB34_ARATH2.914e-1328.25U-box domain-containing protein 34 OS=Arabidopsis ... [more]
YR826_MIMIV3.805e-1336.89Putative serine/threonine-protein kinase/receptor ... [more]
SPKA_DICDI8.477e-1338.83Stress-activated protein kinase alpha OS=Dictyoste... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00580 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00580 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623489 ID=BQ623489; Name=BQ623489; organism=Citrus sinensis; type=EST; length=525bp
GGCATTAGATTGGAACACTAGGAAGAGGATAGCAATTGGAGCTGCAAGGG
GTCTGTTATACCTACATGAGCAATGTGATCCAAAGATAATCCACAGAGAT
GTGAAGGCTGCTAATGTGCTTCTGGATGACTTCTGTGAGGCTATAGTTGG
TGACTTTGGCCTTGCAAAGCTTCTTGATCACTCCGACTCTCATGTGACTA
CTGCTGTCCGCGGTACTGTTGGTCATATAGCGCCTGAGTATCTCTCCACT
GGCCAGTCATCTGAGAAAACTGACGTGTTTGGATTTGGCATTCTCTTGTT
GGAGCTCATTACTGGAATGAGAGCTCTTGAGTTTGGCAAGTCTATTAATC
AGAAAGGAGCCATGCTTGAGTGGGTGAAGAAAATTCAGCAGGAAAAGAAA
GTAGAAGTGTTGGTGGACCGAGAGCTTGGAAGCAACTATGACCGGATTGA
GGTTGGAGAGATTCTTCAAGTGGCTTTGCTATGCACTCAATACCTTCCAG
TCCACCGCCCCAAATGTCCGAAGTG
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