BQ623489

Overview
NameBQ623489
Unique NameBQ623489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: ROCO7_DICDI (Probable serine/threonine-protein kinase roco7 OS=Dictyostelium discoideum GN=roco7 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.207e-12
Identity = 49/129 (37.98%), Postives = 72/129 (55.81%), Query Frame = 2
Query:   11 WNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLD----DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV----GHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEW 373
            W T  ++AI  A+G+ +LH  C P I+HRD+K+AN+LL     D   A VGDFGL      S   +   V+G        +APE +  GQ +EK D++ + I+L E+IT  R L F + ++Q    L+W
Sbjct: 1871 WGTVLKLAIDVAKGMNFLHS-CKPMIVHRDLKSANILLGGSSMDNLVAKVGDFGL------SIKPIGKEVKGRKVWNWRWLAPECMGDGQYTEKIDIYSYAIVLWEIIT--RDLPFEEYVDQ----LKW 1986          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: M313B_XENLA (Mitogen-activated protein kinase kinase kinase 13-B OS=Xenopus laevis GN=map3k13-B PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.207e-12
Identity = 43/104 (41.35%), Postives = 59/104 (56.73%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 316
            ++W+T      G A G+ YLH     KIIHRD+K+ NVL+       + DFG +K L  SD     +  GTV  +APE +     SEK D++ FG+LL EL+TG
Sbjct:  260 VEWST------GIASGMNYLHLH---KIIHRDLKSPNVLVTHADTVKISDFGTSKEL--SDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVLLWELLTG 352          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: YR818_MIMIV (Putative serine/threonine-protein kinase/receptor R818 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R818 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.495e-12
Identity = 39/102 (38.24%), Postives = 61/102 (59.80%), Query Frame = 2
Query:    8 DWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 313
            +W  + ++    A G+ YLH   DP IIHRD+K +N+L+DD     + DFG A++ +  ++ V T   GT    APE +   + +EK DVF FGI++ E++T
Sbjct: 1486 EWKLKIKMLYQTALGIGYLHNS-DPIIIHRDIKPSNILVDDSMNVKIADFGFARIKE--ENSVMTRC-GTPCWTAPEIIRGEKYTEKVDVFSFGIVMWEVLT 1583          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: M313A_XENLA (Mitogen-activated protein kinase kinase kinase 13-A OS=Xenopus laevis GN=map3k13-A PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.495e-12
Identity = 43/104 (41.35%), Postives = 58/104 (55.77%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 316
            +DW+       G A G+ YLH     KIIHRD+K+ NVL+       + DFG +K L  SD     +  GTV  +APE +     SEK D++ FG+LL EL+TG
Sbjct:  258 VDWSN------GIASGMNYLHLH---KIIHRDLKSPNVLVTHTDTVKISDFGTSKEL--SDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVLLWELLTG 350          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: ACCR1_ARATH (Serine/threonine-protein kinase-like protein CCR1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.177e-12
Identity = 39/106 (36.79%), Postives = 57/106 (53.77%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMR 322
            L W+ R +IA+  A+GL YLH + +P+IIH DVK++NVLLD    A V DFGL    +  +  +                       K DV+ FG++LLE++TG +
Sbjct:  614 LSWSLRIKIAMQTAKGLEYLHNEAEPRIIHGDVKSSNVLLDSEWVARVADFGLVTSSNEKNLDI-----------------------KRDVYDFGVVLLEILTGRK 696          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: KINX_DICDI (Probable serine/threonine-protein kinase kinX OS=Dictyostelium discoideum GN=kinX PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 9.373e-12
Identity = 36/106 (33.96%), Postives = 66/106 (62.26%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMR 322
            L W  R  IA+  +  + YLH +    I+HRD+K+ N+L+D   +  V DFG A++++  D++ +  + GT   ++PE ++     E++D+F FGI+LLE+I+ ++
Sbjct:  118 LPWFLRANIALDVSLAMSYLHSK---SIVHRDLKSTNLLVDKNWKIKVCDFGFARIVEE-DNNKSMTICGTDNWMSPEMITGLDYDERSDIFSFGIVLLEIISRVK 219          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: DRKA_DICDI (Probable serine/threonine-protein kinase drkA OS=Dictyostelium discoideum GN=drkA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 9.373e-12
Identity = 39/103 (37.86%), Postives = 60/103 (58.25%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 313
            L W+   ++ I AA+G++YLH    P I+HRD+K+ N+L+D+  +  V DFGL+ +        T    GT    +PE L + + +EK DV+ FGI+L E  T
Sbjct:  467 LQWSLLIKMMIDAAKGVIYLHNST-PVILHRDLKSHNLLVDENWKVKVADFGLSTI---EQQGATMTACGTPCWTSPEVLRSQRYTEKADVYSFGIILWECAT 565          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CTR1_ARATH (Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 9.373e-12
Identity = 42/103 (40.78%), Postives = 62/103 (60.19%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 313
            LD   R  +A   A+G+ YLH + +P I+HRD+K+ N+L+D      V DFGL++L   S    + +  GT   +APE L    S+EK+DV+ FG++L EL T
Sbjct:  646 LDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL-KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 746          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y1061_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At1g50610 OS=Arabidopsis thaliana GN=At1g50610 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.599e-11
Identity = 48/167 (28.74%), Postives = 86/167 (51.50%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKII-HRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL-STGQS-SEKTDVFGFGILLLELITGMRALEF-GKSINQKGAMLEWXXXXXXXXXXXXXXDREL-GSNYDRIEVGEILQVALLCTQ 490
            LDW TR +I  G A+GL YL ++     I H  +K++N++LDD  E ++ D+ L  ++    +H          + +PEY  S GQ  ++KTDV+ FG+L+LE++TG     +  +  +   +++ W              D+E+ G    + E+  +L++ L C +
Sbjct:  468 LDWITRLKIIKGVAKGLSYLFDELPTLTIPHGHMKSSNIVLDDSFEPLLTDYALRPMMSSEHAH-----NFMTAYKSPEYRPSKGQIITKKTDVWCFGVLILEVLTGRFPENYLTQGYDSNMSLVTWVNDMVKEKKTGDVFDKEMKGKKNCKAEMINLLKIGLRCCE 629          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y9871_DICDI (Probable serine/threonine-protein kinase DDB_G0271682 OS=Dictyostelium discoideum GN=DDB_G0271682 PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.088e-11
Identity = 37/103 (35.92%), Postives = 58/103 (56.31%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 313
            L  + + ++ I  A+G+ YLH    P IIHRD+K+ N+L+D+     V DFGL++ +            GT+  IAPE  +    + K DV+ FGI+L E++T
Sbjct:  454 LSLSVKVKMLIDVAQGMNYLHTY-SPPIIHRDLKSLNLLVDNNFNVKVSDFGLSRFISGGIGSSAKTFCGTLSWIAPEVFNGSGYTTKVDVYSFGIVLWEILT 555          
The following BLAST results are available for this feature:
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
ROCO7_DICDI4.207e-1237.98Probable serine/threonine-protein kinase roco7 OS=... [more]
M313B_XENLA4.207e-1241.35Mitogen-activated protein kinase kinase kinase 13-... [more]
YR818_MIMIV5.495e-1238.24Putative serine/threonine-protein kinase/receptor ... [more]
M313A_XENLA5.495e-1241.35Mitogen-activated protein kinase kinase kinase 13-... [more]
ACCR1_ARATH7.177e-1236.79Serine/threonine-protein kinase-like protein CCR1 ... [more]
KINX_DICDI9.373e-1233.96Probable serine/threonine-protein kinase kinX OS=D... [more]
DRKA_DICDI9.373e-1237.86Probable serine/threonine-protein kinase drkA OS=D... [more]
CTR1_ARATH9.373e-1240.78Serine/threonine-protein kinase CTR1 OS=Arabidopsi... [more]
Y1061_ARATH1.599e-1128.74Probably inactive leucine-rich repeat receptor-lik... [more]
Y9871_DICDI2.088e-1135.92Probable serine/threonine-protein kinase DDB_G0271... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00580 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00580 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623489 ID=BQ623489; Name=BQ623489; organism=Citrus sinensis; type=EST; length=525bp
GGCATTAGATTGGAACACTAGGAAGAGGATAGCAATTGGAGCTGCAAGGG
GTCTGTTATACCTACATGAGCAATGTGATCCAAAGATAATCCACAGAGAT
GTGAAGGCTGCTAATGTGCTTCTGGATGACTTCTGTGAGGCTATAGTTGG
TGACTTTGGCCTTGCAAAGCTTCTTGATCACTCCGACTCTCATGTGACTA
CTGCTGTCCGCGGTACTGTTGGTCATATAGCGCCTGAGTATCTCTCCACT
GGCCAGTCATCTGAGAAAACTGACGTGTTTGGATTTGGCATTCTCTTGTT
GGAGCTCATTACTGGAATGAGAGCTCTTGAGTTTGGCAAGTCTATTAATC
AGAAAGGAGCCATGCTTGAGTGGGTGAAGAAAATTCAGCAGGAAAAGAAA
GTAGAAGTGTTGGTGGACCGAGAGCTTGGAAGCAACTATGACCGGATTGA
GGTTGGAGAGATTCTTCAAGTGGCTTTGCTATGCACTCAATACCTTCCAG
TCCACCGCCCCAAATGTCCGAAGTG
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