BQ623489

Overview
NameBQ623489
Unique NameBQ623489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.455e-28
Identity = 63/169 (37.28%), Postives = 94/169 (55.62%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            +DW TR +I  G A+GL +LHE+   K +HRD+KA N+LLD      + DFGLA+L +   +H++T V GT+G++APEY   G  + K DV+ FG+L+LE++ G+    F         +LE+              D  L    DR E   +++VAL+C+   P  RP
Sbjct:  776 MDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISDFGLARLDEEEKTHISTKVAGTIGYMAPEYALWGYLTFKADVYSFGVLVLEIVAGITNSNF-MGAGDSVCLLEFANECVESGHLMQVVDERLRPEVDRKEAEAVIKVALVCSSASPTDRP 943          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 4.188e-28
Identity = 74/174 (42.53%), Postives = 104/174 (59.77%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEW-XXXXXXXXXXXXXXDRELGSNYDRI--EVGEILQVALLCTQYLPVHRP 511
            LDW TR +IAIGAA+GL YLH  C P I+HRDVK  N+LLD   EAI+ DFGLAKL+ +S ++    + V G+ G+IAPEY  T   +EK+DV+ +G++LLE+++G  A+E    I     ++EW               D +L    D+I  E+ + L +A+ C    PV RP
Sbjct:  869 LDWETRYKIAIGAAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAILADFGLAKLMMNSPNYHNAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVE--PQIGDGLHIVEWVKKKMGTFEPALSVLDVKLQGLPDQIVQEMLQTLGIAMFCVNPSPVERP 1040          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 4.188e-28
Identity = 69/170 (40.59%), Postives = 96/170 (56.47%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL-DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW TR  IA+GAARGL YLH      +IHRDVK++N+LLD    A V DFG +K      DS+V+  VRGT G++ PEY  T Q SEK+DVF FG++LLE+++G   L   K    + +++EW              D  +   Y    +  +++VAL C +    +RP
Sbjct:  690 LDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNI-KRPRVEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRP 858          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 4.188e-28
Identity = 69/170 (40.59%), Postives = 96/170 (56.47%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL-DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW TR  IA+GAARGL YLH      +IHRDVK++N+LLD    A V DFG +K      DS+V+  VRGT G++ PEY  T Q SEK+DVF FG++LLE+++G   L   K    + +++EW              D  +   Y    +  +++VAL C +    +RP
Sbjct:  691 LDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNI-KRPRIEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRP 859          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 5.469e-28
Identity = 67/170 (39.41%), Postives = 100/170 (58.82%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDWNTR +IA GAARGL YLH++  P +I+RD+K +N+LL +  +  + DFGLAK+    D +HV+T V GT G+ AP+Y  TGQ + K+D++ FG++LLELITG +A++  K+   +  +                 D  L   Y    + + L ++ +C Q  P  RP
Sbjct:  199 LDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRP 368          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 7.143e-28
Identity = 65/170 (38.24%), Postives = 98/170 (57.65%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAK-LLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L+W TR +I I +A+GL YLH  C P ++HRDVK  N+LL++  EA + DFGL++  L   ++HV+T V GT G++ PEY  T   +EK+DV+ FGILLLE+IT    ++  +   +K  + EW              D  L  +YD   V + +++A+ C  +    RP
Sbjct:  672 LNWGTRLKIVIESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVSTVVAGTPGYLDPEYHRTNWLTEKSDVYSFGILLLEIITNRHVIDQSR---EKPHIGEWVGVMLTKGDIQSIMDPSLNEDYDSGSVWKAVELAMSCLNHSSARRP 838          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 7.143e-28
Identity = 67/173 (38.73%), Postives = 102/173 (58.96%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMR---ALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPK 514
            LDW TR +IA  AA+GL YLH  C+P IIHRDVK++N+LLD    A V DFGL++  +   +HV++  +GTVG++ PEY ++ Q +EK+DV+ FG++L EL++G +   A +FG  +N    ++ W              D  + SN     V  + +VA  C +    +RP+
Sbjct:  700 LDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELN----IVHWARSLIRKGDVCGIIDPCIASNVKIESVWRVAEVANQCVEQRGHNRPR 868          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 9.330e-28
Identity = 68/171 (39.77%), Postives = 98/171 (57.31%), Query Frame = 2
Query:    2 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            ALDWN R +IA GAA+GL +LH++ +P +I+RD K++N+LLD+     + DFGLAKL    D SHV+T V GT G+ APEY  TGQ + K+DV+ FG++ LELITG +A++      ++  +                 D  L   +    + + L VA +C Q     RP
Sbjct:  181 ALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLVAWARPLFNDRRKFIKLADPRLKGRFPTRALYQALAVASMCIQEQAATRP 351          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 9.330e-28
Identity = 63/170 (37.06%), Postives = 97/170 (57.06%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            ++W  R RIA+ AA GL YLH  C P I+HRD+K  N+LLD+  +A + DFGL++      ++H++T V GT G++ PEY  T +  EK+DV+ FGI+LLE+IT    ++  +S   K  + +W              D  L  +Y+   V  +L++A+ C     V+RP
Sbjct:  673 INWGNRLRIALEAALGLEYLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGETHISTVVAGTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEIITNQPVIDQSRS---KSHISQWVGFELTRGDITKIMDPNLNGDYESRSVWRVLELAMSCANPSSVNRP 839          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 9.330e-28
Identity = 65/170 (38.24%), Postives = 94/170 (55.29%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW TR  I  G  RG+LYLH+     IIHRD+KA N+LLD      + DFG+A+      +  TT  V GT G++ PEY++ GQ S K+DV+ FG+L+LE+I G ++  F +     G ++ +              D  +G +YD+ EV   + ++LLC Q  P  RP
Sbjct:  429 LDWRTRYNIIRGVTRGILYLHQDSRLTIIHRDLKAGNILLDVDMNPKIADFGVARNFRVDQTEATTGRVVGTFGYMPPEYVANGQFSMKSDVYSFGVLILEIIVGKKSSSFHEIDGSVGNLVTYVWRLWNNESFLELVDPAMGESYDKDEVIRCIHISLLCVQENPADRP 598          
The following BLAST results are available for this feature:
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
RKF1_ARATH2.455e-2837.28Probable LRR receptor-like serine/threonine-protei... [more]
Y1341_ARATH4.188e-2842.53Probable LRR receptor-like serine/threonine-protei... [more]
NORK_PEA4.188e-2840.59Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
NORK_MEDTR4.188e-2840.59Nodulation receptor kinase OS=Medicago truncatula ... [more]
RLCK7_ARATH5.469e-2839.41Probable serine/threonine-protein kinase RLCKVII O... [more]
Y5182_ARATH7.143e-2838.24Probable LRR receptor-like serine/threonine-protei... [more]
Y1677_ARATH7.143e-2838.73Probable LRR receptor-like serine/threonine-protei... [more]
PBS1_ARATH9.330e-2839.77Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
PAM74_ARATH9.330e-2837.06Probable LRR receptor-like serine/threonine-protei... [more]
CRK16_ARATH9.330e-2838.24Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00580 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00580 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623489 ID=BQ623489; Name=BQ623489; organism=Citrus sinensis; type=EST; length=525bp
GGCATTAGATTGGAACACTAGGAAGAGGATAGCAATTGGAGCTGCAAGGG
GTCTGTTATACCTACATGAGCAATGTGATCCAAAGATAATCCACAGAGAT
GTGAAGGCTGCTAATGTGCTTCTGGATGACTTCTGTGAGGCTATAGTTGG
TGACTTTGGCCTTGCAAAGCTTCTTGATCACTCCGACTCTCATGTGACTA
CTGCTGTCCGCGGTACTGTTGGTCATATAGCGCCTGAGTATCTCTCCACT
GGCCAGTCATCTGAGAAAACTGACGTGTTTGGATTTGGCATTCTCTTGTT
GGAGCTCATTACTGGAATGAGAGCTCTTGAGTTTGGCAAGTCTATTAATC
AGAAAGGAGCCATGCTTGAGTGGGTGAAGAAAATTCAGCAGGAAAAGAAA
GTAGAAGTGTTGGTGGACCGAGAGCTTGGAAGCAACTATGACCGGATTGA
GGTTGGAGAGATTCTTCAAGTGGCTTTGCTATGCACTCAATACCTTCCAG
TCCACCGCCCCAAATGTCCGAAGTG
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