BQ623489

Overview
NameBQ623489
Unique NameBQ623489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.119e-26
Identity = 66/169 (39.05%), Postives = 97/169 (57.40%), Query Frame = 2
Query:   20 RKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL-----DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            R RIA+G+ARG+LYLH + DP IIHRD+K +N+LLD      V DFG++KL+          HVTT V+GT G++ PEY  + + +EK+DV+  GI+ LE++TGMR +  G++I ++                    DR +G  Y    V   +++A+ C Q  P  RP
Sbjct:  729 RLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVTTIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTGMRPISHGRNIVRE------VNEACDAGMMMSVIDRSMG-QYSEECVKRFMELAIRCCQDNPEARP 890          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.119e-26
Identity = 61/170 (35.88%), Postives = 95/170 (55.88%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L W++R +I +  A+GL YLH  C P ++HRDVK  N+LLD+  +A + DFGL++      ++HV+TAV GT G++ PEY  T + +EK+DV+ FGI+LLE+IT    ++      +K  +  W              D  L  +Y+   V + L++A+ C       RP
Sbjct:  667 LKWSSRLKIVVETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPVGGETHVSTAVAGTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIITSRPVIQ---QTREKPHIAAWVGYMLTKGDIENVVDPRLNRDYEPTSVWKALEIAMSCVNPSSEKRP 833          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 5.119e-26
Identity = 64/178 (35.96%), Postives = 102/178 (57.30%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD---HSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRI------EVGEILQVALLCTQYLPVHRP 511
            L W TR +IA+G A+G+ YLH  C P I+HRD+K++NVLLD   EA +GDFGLAK+L     +++   T   G+ G+IAPEY  + +++EK+DV+  GI+L+E++TG    E     +++  M+ W              ++ + S    +         ++L++AL CT+  P  RP
Sbjct: 1048 LGWETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIEAHLGDFGLAKILTGNYDTNTESNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTE--AMFDEETDMVRWVETVLDTPPGSEAREKLIDSELKSLLPCEEEAAYQVLEIALQCTKSYPQERP 1223          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 6.686e-26
Identity = 63/170 (37.06%), Postives = 95/170 (55.88%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L W  R RIA   A+GL YLH  C P +IHRD+K+ N+LLD+  +A +GDFGL++     S++HV+T V G+ G++ PEY  T   +EK+DVF FG++LLE+IT    ++      +K  + EW              D  +  +YD   + + L++A+ C       RP
Sbjct:  685 LSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVID---QTREKSHIGEWVGFKLTNGDIKNIVDPSMNGDYDSSSLWKALELAMSCVSPSSSGRP 851          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 6.686e-26
Identity = 64/170 (37.65%), Postives = 94/170 (55.29%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            + W  R  IA+ AA GL YLH  C P I+HRDVK++N+LLDD  +A + DFGL++     D SHV+T V GT G++  EY  T + SEK+DV+ FG++LLE+IT    ++  + +     + EW              D +L   YD     + L++A+ C     + RP
Sbjct:  661 ISWVDRLNIAVDAASGLEYLHIGCKPLIVHRDVKSSNILLDDQLQAKLADFGLSRSFPIGDESHVSTLVAGTFGYLDHEYYQTNRLSEKSDVYSFGVVLLEIITNKPVIDHNRDMPH---IAEWVKLMLTRGDISNIMDPKLQGVYDSGSAWKALELAMTCVNPSSLKRP 827          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 6.686e-26
Identity = 66/172 (38.37%), Postives = 98/172 (56.98%), Query Frame = 2
Query:    2 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRI-EVGEILQVALLCTQYLPVHRPK 514
            +L W  R RIAI  A  L YLH      IIHRD+K AN+LLD+   A V DFG +KL+      +TT V+GT+G++ PEY +TG  +EK+DV+ FG++L+EL++G +AL F +    K  +  +              D+ L  N D + E+ E  ++A  CT+ +   RP+
Sbjct:  508 SLTWEHRLRIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASKLIPMDKEQLTTMVQGTLGYLDPEYYTTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQASKHLVSYFVSATEENRLHEIIDDQVL--NEDNLKEIQEAARIAAECTRLMGEERPR 677          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 6.686e-26
Identity = 60/169 (35.50%), Postives = 96/169 (56.80%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW  R  I  GA+ GL Y+H+ C+P I+HRD+K++N+LLD   +A V DFGL++L+    +HVTT + GT+G+I PEY     ++ + DV+ FG+++LEL+TG R +E  +       ++ W              D  L  + +   +  +L +A +C    P+ RP
Sbjct:  898 LDWPKRLNIMRGASSGLAYMHQICEPHIVHRDIKSSNILLDGNFKAYVADFGLSRLILPYRTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGKRPMEVFRP-KMSRELVAWVHTMKRDGKPEEVFDTLLRESGNEEAMLRVLDIACMCVNQNPMKRP 1065          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 6.686e-26
Identity = 71/181 (39.23%), Postives = 100/181 (55.25%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEW-----------XXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW+ R  +A+G A GL YLH  C P I+HRD+K  N+L+D   E  +GDFGLA+LLD  DS V+TA V GT G+IAPE         ++DV+ +G++LLEL+T  RA++  KS  +   ++ W                         D  L S+  R +V ++ ++AL CTQ  P  RP
Sbjct:  923 LDWSARYNVALGVAHGLAYLHYDCHPPIVHRDIKPENILMDSDLEPHIGDFGLARLLD--DSTVSTATVTGTTGYIAPENAFKTVRGRESDVYSYGVVLLELVTRKRAVD--KSFPESTDIVSWVRSALSSSNNNVEDMVTTIVDPILVDELLDSSL-REQVMQVTELALSCTQQDPAMRP 1098          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 8.732e-26
Identity = 67/170 (39.41%), Postives = 93/170 (54.71%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L W  R  IA+  A GL YLH  C P ++HRDVK+ N+LLD+  +A + DFGL++      +SHV+T V GT G++ PEY  T + +EK+DV+ FGI+LLE+IT    LE     N+   + E               D  L   YD   V + L++A+ C    PV RP
Sbjct:  667 LKWENRLSIAVETALGLEYLHSGCKPLMVHRDVKSMNILLDEHFQAKLADFGLSRSFSVGEESHVSTGVVGTPGYLDPEYYRTYRLTEKSDVYSFGIVLLEIITNQPVLE---QANENRHIAERVRTMLTRSDISTIVDPNLIGEYDSGSVRKALKLAMSCVDPSPVARP 833          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 8.732e-26
Identity = 61/170 (35.88%), Postives = 94/170 (55.29%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L+W TR +I + +A+GL YLH  C P ++HRDVK  N+LL++   A + DFGL++      ++HV+T V GT G++ PEY  T   +EK+DV+ FGI+LLE+IT    +   +   +K  + EW              D +L  +YD   V   +++A+ C       RP
Sbjct:  686 LNWETRLKIVVESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVSTVVAGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQLVINQSR---EKPHIAEWVGLMLTKGDIQNIMDPKLYGDYDSGSVWRAVELAMSCLNPSSARRP 852          
The following BLAST results are available for this feature:
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
Y5374_ARATH5.119e-2639.05Probable LRR receptor-like serine/threonine-protei... [more]
Y2289_ARATH5.119e-2635.88Probable LRR receptor-like serine/threonine-protei... [more]
GSO2_ARATH5.119e-2635.96LRR receptor-like serine/threonine-protein kinase ... [more]
Y4245_ARATH6.686e-2637.06Probable LRR receptor-like serine/threonine-protei... [more]
Y1756_ARATH6.686e-2637.65Probable LRR receptor-like serine/threonine-protei... [more]
WAK3_ARATH6.686e-2638.37Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
PSYR1_ARATH6.686e-2635.50Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
PEPR1_ARATH6.686e-2639.23Leucine-rich repeat receptor-like protein kinase P... [more]
Y5169_ARATH8.732e-2639.41Probable LRR receptor-like serine/threonine-protei... [more]
RLK6_ARATH8.732e-2635.88Receptor-like protein kinase At3g21340 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00580 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00580 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623489 ID=BQ623489; Name=BQ623489; organism=Citrus sinensis; type=EST; length=525bp
GGCATTAGATTGGAACACTAGGAAGAGGATAGCAATTGGAGCTGCAAGGG
GTCTGTTATACCTACATGAGCAATGTGATCCAAAGATAATCCACAGAGAT
GTGAAGGCTGCTAATGTGCTTCTGGATGACTTCTGTGAGGCTATAGTTGG
TGACTTTGGCCTTGCAAAGCTTCTTGATCACTCCGACTCTCATGTGACTA
CTGCTGTCCGCGGTACTGTTGGTCATATAGCGCCTGAGTATCTCTCCACT
GGCCAGTCATCTGAGAAAACTGACGTGTTTGGATTTGGCATTCTCTTGTT
GGAGCTCATTACTGGAATGAGAGCTCTTGAGTTTGGCAAGTCTATTAATC
AGAAAGGAGCCATGCTTGAGTGGGTGAAGAAAATTCAGCAGGAAAAGAAA
GTAGAAGTGTTGGTGGACCGAGAGCTTGGAAGCAACTATGACCGGATTGA
GGTTGGAGAGATTCTTCAAGTGGCTTTGCTATGCACTCAATACCTTCCAG
TCCACCGCCCCAAATGTCCGAAGTG
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