BQ623496

Overview
NameBQ623496
Unique NameBQ623496
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length631
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9137 contig Csv1_Contig9137:67..698. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: ZFNL_PEA (Zinc finger CCCH domain-containing protein ZFN-like OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.064e-27
Identity = 47/77 (61.04%), Postives = 63/77 (81.82%), Query Frame = 2
Query:  233 FPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPI 463
            FPERP QPEC ++++TGDCK+ + C++HHP+ R   +P C LS  GLPLRPG+ +C +YSRYGICKFGP+CK+DHP+
Sbjct:  275 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERQIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPM 351          

HSP 2 Score: 97.4413 bits (241), Expect = 6.250e-20
Identity = 40/78 (51.28%), Postives = 54/78 (69.23%), Query Frame = 2
Query:  227 GEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            GEFPER GQPEC Y+L+TG CK+ + C++HHPK++   +    L+  G PLRP ++  +YY R G CKFG  CK+ HP
Sbjct:   70 GEFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPNESERAYYLRTGQCKFGNTCKFHHP 147          

HSP 3 Score: 85.8853 bits (211), Expect = 1.882e-16
Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 2
Query:  227 GEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKG-LPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            G +PE PG+P+CSY++RTG C++ + C+++HP NR  K    T   KG  P R GQ  C YY + G CKFG  C++ HP
Sbjct:   25 GPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNR--KLAIATARMKGEFPERLGQPECQYYLKTGTCKFGATCRFHHP 101          
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H5_ORYSJ (Zinc finger CCCH domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=Os01g0257400 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.095e-27
Identity = 68/175 (38.86%), Postives = 88/175 (50.29%), Query Frame = 2
Query:    2 IGSWSSPRALNEPAPFV----PMMYSPTPGVPSQNSEWNGYQSPLYPQ-----ERSVQSAPTYVINNNPLVDNVQIIHQPQMLVGE------------FPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPI 463
            +  W   R    P  F+    P M  P+  VP Q   WN Y SP+         ++VQ+ P Y +++      V    Q   L               FP RPGQPEC Y+L+TG CK+ S CKYHHP+        C LS  GLPLRPG   C+YY+++G CKFGP CK+DHP+
Sbjct:  200 LAGWQMGRPPVLPGSFLSGSYPPMMLPSTVVPMQG--WNPYISPVNQVASAGGHQTVQAGPFYGLSHQGPSAAVTYGSQYAPLSSSTMPSSSSKQEPAFPARPGQPECQYYLKTGSCKFGSACKYHHPQYLNTPKSNCMLSPLGLPLRPGSQPCAYYTQHGFCKFGPTCKFDHPM 372          

HSP 2 Score: 94.3597 bits (233), Expect = 5.291e-19
Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 2
Query:  230 EFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPIHPDASAEYGLDPP 502
            E+PERPGQP C Y+++ G CK+ SNCKY HP+    ++    L+  G PLR G+  C+YY + G CKFG  CK+ HP     S    + PP
Sbjct:   97 EYPERPGQPVCEYYMKNGTCKFGSNCKYDHPREGSVQA--VMLNSSGYPLRSGEKDCTYYVKTGHCKFGSTCKFHHPEIGGVSETPNMYPP 185          

HSP 3 Score: 93.9745 bits (232), Expect = 6.911e-19
Identity = 41/82 (50.00%), Postives = 50/82 (60.98%), Query Frame = 2
Query:  227 GEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNR----IPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            G  PERPG+ +C Y+LRTG C Y  NC+Y+HP++R    +      T      P RPGQ VC YY + G CKFG  CKYDHP
Sbjct:   46 GRLPERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAVLNGGGKTTHSAEYPERPGQPVCEYYMKNGTCKFGSNCKYDHP 127          
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H32_ARATH (Zinc finger CCCH domain-containing protein 32 OS=Arabidopsis thaliana GN=At2g47850 PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 5.279e-27
Identity = 64/169 (37.87%), Postives = 96/169 (56.80%), Query Frame = 2
Query:   38 PAPFVPMMYSP---TPGVPSQNSEWNGYQSPLYPQ-----ERSVQSAPTYVI----NNNPLVDNVQ-IIHQPQMLVGE---FPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPI-----HPDASA 481
            P  ++   Y P   TPGV      W+ Y +P+ P      + +V +   Y +    +  P +  V   +  P  ++ +   FPERPG+PEC Y+L+TGDCK+ ++CK+HHP++R+P    C LS  GLPLRPG   C++Y + G CKFG  CK+DHP+     +P AS+
Sbjct:  206 PGSYMQGAYGPMLLTPGVVPIPG-WSPYSAPVSPALSPGAQHAVGATSLYGVTQLTSTTPSLPGVYPSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHPMGTIRYNPSASS 373          

HSP 2 Score: 95.5153 bits (236), Expect = 2.375e-19
Identity = 42/94 (44.68%), Postives = 58/94 (61.70%), Query Frame = 2
Query:  227 GEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPIHPDASAEYGLDPPPS 508
            G++PER G+P C ++L+TG CK+ ++CK+HHPKN         L+  G P+R G N CSYY + G CKFG  CK+ HP      A   + PPP+
Sbjct:   85 GQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREGDNECSYYLKTGQCKFGITCKFHHP----QPAGTTVPPPPA 174          

HSP 3 Score: 82.4185 bits (202), Expect = 2.081e-15
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 2
Query:  233 FPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKG-LPLRPGQNVCSYYSRYGICKFGPACKYDHPIHPDASAEY 487
            +PERPG P+C+Y++RTG C Y + C+Y+HP++R   S   T+   G  P R G+  C +Y + G CKFG +CK+ HP +   S  +
Sbjct:   42 YPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDR--ASVEATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSH 125          
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H6_ORYSJ (Zinc finger CCCH domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=Os01g0258700 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 8.428e-25
Identity = 60/175 (34.29%), Postives = 91/175 (52.00%), Query Frame = 2
Query:    2 IGSWSSPRALNEPAPFVPMMYSP----TPGVPSQNSEWNGYQSPLYP-----QERSVQSAPTYVINNN----------PLVDNVQIIHQPQMLVGE--FPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPI 463
            + +W   R    P  ++P  Y+P    +  +P Q   W+ Y + + P      +++VQ+ P Y + ++          P V       Q      E  FPERPGQP+C Y++RTGDCK+ + CKYHHP+          ++   LPLRPG   C+YY++ G C++G ACKYDHP+
Sbjct:  208 LANWQMGRPPVVPGSYIPGSYTPMMLSSGMIPLQG--WSPYPASVNPVVSGGAQQNVQAGPVYGMGHHGSSSTIAYGGPYVPYASSTGQSSNNQQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHPM 380          

HSP 2 Score: 98.2117 bits (243), Expect = 3.664e-20
Identity = 42/91 (46.15%), Postives = 57/91 (62.64%), Query Frame = 2
Query:  230 EFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPIHPDASAEYGLDPP 502
            ++PER GQP C Y+++TG CK+ +NCKYHHPK +     P  L++ G P+R G+  CSYY + G CKFG  CK+ HP         G+ PP
Sbjct:  104 DYPERAGQPICEYYMKTGTCKFGTNCKYHHPK-QDGAVLPVMLNNSGFPIRLGEKECSYYMKTGQCKFGTTCKFHHPEFGGVPMTPGIYPP 193          

HSP 3 Score: 80.1073 bits (196), Expect = 1.033e-14
Identity = 35/81 (43.21%), Postives = 46/81 (56.79%), Query Frame = 2
Query:  227 GEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPK---SPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            G  PERPG+ +C Y+LRTG C +   C+Y+HP++R            +    P R GQ +C YY + G CKFG  CKY HP
Sbjct:   54 GRLPERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQPICEYYMKTGTCKFGTNCKYHHP 134          
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H58_ARATH (Zinc finger CCCH domain-containing protein 58 OS=Arabidopsis thaliana GN=At5g18550 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.463e-24
Identity = 61/149 (40.94%), Postives = 86/149 (57.72%), Query Frame = 2
Query:   68 PTPGV-PSQNSEWNGYQSPLYPQERSVQSAPTYVINNNPLVDNVQIIHQPQMLVGEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPC-TLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPIHPDASAEYGLDPPPS 508
            P+PG  PS  +      +PL P   + QS P+          +  + ++ Q     FP+RP QPEC YF+RTGDCK+ ++C++HHP      SP   TLS  GLPLRPG   C++++++GICKFGPACK+DH +    S+     P PS
Sbjct:  255 PSPGTQPSMGTSSVYGITPLSPSAPAYQSGPS----------STGVSNKEQT----FPQRPEQPECQYFMRTGDCKFGTSCRFHHPME--AASPEASTLSHIGLPLRPGAVPCTHFAQHGICKFGPACKFDHSL---GSSSLSYSPSPS 384          

HSP 2 Score: 105.145 bits (261), Expect = 2.998e-22
Identity = 45/87 (51.72%), Postives = 57/87 (65.52%), Query Frame = 2
Query:  227 GEFPERPGQPECSYFLRTGDCKYKSNCKYHHPK--NRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPIHPDASA 481
            GEFPER GQP C +F+RTG CK+ ++CKYHHP+         P +L+  G PLRPG+  CSY+ R G CKFG  C+Y HP+ P   A
Sbjct:   92 GEFPERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTPVSLNYMGFPLRPGEKECSYFMRTGQCKFGSTCRYHHPVPPGVQA 178          

HSP 3 Score: 90.8929 bits (224), Expect = 5.850e-18
Identity = 38/76 (50.00%), Postives = 48/76 (63.16%), Query Frame = 2
Query:  233 FPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            FPERP +P+C Y+LRTG C Y S C+++HP+NR P            P R GQ VC ++ R G CKFG +CKY HP
Sbjct:   48 FPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRAPVLGGLRTEAGEFPERMGQPVCQHFMRTGTCKFGASCKYHHP 123          
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H3_ARATH (Zinc finger CCCH domain-containing protein 3 OS=Arabidopsis thaliana GN=At1g04990 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.998e-22
Identity = 58/167 (34.73%), Postives = 72/167 (43.11%), Query Frame = 2
Query:   38 PAPFVPMMYSPTPGVPSQNSEWNGYQSPLYPQERSVQSAPTYVINNNPLVDNVQIIHQPQMLVGE-FPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPIHPDASAEYGLDPPPSFGDSTTRQE 535
            P P VP  Y P    PSQ     G+  P         S   Y + N P            + +     E   QPEC +F+ TG CKY  +CKY HP  RI + PP  ++   LP RPGQ  C  +  YG CKFGP CK+DHP+ P          P  F    T  +
Sbjct:  197 PRPQVPQSYVPILVSPSQ-----GFLPPQGWAPYMAASNSMYNVKNQPYYSGSSASMAMAVALNRGLSESSDQPECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPMLPYPGLTMATSLPTPFASPVTTHQ 358          

HSP 2 Score: 101.293 bits (251), Expect = 4.329e-21
Identity = 49/95 (51.58%), Postives = 60/95 (63.16%), Query Frame = 2
Query:  230 EFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPIHPD--ASAEYGLDPPPS 508
            E PER GQP+C YFL+TG CKY   CKYHHPK+R   + P   +  GLP+R G+  C YY R G C+FG ACK+ HP  PD   S  YG+   P+
Sbjct:   86 ELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDR-NGAQPVMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHP-QPDNGHSTAYGMSSFPA 178          

HSP 3 Score: 80.1073 bits (196), Expect = 1.033e-14
Identity = 34/76 (44.74%), Postives = 49/76 (64.47%), Query Frame = 2
Query:  233 FPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            +P+RPG+ +C ++LRTG C Y S+C+Y+HP   +P+        + LP R GQ  C Y+ + G CK+GP CKY HP
Sbjct:   44 YPDRPGERDCQFYLRTGLCGYGSSCRYNHP-THLPQD--VAYYKEELPERIGQPDCEYFLKTGACKYGPTCKYHHP 116          
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H37_ARATH (Zinc finger CCCH domain-containing protein 37 OS=Arabidopsis thaliana GN=HUA1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.653e-21
Identity = 63/190 (33.16%), Postives = 88/190 (46.32%), Query Frame = 2
Query:    2 IGSWSSPRALNEP-APFVPMMYSPTPGVPSQNSEWN----------------GYQSP----LYPQERSVQ----SAPTYVINNN---PLVDNVQIIHQPQMLV--GEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRI-------PKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            +G  S P A N P   F P +Y  + G+P ++ E +                 Y  P      PQ   V     S+ T  +N     P     Q + QP + V    +P+RPGQ EC Y+++TG+CK+   CK+HHP +R+       P+ P   LS  G P R G   C YY + G CK+G  CK+DHP
Sbjct:  310 VGLTSEPDATNNPHVTFTPALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSSNTANLNLGLVTPATSFYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHP 499          

HSP 2 Score: 85.8853 bits (211), Expect = 1.882e-16
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = 2
Query:  230 EFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            E+PERPG+P+C Y+++T  CKY S CK++HP+     S     +   LP RP + +C++Y + G CKFG +CK+ HP
Sbjct:  221 EYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVS---VETQDSLPERPSEPMCTFYMKTGKCKFGLSCKFHHP 294          

HSP 3 Score: 78.9518 bits (193), Expect = 2.301e-14
Identity = 35/101 (34.65%), Postives = 55/101 (54.46%), Query Frame = 2
Query:  236 PERPGQPECSYFLRTGDCKYKSNCKYHHPKN-RIPKS-------------------------PPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            PERP +P C+++++TG CK+  +CK+HHPK+ ++P S                         P    + KGLP+R G+  C +Y + G CK+G  C+Y+HP
Sbjct:  266 PERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHP 366          
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H26_ARATH (Zinc finger CCCH domain-containing protein 26 OS=Arabidopsis thaliana GN=ZFN2 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.102e-19
Identity = 61/185 (32.97%), Postives = 83/185 (44.86%), Query Frame = 2
Query:   47 FVPMMYSPTPGV-PSQNSEWNGYQS---PLYPQERSVQSAPTYVINNNPLVDNVQIIHQPQMLVGEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDH---------------------PIHPDASAEYGLDPPPSFGDSTT 526
            ++P M +P+ G+ P Q   W  Y +   P+Y  +  + S+     ++  +   V   H        F ER    EC +F+ TG CKY  +CKY HPK R+ +SPP  L+   LP RPGQ  C  +  YG CKFG  CK+DH                     P  P  S    +  PPS  D TT
Sbjct:  208 YMPYMVAPSQGLLPPQG--WATYMTASNPIYNMKTQLDSS-----SSASVAVTVTSHHH------SFSERA---ECRFFMNTGTCKYGDDCKYSHPKERLLQSPPTLLNPIVLPARPGQPACGNFKAYGFCKFGANCKFDHSMLLNPYNNTGLAMSSLPTPYPYAPPVSTNLRISSPPSPSDMTT 376          

HSP 2 Score: 88.5817 bits (218), Expect = 2.903e-17
Identity = 47/116 (40.52%), Postives = 65/116 (56.03%), Query Frame = 2
Query:  191 NVQIIHQPQMLV---GEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPIHP-----DASAEYGLDPPPSFG 514
            N  + + PQ ++    + PER GQP+C     TG CKY   CKYHHPK+R   + P   +  GLP+R G+  C YY + G+C+FG ACK+ HP HP     +  + Y +   PS G
Sbjct:   68 NHPLTNLPQGIIYYRDQLPERVGQPDCE----TGACKYGPTCKYHHPKDR-NGAGPVLFNVLGLPMRQGEKPCPYYMQTGLCRFGVACKFHHP-HPHSQPSNGHSAYAMSSFPSVG 177          
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H43_ORYSJ (Zinc finger CCCH domain-containing protein 43 OS=Oryza sativa subsp. japonica GN=Os06g0520600 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.430e-18
Identity = 42/99 (42.42%), Postives = 56/99 (56.57%), Query Frame = 2
Query:  230 EFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPP----------------------CTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            +FP RPG+P+CSY+++ G CK+  NC+++HP  R+P  P                         L+  GLPLRPG  +CSYY   GICKFG  CK+DHP
Sbjct:   86 QFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPP-RMPVPPQQEYFSGNACHCHHIEGKSKVEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHP 183          

HSP 2 Score: 82.4185 bits (202), Expect = 5.753e-16
Identity = 32/77 (41.56%), Postives = 48/77 (62.34%), Query Frame = 2
Query:  230 EFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            + P RPG+P+CSY+++ G CK+  +C Y+HP  R           +  P RPG+  CSYY ++G CKFG  C+++HP
Sbjct:   40 QHPRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHP 116          

HSP 3 Score: 21.9422 bits (45), Expect = 5.753e-16
Identity = 6/18 (33.33%), Postives = 14/18 (77.78%), Query Frame = 3
Query:  576 RTFSSLCNFFLHRGLSRF 629
            R  + LC+++++RG+ +F
Sbjct:  157 RPGTGLCSYYMNRGICKF 174          
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H42_ORYSJ (Zinc finger CCCH domain-containing protein 42 OS=Oryza sativa subsp. japonica GN=Os06g0519400 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.903e-17
Identity = 42/97 (43.30%), Postives = 56/97 (57.73%), Query Frame = 2
Query:  230 EFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIP--------KSPPCTLSDK------------GLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            E P+RPG+ +C ++LR G CKY  NC+++HP +R+P        K+  C  S+             GLPLRPG  +CSYY   GICKFG  CK+ HP
Sbjct:  116 EHPQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVKLNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHP 212          
The following BLAST results are available for this feature:
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
ZFNL_PEA1.064e-2761.04Zinc finger CCCH domain-containing protein ZFN-lik... [more]
C3H5_ORYSJ3.095e-2738.86Zinc finger CCCH domain-containing protein 5 OS=Or... [more]
C3H32_ARATH5.279e-2737.87Zinc finger CCCH domain-containing protein 32 OS=A... [more]
C3H6_ORYSJ8.428e-2534.29Zinc finger CCCH domain-containing protein 6 OS=Or... [more]
C3H58_ARATH5.463e-2440.94Zinc finger CCCH domain-containing protein 58 OS=A... [more]
C3H3_ARATH2.998e-2234.73Zinc finger CCCH domain-containing protein 3 OS=Ar... [more]
C3H37_ARATH5.653e-2133.16Zinc finger CCCH domain-containing protein 37 OS=A... [more]
C3H26_ARATH3.102e-1932.97Zinc finger CCCH domain-containing protein 26 OS=A... [more]
C3H43_ORYSJ3.430e-1842.42Zinc finger CCCH domain-containing protein 43 OS=O... [more]
C3H42_ORYSJ2.903e-1743.30Zinc finger CCCH domain-containing protein 42 OS=O... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00587 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00587 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623496 ID=BQ623496; Name=BQ623496; organism=Citrus sinensis; type=EST; length=631bp
TATAGGATCCTGGTCATCACCTAGGGCTTTAAATGAACCTGCTCCCTTTG
TGCCAATGATGTATTCACCAACTCCAGGGGTTCCTTCTCAAAATTCAGAA
TGGAATGGGTATCAGTCTCCTCTATATCCACAAGAAAGGAGCGTGCAGTC
AGCCCCCACGTATGTCATAAACAACAACCCATTGGTAGATAATGTCCAGA
TAATTCATCAGCCGCAGATGCTAGTTGGTGAGTTCCCAGAACGACCTGGC
CAGCCTGAGTGCAGTTACTTCCTAAGAACGGGAGACTGTAAGTATAAGTC
TAATTGCAAATATCATCATCCAAAAAATCGAATCCCTAAGTCACCACCAT
GCACTCTCAGCGACAAGGGTCTGCCACTGCGGCCTGGTCAAAACGTCTGT
TCATATTATAGCCGCTATGGCATTTGCAAGTTTGGGCCGGCTTGTAAATA
TGATCATCCGATACATCCAGATGCTTCAGCTGAGTATGGGCTAGATCCGC
CTCCATCATTTGGCGACTCTACAACTAGGCAAGAGACTGGAATGGCTGGA
ACTGGAAACGGAAATGGGGGTGACAAGAACATTTAGCAGCCTGTGTAATT
TTTTTTTGCATCGAGGGCTCTCTAGATTTTA
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