BQ623501

Overview
NameBQ623501
Unique NameBQ623501
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12683 contig Csv1_Contig12683:458..1149. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623501 vs. ExPASy Swiss-Prot
Match: MPAA2_AMBAR (Pollen allergen Amb a 2 OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.035e-29
Identity = 79/213 (37.09%), Postives = 115/213 (53.99%), Query Frame = 1
Query:   16 GSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFE------GGK-----GP-------DVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGT-RQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEA 597
            G+LR G     PLWI+F+    I+L+  + V+S KTIDGRG +V+L   G+ L   ++VII N++        GG+     GP       D DAI +   S  IWID C+L    DGL+D+   ST +T+S C F+ H+K +L+GA  +H  D  + VT+ +  F  T  +R PR R+    + NN+   W  YA+  S +  I SQ N + A
Sbjct:  104 GTLRFGATQDRPLWIIFQRDMIIYLQQEMVVTSDKTIDGRGAKVELVYGGITLMNVKNVIIHNIDIHDVRVLPGGRIKSNGGPAIPRHQSDGDAIHVTGSSD-IWIDHCTLSKSFDGLVDVNWGSTGVTISNCKFTHHEKAVLLGASDTHFQDLKMHVTLAYNIFTNTVHERMPRCRFGFFQIVNNFYDRWDKYAIGGSSNPTILSQGNKFVA 315          
BLAST of BQ623501 vs. ExPASy Swiss-Prot
Match: PEL15_ARATH (Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.765e-29
Identity = 84/243 (34.57%), Postives = 121/243 (49.79%), Query Frame = 1
Query:   13 PGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLT-GKGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPK-----------------SKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRAEG 684
            PG+LR     +EPLWIVF+    I L+  L ++S+KTID RG  V +  G  + ++   +VII  L     K      ++  P                  S HIWID  SL    DGL+D    ST ITVS  HF+ H++ ML+G   S+  D+ ++VTI ++ F +G  QR PR R+   H+ NN   +W +YA+  S +  I SQ N Y A   + A +      +D  E +    R+EG
Sbjct:  176 PGTLRHAVIQEEPLWIVFKRDMVIELKQELIMNSFKTIDARGSNVHIANGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHFGWRTMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITVSNNHFTHHNEVMLLGHSDSYTKDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEG 418          
BLAST of BQ623501 vs. ExPASy Swiss-Prot
Match: MPA13_AMBAR (Pollen allergen Amb a 1.3 OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.765e-29
Identity = 82/238 (34.45%), Postives = 117/238 (49.16%), Query Frame = 1
Query:    1 ADDGPGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGK-----------GP-------DVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEA 657
            A+   G+LR       PLWI+F+    I+L   L V+S KTIDGRG +V++   GL L   +++II N+     K           GP       D D I +   S+ IWID CSL    DGL+D+T  ST +T+S C F+   K +L+GAD +HV D+ +  T+  + F D   QR PR R+    + NN    WG YA+  S    I  Q N + A   ++    L    +   E+
Sbjct:   99 ANPKEGTLRFAAAQNRPLWIIFKNDMVINLNQELVVNSDKTIDGRGVKVEIINGGLTLMNVKNIIIHNINIHDVKVLPGGMIKSNDGPPILRQASDGDTINVAGSSQ-IWIDHCSLSKSFDGLVDVTLGSTHVTISNCKFTQQSKAILLGADDTHVQDKGMLATVAFNMFTDNVDQRMPRCRFGFFQVVNNNYDRWGTYAIGGSSAPTILCQGNRFLAPDDQIKKNVLARTGTGAAES 335          
BLAST of BQ623501 vs. ExPASy Swiss-Prot
Match: PEL18_SOLLC (Probable pectate lyase P18 OS=Solanum lycopersicum GN=9612 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.010e-29
Identity = 85/244 (34.84%), Postives = 125/244 (51.23%), Query Frame = 1
Query:   13 PGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKG-LRLKECEHVIICNLEF----EGGKG--------------PDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRAEG 684
            PG+LR      EPLWI+F+    I L+  L ++SYKTIDGRG  V ++G   + +    ++II  +      + G G               D D I I    K+IW+D CSL +  DGLID    ST IT+S  +F+ HDK ML+G   S   D+ ++VT+  + F +G  QR PR R+   H+ NN   +W +YA+  S    I SQ N + A  +K   +    + + + + RS   R+EG
Sbjct:  108 PGTLRHAVIQDEPLWIIFKRDMVIQLKQELVMNSYKTIDGRGASVHISGGPCITIHHTSNIIIHGINIHDCKQSGNGNIRDSPNHSGWWDVSDGDGISIFG-GKNIWVDHCSLSNCHDGLIDAIHGSTAITISNNYFTHHDKVMLLGHSDSFTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLAPNEKYRKEVTKHEDAPESQWRSWNWRSEG 350          
BLAST of BQ623501 vs. ExPASy Swiss-Prot
Match: MPAC1_CUPAR (Major pollen allergen Cup a 1 OS=Cupressus arizonica PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.931e-29
Identity = 84/217 (38.71%), Postives = 115/217 (53.00%), Query Frame = 1
Query:   13 PGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKG--LRLKECEHVIICNLEFEG---------------GKGP----DVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEA 597
            PG+LR G   ++ LWI+F  +  I L+  L V+ YKTIDGRG  V L   G  L +++  HVI+  L   G               G  P    D DAI ++  + + WID  SL D  DGLID+T  ST IT+S  HF +H K ML+G D ++  D+ ++VT+  + F     QR PR RY  VH+ NN    W IYA+  S +  I S+ N + A
Sbjct:   55 PGTLRYGATREKALWIIFSQNMNIKLQMPLYVAGYKTIDGRGAVVHLGNGGPCLFMRKASHVILHGLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVT-NAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVHVANNNYDQWNIYAIGGSSNPTILSEGNSFTA 270          
BLAST of BQ623501 vs. ExPASy Swiss-Prot
Match: PEL9_ARATH (Probable pectate lyase 9 OS=Arabidopsis thaliana GN=At3g24230 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.134e-29
Identity = 83/232 (35.78%), Postives = 124/232 (53.45%), Query Frame = 1
Query:   13 PGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLT-GKGLRLKECEHVIICNLEFE-----------------GGKGP-DVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDK 648
            PG+LR      EPLWI+F+    I L+  L ++S+KTID RG  V +  G  + ++   +VI+  L                    G +G  D DAI I   S HIWID  SL +  DGL+D+   ST IT+S  HF+ HD+ ML+G + S+  D+ ++VT+ ++ F +G  QR PR R+   H+ NN   +W +YA+  S +  I SQ N + A  K  + K +T++   K
Sbjct:  158 PGTLRHAVIQVEPLWIIFKRDMVIKLKQELIMNSFKTIDARGANVHIANGACITIQNITNVIVHGLHIHDCKRTGNVTVRSSPSQAGFRGTADGDAINIFGSS-HIWIDHNSLSNCTDGLVDVVNGSTAITISNNHFTHHDEVMLLGHNDSYTRDKMMQVTVAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWKMYAIGGSANPTINSQGNRF-AAPKNHSAKEVTKRLDTK 387          
BLAST of BQ623501 vs. ExPASy Swiss-Prot
Match: PEL19_ARATH (Putative pectate lyase 19 OS=Arabidopsis thaliana GN=At5g15110 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.144e-28
Identity = 84/234 (35.90%), Postives = 128/234 (54.70%), Query Frame = 1
Query:   13 PGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLT-GKGLRLKECEHVIICNL------EFEGGKGPD-VDAIQIKPK----------SKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEK--ASDKE 651
            PG+LR     KEPLWI+F+   +I L   L ++S+KTID RG  V +  G G+ ++  ++VII  L      E  GG   D VD   ++ +          S +IW+D  S+    DGLID    ST IT+S  HF+ H+  ML+GA  ++ AD+ ++VT+ ++ F  G  QR PR+R+  VH+ NN   +W +YA+  S    I S  N + A   K  ++ +T++  AS+ E
Sbjct:  176 PGTLRHAVIQKEPLWIIFKNDMSIRLNQELLINSHKTIDARGANVHVAHGAGITMQFVKNVIIHGLHIHHISESSGGMIRDSVDHFGMRTRADGDGLSIYGSSNIWLDHISMSKCQDGLIDAIVGSTGITISNSHFTHHNDVMLLGAQNTNEADKHMQVTVAYNHFGKGLVQRMPRIRWGFVHVVNNDYTHWELYAIGGSQGPTILSHGNRFIAPPHKPHYREVTKRDYASEDE 409          
BLAST of BQ623501 vs. ExPASy Swiss-Prot
Match: MPAJ1_JUNAS (Major pollen allergen Jun a 1 OS=Juniperus ashei PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.494e-28
Identity = 83/217 (38.25%), Postives = 116/217 (53.46%), Query Frame = 1
Query:   13 PGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKG--LRLKECEHVIICNLEFEG---------------GKGP----DVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEA 597
            PG+LR G   ++ LWI+F  +  I L+  L V+ +KTIDGRG  V L   G  L +++  HVI+ +L   G               G  P    D DAI ++  + + WID  SL D  DGLID+T  ST IT+S  HF +H K ML+G D ++  D+ ++VT+  + F     QR PR RY  VH+ NN    W IYA+  S +  I S+ N + A
Sbjct:   76 PGTLRYGATREKALWIIFSQNMNIKLKMPLYVAGHKTIDGRGADVHLGNGGPCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVT-NAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVHVANNNYDPWNIYAIGGSSNPTILSEGNSFTA 291          
BLAST of BQ623501 vs. ExPASy Swiss-Prot
Match: PEL22_ARATH (Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.951e-28
Identity = 82/244 (33.61%), Postives = 130/244 (53.28%), Query Frame = 1
Query:   13 PGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKG-LRLKECEHVIICNLEF----EGGKG--------------PDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRAEG 684
            PG+LR      EPLWI+F+   TI L+  L ++S+KT+DGRG  V ++G   + ++   ++II  L      +GG                 D D + I   S H+W+D CSL + +DGLID  R ST IT+S  + + H+K ML+G   ++  D+ ++VTI  + F +G  QR PR R+   H+ NN   +W +YA+  S +  I SQ N + A     + +    + + ++E R+   R+EG
Sbjct:  136 PGTLRYAVIQDEPLWIIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDCKQGGNTYVRDSPEHYGYRTVSDGDGVSIFGGS-HVWVDHCSLSNCNDGLIDAIRGSTAITISNNYLTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPDDSSSKEVTKHEDAPEDEWRNWNWRSEG 378          
BLAST of BQ623501 vs. ExPASy Swiss-Prot
Match: MPAJ1_JUNVI (Major pollen allergen Jun v 1 OS=Juniperus virginiana PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.548e-28
Identity = 83/217 (38.25%), Postives = 115/217 (53.00%), Query Frame = 1
Query:   13 PGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKG--LRLKECEHVIICNLEFEG---------------GKGP----DVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEA 597
            PG+LR G   ++ LWI+F  +  I L+  L V+ +KTIDGRG  V L   G  L +++  HVI+  L   G               G  P    D DAI ++  + + WID  SL D  DGLID+T  ST IT+S  HF +H K ML+G D ++  D+ ++VT+  + F     QR PR RY  VH+ NN    W IYA+  S +  I S+ N + A
Sbjct:   76 PGTLRYGATREKTLWIIFSQNMNIKLKMPLYVAGHKTIDGRGADVHLGNGGPCLFMRKVSHVILHGLHIHGCNTSVLGDVLVSESIGVVPVHAQDGDAITMRNVT-NAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVHVANNNYDPWNIYAIGGSSNPTILSEGNSFTA 291          
The following BLAST results are available for this feature:
BLAST of BQ623501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
MPAA2_AMBAR1.035e-2937.09Pollen allergen Amb a 2 OS=Ambrosia artemisiifolia... [more]
PEL15_ARATH1.765e-2934.57Probable pectate lyase 15 OS=Arabidopsis thaliana ... [more]
MPA13_AMBAR1.765e-2934.45Pollen allergen Amb a 1.3 OS=Ambrosia artemisiifol... [more]
PEL18_SOLLC3.010e-2934.84Probable pectate lyase P18 OS=Solanum lycopersicum... [more]
MPAC1_CUPAR3.931e-2938.71Major pollen allergen Cup a 1 OS=Cupressus arizoni... [more]
PEL9_ARATH5.134e-2935.78Probable pectate lyase 9 OS=Arabidopsis thaliana G... [more]
PEL19_ARATH1.144e-2835.90Putative pectate lyase 19 OS=Arabidopsis thaliana ... [more]
MPAJ1_JUNAS1.494e-2838.25Major pollen allergen Jun a 1 OS=Juniperus ashei P... [more]
PEL22_ARATH1.951e-2833.61Probable pectate lyase 22 OS=Arabidopsis thaliana ... [more]
MPAJ1_JUNVI2.548e-2838.25Major pollen allergen Jun v 1 OS=Juniperus virgini... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00592 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00592 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623501 ID=BQ623501; Name=BQ623501; organism=Citrus sinensis; type=EST; length=692bp
GCTGATGACGGGCCAGGATCACTTCGAGAAGGATGCCGCATGAAAGAACC
TCTTTGGATTGTCTTTGAAGTGTCAGGCACCATTCATCTCCGCTCTCACT
TGAGTGTCTCATCTTACAAAACCATAGATGGCCGAGGACAAAGGGTGAAA
CTTACAGGAAAGGGTTTGAGGCTGAAGGAATGCGAACATGTTATAATATG
CAATCTAGAGTTTGAAGGTGGTAAAGGACCTGATGTTGATGCCATTCAAA
TAAAACCTAAGTCAAAACACATATGGATAGACCGTTGTAGTCTCCGTGAT
TATGATGATGGGCTGATAGATATCACCAGAGAAAGCACAGATATTACAGT
TTCTAGGTGTCACTTTTCATCACATGACAAGACCATGCTCATTGGAGCAG
ATCCCTCTCATGTTGCTGATAGATGTATTCGAGTGACCATTCATCATTGT
TTTTTTGATGGGACTCGACAACGACATCCACGTGTTAGATATGCTAAAGT
ACATCTGTATAACAATTACACCAGAAATTGGGGAATTTATGCTGTTTGTG
CCAGTGTTGATTCACAGATATACTCCCAATGTAATATATATGAAGCAGGA
CAGAAGAAGATGGCATTCAAGTATCTTACAGAGAAGGCATCAGACAAGGA
GGAGGCAAGATCTGGTTGCATAAGGGCTGAAGGGGGATTTGT
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