BQ623501

Overview
NameBQ623501
Unique NameBQ623501
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12683 contig Csv1_Contig12683:458..1149. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623501 vs. ExPASy Swiss-Prot
Match: MPA11_AMBAR (Pollen allergen Amb a 1.1 OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.276e-27
Identity = 79/222 (35.59%), Postives = 107/222 (48.20%), Query Frame = 1
Query:    1 ADDGPGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGK------------------GPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKK 609
            A+   G+LR G     PLWI+FE    I L   + V+S KTIDGRG +V++   G  L   ++VII N+     K                  G D DAI I   S+ IWID CSL    DGL+D    +T +TVS   F+ H   +L GA   ++ DR +  T+  + F D   QR PR R+    + NN    WG YA+  S    I SQ N + A  ++
Sbjct:   98 ANPKEGTLRFGAAQNRPLWIIFERDMVIRLDKEMVVNSDKTIDGRGAKVEIINAGFTLNGVKNVIIHNINMHDVKVNPGGLIKSNDGPAAPRAGSDGDAISISGSSQ-IWIDHCSLSKSVDGLVDAKLGTTRLTVSNSLFTQHQFVLLFGAGDENIEDRGMLATVAFNTFTDNVDQRMPRCRHGFFQVVNNNYDKWGSYAIGGSASPTILSQGNRFCAPDER 318          
BLAST of BQ623501 vs. ExPASy Swiss-Prot
Match: PEL5_ARATH (Probable pectate lyase 5 OS=Arabidopsis thaliana GN=At1g67750 PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 8.197e-27
Identity = 80/227 (35.24%), Postives = 116/227 (51.10%), Query Frame = 1
Query:   13 PGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTG--------------KGLRLKECE-----HVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTE 633
            PG+LR      EPLWI+F     I L+  L ++S+KTIDGRG  V + G               G+ + +C+     +V      +      D DA+ I   S H+W+D CSL +  DGLID    ST IT+S  + S H+K ML+G   S+  D+ ++VTI  + F +G  QR PR R+   H+ NN   +W +YA+  S    I SQ N + A    + FK +T+
Sbjct:  114 PGTLRHAVIQDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHDCKRKGNAYVRDSPSHYGWRTASDGDAVSIFGGS-HVWVDHCSLSNCADGLIDAIHGSTAITISNNYLSHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWQMYAIGGSAAPTINSQGNRFLAPNDHV-FKEVTK 338          
BLAST of BQ623501 vs. ExPASy Swiss-Prot
Match: MPAC1_CHAOB (Major pollen allergen Cha o 1 OS=Chamaecyparis obtusa PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.826e-26
Identity = 83/243 (34.16%), Postives = 116/243 (47.74%), Query Frame = 1
Query:   13 PGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKG--LRLKECEHVII-------CNLEFEGG------------KGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEA--RSGC 669
            PG+LR G   +  LWI+F  +  I L   L ++  KTIDGRG  V +   G  L ++   HVI+       CN    G                D DAI ++  +  +WID  SL D  DGL+D+T  ST +T+S  HF +H K ML+G    +  D+ ++VT+  + F     QR PR RY  +H+ NN    W IYA+  S +  I S+ N + A              SDK+E   R GC
Sbjct:   76 PGTLRYGATRERSLWIIFSKNLNIKLNMPLYIAGNKTIDGRGAEVHIGNGGPCLFMRTVSHVILHGLNIHGCNTSVSGNVLISEASGVVPVHAQDGDAITMRNVTD-VWIDHNSLSDSSDGLVDVTLASTGVTISNNHFFNHHKVMLLGHSDIYSDDKSMKVTVAFNQFGPNAGQRMPRARYGLIHVANNNYDPWSIYAIGGSSNPTILSEGNSFTA-----------PNDSDKKEVTRRVGC 306          
BLAST of BQ623501 vs. ExPASy Swiss-Prot
Match: PEL8_ARATH (Probable pectate lyase 8 OS=Arabidopsis thaliana GN=At3g07010 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.115e-26
Identity = 82/244 (33.61%), Postives = 122/244 (50.00%), Query Frame = 1
Query:   13 PGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLT-GKGLRLKECEHVIICNLEFEGGKGP------------------DVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRAEG 684
            PG+LR      EPLWI+F+    I L+  L ++S+KTIDGRG  V +  G  L ++   ++I+  +     K                    D DAI I   S HIWID  SL +  DGL+D    ST ITVS   F+ H++ ML+G   S+  D+ ++VTI ++ F +G  QR PR R+   H+ NN   +W +YA+  S    I SQ N + A     A +    + + + + +    R+EG
Sbjct:  122 PGTLRHAVIQDEPLWIIFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACLTIQYVTNIIVHGIHVHDCKPTGNAMVRSSPSHYGFRSMADGDAISIFGSS-HIWIDHNSLSNCADGLVDAVMSSTAITVSNNFFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAGPTINSQGNRFLAPVNPFAKEVTKREYTGESKWKHWNWRSEG 364          
BLAST of BQ623501 vs. ExPASy Swiss-Prot
Match: SBP_CRYJA (Sugi basic protein OS=Cryptomeria japonica PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 6.939e-26
Identity = 76/217 (35.02%), Postives = 112/217 (51.61%), Query Frame = 1
Query:   13 PGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKG--LRLKECEHVIICNLEFEG---------------GKGP----DVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEA 597
            PG+LR G     PLWI+F  +  I L+  + ++ YKT DGRG +V +   G  + +K   +VII  L   G               G  P    D DA+ ++  + +IWID  S  +  DGL+D+T  ST +T+S   F +H K ML+G D ++  D+ ++VT+  + F     QR PR RY  VH+ NN    W IYA+  S +  I S+ N + A
Sbjct:   76 PGTLRYGATRDRPLWIIFSGNMNIKLKMPMYIAGYKTFDGRGAQVYIGNGGPCVFIKRVSNVIIHGLHLYGCSTSVLGNVLINESFGVEPVHPQDGDALTLRTAT-NIWIDHNSFSNSSDGLVDVTLSSTGVTISNNLFFNHHKVMLLGHDDAYSDDKSMKVTVAFNQFGPNCGQRMPRARYGLVHVANNNYDPWTIYAIGGSSNPTILSEGNSFTA 291          
BLAST of BQ623501 vs. ExPASy Swiss-Prot
Match: PEL14_ARATH (Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.019e-25
Identity = 82/244 (33.61%), Postives = 123/244 (50.41%), Query Frame = 1
Query:   13 PGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTG--------------KGLRLKECE---HVIICNLEFEGG--KGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRAEG 684
            PG+LR      EPLWIVF+    I L   L ++S+KTIDGRG  V + G               G+ + +C+   + ++ + E   G     D D I I   S HIWID  SL    DGLID    ST IT+S  + + H++ +L+G   S+  D+ ++VTI ++ F +G  QR PR R+   H+ NN   +W +YA+  S +  I SQ N + A   + A +      + K E  +   R++G
Sbjct:  124 PGTLRYAVIQDEPLWIVFKRDMVITLSQELIMNSFKTIDGRGVNVHIAGGACLTVQYVTNIIIHGINIHDCKRTGNAMVRSSESHYGWRTMADGDGISIFGSS-HIWIDHNSLSSCADGLIDAIMGSTAITISNNYLTHHNEAILLGHTDSYTRDKMMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPGNRFAKEVTKRVGAGKGEWNNWNWRSQG 366          
BLAST of BQ623501 vs. ExPASy Swiss-Prot
Match: PEL10_ARATH (Probable pectate lyase 10 OS=Arabidopsis thaliana GN=At3g24670 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.309e-24
Identity = 82/244 (33.61%), Postives = 121/244 (49.59%), Query Frame = 1
Query:   13 PGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTG--------------KGLRLKECEH----VIICNLEFEGGKG-PDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRAEG 684
            PG+LR       PLWIVF+    I L   L ++S+KTIDGRG  V + G               G+ + +C      ++  +    G +   D DAI I   S HIWID  SL +  DGLID    ST IT+S  + + H++ ML+G   S+  D+ ++VTI ++ F +G  QR PR R+   H+ NN   +W +YA+  S +  I SQ N + A     A +      S + E +    R++G
Sbjct:  146 PGTLRHAVIQDRPLWIVFKRDMVITLTQELIMNSFKTIDGRGVNVAIAGGACITIQYVTNIIIHGINVHDCRRTGNAMVRSSPSHYGWRTMADGDAISIFGSS-HIWIDHNSLSNCADGLIDAIMGSTAITISNNYMTHHNEVMLMGHSDSYTRDKLMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSANPTINSQGNRFLAPGNPFAKEVTKRVGSWQGEWKQWNWRSQG 388          
BLAST of BQ623501 vs. ExPASy Swiss-Prot
Match: MPA14_AMBAR (Pollen allergen Amb a 1.4 OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.223e-23
Identity = 78/222 (35.14%), Postives = 105/222 (47.30%), Query Frame = 1
Query:    1 ADDGPGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFE------GG------------KGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKK 609
            A+   G+LR G     PLWI+F     I L   L++++ KTIDGRG +V++   G  +   +++II N+         GG            KG D DAI I   S+ IWID CSL    DGLID    ST  TVS C F+ H   +L         +R +  T+  + F D   QR P +R+  V + NN    WG YA+  S    I SQ N + A   K
Sbjct:   99 ANPKEGTLRFGAAQNRPLWIIFARDMVIRLDRELAINNDKTIDGRGAKVEIINAGFAIYNVKNIIIHNIIMHDIVVNPGGLIKSHDGPPVPRKGSDGDAIGISGGSQ-IWIDHCSLSKAVDGLIDAKHGSTHFTVSNCLFTQHQYLLLFW----DFDERGMLCTVAFNKFTDNVDQRMPNLRHGFVQVVNNNYERWGSYALGGSAGPTILSQGNRFLASDIK 315          
BLAST of BQ623501 vs. ExPASy Swiss-Prot
Match: PELB_COLGL (Pectate lyase B OS=Colletotrichum gloeosporioides GN=PLB PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.084e-18
Identity = 61/196 (31.12%), Postives = 97/196 (49.49%), Query Frame = 1
Query:   61 VFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSL--------RDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRC--IRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAF 618
            V  V G I   + + V S K+I GR     LTG GL + + E+VI+ N++       + D I I+  SK +W+D C L        +DY DGL+DIT  S  +TVS  +   H K  L+G   S+ A+    + VT  +  +     R+P VR+  VH++NNY        V   + +Q+  + +++   +K + F
Sbjct:   81 VIVVKGAITGATKVKVGSNKSIIGRAGS-SLTGVGLYINKQENVIVRNMKISKVLADNGDRIGIQASSK-VWVDHCDLSSDKKNNGKDYYDGLLDITHASMAVTVSNTYIHDHYKGSLVGHSDSNSAEDTGKLYVTYANNHWYNVASRNPSVRFGNVHIFNNYAEKLETSGVNTRMGAQLLIESSVFSDTKKAVTF 274          
BLAST of BQ623501 vs. ExPASy Swiss-Prot
Match: PELE_DICD3 (Pectate lyase E OS=Dickeya dadantii (strain 3937) GN=pelE PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.502e-16
Identity = 59/173 (34.10%), Postives = 83/173 (47.98%), Query Frame = 1
Query:   91 RSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNL----------EFEGGKG--PDVDAIQIKPKSKHIWIDRCSLRD-----------------YDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRC--IRVTIHHCFFDGTRQRHPRVRYAKVHLYNN 516
            RS +S+ S  TI G G + K T   L +K   +VI+ NL           +E G G   + DA+ I   + H+W+D  ++ D                   DG +DI R S  +TVS   F  HDKT+LIG   ++ +     +RVT H+  FD   +R PRVR+  VH YNN
Sbjct:  121 RSQISIPSNTTIIGIGNKGKFTNGSLVVKGVSNVILRNLYIETPVDVAPHYEEGDGWNAEWDAVVID-STDHVWVDHVTISDGSLTDDKYTTKNGEKYVQHDGSLDIKRGSDYVTVSNSRFELHDKTILIGHSDNNGSQDAGKLRVTFHNNLFDRVGERTPRVRFGSVHAYNN 292          
The following BLAST results are available for this feature:
BLAST of BQ623501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
MPA11_AMBAR6.276e-2735.59Pollen allergen Amb a 1.1 OS=Ambrosia artemisiifol... [more]
PEL5_ARATH8.197e-2735.24Probable pectate lyase 5 OS=Arabidopsis thaliana G... [more]
MPAC1_CHAOB1.826e-2634.16Major pollen allergen Cha o 1 OS=Chamaecyparis obt... [more]
PEL8_ARATH3.115e-2633.61Probable pectate lyase 8 OS=Arabidopsis thaliana G... [more]
SBP_CRYJA6.939e-2635.02Sugi basic protein OS=Cryptomeria japonica PE=1 SV... [more]
PEL14_ARATH2.019e-2533.61Putative pectate lyase 14 OS=Arabidopsis thaliana ... [more]
PEL10_ARATH1.309e-2433.61Probable pectate lyase 10 OS=Arabidopsis thaliana ... [more]
MPA14_AMBAR3.223e-2335.14Pollen allergen Amb a 1.4 OS=Ambrosia artemisiifol... [more]
PELB_COLGL9.084e-1831.12Pectate lyase B OS=Colletotrichum gloeosporioides ... [more]
PELE_DICD38.502e-1634.10Pectate lyase E OS=Dickeya dadantii (strain 3937) ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00592 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00592 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623501 ID=BQ623501; Name=BQ623501; organism=Citrus sinensis; type=EST; length=692bp
GCTGATGACGGGCCAGGATCACTTCGAGAAGGATGCCGCATGAAAGAACC
TCTTTGGATTGTCTTTGAAGTGTCAGGCACCATTCATCTCCGCTCTCACT
TGAGTGTCTCATCTTACAAAACCATAGATGGCCGAGGACAAAGGGTGAAA
CTTACAGGAAAGGGTTTGAGGCTGAAGGAATGCGAACATGTTATAATATG
CAATCTAGAGTTTGAAGGTGGTAAAGGACCTGATGTTGATGCCATTCAAA
TAAAACCTAAGTCAAAACACATATGGATAGACCGTTGTAGTCTCCGTGAT
TATGATGATGGGCTGATAGATATCACCAGAGAAAGCACAGATATTACAGT
TTCTAGGTGTCACTTTTCATCACATGACAAGACCATGCTCATTGGAGCAG
ATCCCTCTCATGTTGCTGATAGATGTATTCGAGTGACCATTCATCATTGT
TTTTTTGATGGGACTCGACAACGACATCCACGTGTTAGATATGCTAAAGT
ACATCTGTATAACAATTACACCAGAAATTGGGGAATTTATGCTGTTTGTG
CCAGTGTTGATTCACAGATATACTCCCAATGTAATATATATGAAGCAGGA
CAGAAGAAGATGGCATTCAAGTATCTTACAGAGAAGGCATCAGACAAGGA
GGAGGCAAGATCTGGTTGCATAAGGGCTGAAGGGGGATTTGT
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