BQ623508

Overview
NameBQ623508
Unique NameBQ623508
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length649
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2169 contig Csv1_Contig2169:929..1577. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1AC_PORPU (Elongation factor 1-alpha C OS=Porphyra purpurea GN=TEF-C PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 1.190e-59
Identity = 100/141 (70.92%), Postives = 120/141 (85.11%), Query Frame = 2
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 481
            + FNVKNV+VKDLKRG+V  +SK+DP +  A+F +QVII+NHPG+I  GYAPVLDCHT+HIA KFSEL+ K+DRRSGK+LE  PK +K+GDA MVKM+ +KPM VE F+ YPPLGRFAVRDMRQTVAVGVIKSVEKK+  G
Sbjct:  300 VGFNVKNVSVKDLKRGYVCGDSKNDPPKGCASFNAQVIILNHPGEIHAGYAPVLDCHTAHIACKFSELILKMDRRSGKKLEDSPKMIKSGDAAMVKMVASKPMCVEAFTSYPPLGRFAVRDMRQTVAVGVIKSVEKKEVEG 440          

HSP 2 Score: 40.0466 bits (92), Expect = 1.190e-59
Identity = 18/21 (85.71%), Postives = 19/21 (90.48%), Query Frame = 1
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHHEAL +A PGDNVG
Sbjct:  281 VKSVEMHHEALTQAGPGDNVG 301          
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_PORYE (Elongation factor 1-alpha OS=Porphyra yezoensis PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.552e-59
Identity = 100/141 (70.92%), Postives = 120/141 (85.11%), Query Frame = 2
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 481
            + FNVKNV+VKDLKRG+V  +SK+DP +  A+F +QVII+NHPG+I  GYAPVLDCHT+HIA KFSEL+ K+DRRSGK+LE  PK +K+GDA MVKM+ +KPM VE F+ YPPLGRFAVRDMRQTVAVGVIKSVEKK+  G
Sbjct:  300 VGFNVKNVSVKDLKRGYVCGDSKNDPPKGCASFNAQVIILNHPGEIHAGYAPVLDCHTAHIACKFSELILKMDRRSGKKLEDTPKMIKSGDAAMVKMVASKPMCVEAFTQYPPLGRFAVRDMRQTVAVGVIKSVEKKEVEG 440          

HSP 2 Score: 40.0466 bits (92), Expect = 1.552e-59
Identity = 18/21 (85.71%), Postives = 19/21 (90.48%), Query Frame = 1
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHHEAL +A PGDNVG
Sbjct:  281 VKSVEMHHEALPQAGPGDNVG 301          
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_ARTSA (Elongation factor 1-alpha OS=Artemia salina PE=1 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 2.637e-59
Identity = 96/140 (68.57%), Postives = 121/140 (86.43%), Query Frame = 2
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPT 478
            + FNVKNV+VK+L+RG+VAS+SK++PAR + +F +QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K DRR+GK  E EPKF+K+GDA M+ ++P+KP+ VE FSD+PPLGRFAVRDMRQTVAVGVIKSV  KDPT
Sbjct:  308 VGFNVKNVSVKELRRGYVASDSKNNPARGSQDFFAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEAEPKFIKSGDAAMITLVPSKPLCVEAFSDFPPLGRFAVRDMRQTVAVGVIKSVNFKDPT 447          

HSP 2 Score: 40.817 bits (94), Expect = 2.637e-59
Identity = 17/21 (80.95%), Postives = 20/21 (95.24%), Query Frame = 1
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHHE+L++A PGDNVG
Sbjct:  289 VKSVEMHHESLEQASPGDNVG 309          
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_NEUCR (Elongation factor 1-alpha OS=Neurospora crassa GN=tef-1 PE=3 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 4.483e-59
Identity = 98/136 (72.06%), Postives = 121/136 (88.97%), Query Frame = 2
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 466
            + FNVKNV+VKD++RG VA +SK+DP   AA+FT+QVI++NHPGQ+G GYAPVLDCHT+HIA KF+EL+ KIDRR+GK +E  PKF+K+GDA +VKMIP+KPM VE F+DYPPLGRFAVRDMRQTVAVGVIK+V+K
Sbjct:  307 VGFNVKNVSVKDIRRGNVAGDSKNDPPAGAASFTAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFAELLEKIDRRTGKAVEASPKFIKSGDAAIVKMIPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKAVDK 442          

HSP 2 Score: 38.5058 bits (88), Expect = 4.483e-59
Identity = 16/21 (76.19%), Postives = 18/21 (85.71%), Query Frame = 1
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHHE L + +PGDNVG
Sbjct:  288 VKSVEMHHEQLAQGVPGDNVG 308          
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A1_DROME (Elongation factor 1-alpha 1 OS=Drosophila melanogaster GN=Ef1alpha48D PE=1 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 5.845e-59
Identity = 92/141 (65.25%), Postives = 120/141 (85.11%), Query Frame = 2
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 481
            + FNVKNV+VK+L+RG+VA +SK +P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRRSGK  E+ PKF+K+GDA +V ++P+KP+ VE F ++PPLGRFAVRDMRQTVAVGVIK+V  KD +G
Sbjct:  308 VGFNVKNVSVKELRRGYVAGDSKANPPKGAADFTAQVIVLNHPGQIANGYTPVLDCHTAHIACKFAEIKEKVDRRSGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKDASG 448          

HSP 2 Score: 45.4394 bits (106), Expect = 5.845e-59
Identity = 20/21 (95.24%), Postives = 21/21 (100.00%), Query Frame = 1
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHHEALQEA+PGDNVG
Sbjct:  289 VKSVEMHHEALQEAVPGDNVG 309          
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A4_OSCTI (Elongation factor 1-alpha 4 OS=Oscheius tipulae GN=eft-4 PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.846e-59
Identity = 97/138 (70.29%), Postives = 120/138 (86.96%), Query Frame = 2
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 472
            + FN KNV+VKD++RG V S+SK+DPA+E+ +FT+QVI+MNHPGQIG GY PVLDCHT+HIA KF+EL  K+DRR+GK++E  PKFLK+GDAG+V++IPTKP+ VE F+DY PLGRFAVRDMRQTVAVGVIK V K D
Sbjct:  308 VGFNEKNVSVKDIRRGSVCSDSKNDPAKESKSFTAQVIVMNHPGQIGAGYTPVLDCHTAHIACKFAELKEKVDRRTGKKVEDLPKFLKSGDAGIVELIPTKPLCVEAFTDYAPLGRFAVRDMRQTVAVGVIKGVTKDD 445          

HSP 2 Score: 41.2022 bits (95), Expect = 5.846e-59
Identity = 18/25 (72.00%), Postives = 20/25 (80.00%), Query Frame = 1
Query:    1 VKSVEMHHEALQEALPGDNVGLQRE 75
            VKSVEMHHE+L EA PGDNVG   +
Sbjct:  289 VKSVEMHHESLPEAQPGDNVGFNEK 313          
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_COCIM (Elongation factor 1-alpha OS=Coccidioides immitis GN=TEF PE=2 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 7.621e-59
Identity = 98/141 (69.50%), Postives = 122/141 (86.52%), Query Frame = 2
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 481
            + FNVKNV+VK+++RG VA +SK+DP +   +F +QVI++NHPGQ+G GYAPVLDCHT+HIA KFSEL+ KIDRR+GK +E  PKF+K+GDA +VKM+P+KPM VE F+DYPPLGRFAVRDMRQTVAVGVIKSVEK + TG
Sbjct:  307 VGFNVKNVSVKEVRRGNVAGDSKNDPPKGCDSFNAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFSELLEKIDRRTGKSVENNPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVEKSEKTG 447          

HSP 2 Score: 35.8094 bits (81), Expect = 7.621e-59
Identity = 15/21 (71.43%), Postives = 17/21 (80.95%), Query Frame = 1
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHH+ L +  PGDNVG
Sbjct:  288 VKSVEMHHQQLTQGNPGDNVG 308          
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_SORMA (Elongation factor 1-alpha OS=Sordaria macrospora GN=TEF PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 7.621e-59
Identity = 98/136 (72.06%), Postives = 121/136 (88.97%), Query Frame = 2
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 466
            + FNVKNV+VKD++RG VA +SK+DP   AA+FT+QVI++NHPGQ+G GYAPVLDCHT+HIA KF+EL+ KIDRR+GK +E  PKF+K+GDA +VKMIP+KPM VE F+DYPPLGRFAVRDMRQTVAVGVIK+V+K
Sbjct:  307 VGFNVKNVSVKDIRRGNVAGDSKNDPPVGAASFTAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFAELLEKIDRRTGKAVETSPKFIKSGDAAIVKMIPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKAVDK 442          

HSP 2 Score: 38.5058 bits (88), Expect = 7.621e-59
Identity = 16/21 (76.19%), Postives = 18/21 (85.71%), Query Frame = 1
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHHE L + +PGDNVG
Sbjct:  288 VKSVEMHHEQLAQGVPGDNVG 308          
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_TRIRE (Elongation factor 1-alpha OS=Trichoderma reesei GN=tef1 PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 9.937e-59
Identity = 98/136 (72.06%), Postives = 120/136 (88.24%), Query Frame = 2
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 466
            + FNVKNV+VK+++RG VA +SK+DP   AA+FT+QVI+MNHPGQ+G GYAPVLDCHT+HIA KF+EL+ KIDRR+GK  E  PKF+K+GD+ +VKMIP+KPM VE F+DYPPLGRFAVRDMRQTVAVGVIK+VEK
Sbjct:  307 VGFNVKNVSVKEIRRGNVAGDSKNDPPMGAASFTAQVIVMNHPGQVGAGYAPVLDCHTAHIACKFAELLEKIDRRTGKATESAPKFIKSGDSAIVKMIPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKAVEK 442          

HSP 2 Score: 38.5058 bits (88), Expect = 9.937e-59
Identity = 17/21 (80.95%), Postives = 17/21 (80.95%), Query Frame = 1
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHHE L E  PGDNVG
Sbjct:  288 VKSVEMHHEQLAEGQPGDNVG 308          
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_CANAL (Elongation factor 1-alpha OS=Candida albicans GN=TEF1 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 9.937e-59
Identity = 97/141 (68.79%), Postives = 119/141 (84.40%), Query Frame = 2
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 481
            + FNVKNV+VK+++RG V  +SK+DP +   +F +QVI++NHPGQI  GY+PVLDCHT+HIA KF  LV KIDRR+GK+LE+ PKF+K+GDA +VKM+PTKPM VE F+DYPPLGRFAVRDMRQTVAVGVIKSVEK D  G
Sbjct:  306 VGFNVKNVSVKEIRRGNVCGDSKNDPPKGCDSFNAQVIVLNHPGQISAGYSPVLDCHTAHIACKFDTLVEKIDRRTGKKLEENPKFVKSGDAAIVKMVPTKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVEKSDKAG 446          

HSP 2 Score: 39.6614 bits (91), Expect = 9.937e-59
Identity = 17/21 (80.95%), Postives = 18/21 (85.71%), Query Frame = 1
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHHE L E +PGDNVG
Sbjct:  287 VKSVEMHHEQLAEGVPGDNVG 307          
The following BLAST results are available for this feature:
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
EF1AC_PORPU1.190e-5970.92Elongation factor 1-alpha C OS=Porphyra purpurea G... [more]
EF1A_PORYE1.552e-5970.92Elongation factor 1-alpha OS=Porphyra yezoensis PE... [more]
EF1A_ARTSA2.637e-5968.57Elongation factor 1-alpha OS=Artemia salina PE=1 S... [more]
EF1A_NEUCR4.483e-5972.06Elongation factor 1-alpha OS=Neurospora crassa GN=... [more]
EF1A1_DROME5.845e-5965.25Elongation factor 1-alpha 1 OS=Drosophila melanoga... [more]
EF1A4_OSCTI5.846e-5970.29Elongation factor 1-alpha 4 OS=Oscheius tipulae GN... [more]
EF1A_COCIM7.621e-5969.50Elongation factor 1-alpha OS=Coccidioides immitis ... [more]
EF1A_SORMA7.621e-5972.06Elongation factor 1-alpha OS=Sordaria macrospora G... [more]
EF1A_TRIRE9.937e-5972.06Elongation factor 1-alpha OS=Trichoderma reesei GN... [more]
EF1A_CANAL9.937e-5968.79Elongation factor 1-alpha OS=Candida albicans GN=T... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00599 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00599 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623508 ID=BQ623508; Name=BQ623508; organism=Citrus sinensis; type=EST; length=649bp
GTTAAGTCTGTTGAGATGCACCACGAAGCTCTGCAGGAGGCCCTTCCGGG
TGACAATGTTGGCCTTCAACGTGAAGAACGTTGCTGTCAAGGATCTCAAG
CGTGGTTTTGTTGCTTCCAACTCGAAGGATGATCCGGCCAGGGAAGCTGC
CAACTTCACTTCACAGGTCATCATCATGAACCATCCTGGCCAGATTGGAA
ATGGATATGCCCCAGTGCTTGACTGCCACACCTCCCACATTGCCGTCAAG
TTTTCTGAGCTCGTGACGAAGATTGATAGGCGATCAGGCAAGGAGCTTGA
GAAGGAGCCCAAGTTCTTGAAGAATGGAGATGCCGGAATGGTTAAGATGA
TTCCCACCAAGCCCATGGTTGTTGAGACATTCTCCGACTACCCACCCCTT
GGTCGTTTTGCTGTTAGGGACATGCGTCAGACTGTTGCTGTGGGTGTTAT
CAAGAGTGTTGAGAAGAAGGATCCCACAGGTGCCAAGGTCACCAAGTCCG
CAGCCAAGAAGAAATGAGAAATTTTTATGGGTCTGTCTACAATAGTTAGG
GTTTATTTTCTGGCTTTTTTATTTTCTTTTCTGGTTTTGGTTTGCATCAA
TGTTTCTGCAAACAGCCCTATTTGCTTCCACCAGTTTGCTGGTGAGCAT
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