BQ623508

Overview
NameBQ623508
Unique NameBQ623508
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length649
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2169 contig Csv1_Contig2169:929..1577. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_STYLE (Elongation factor 1-alpha OS=Stylonychia lemnae GN=EFAA PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 9.939e-59
Identity = 95/141 (67.38%), Postives = 121/141 (85.82%), Query Frame = 2
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 481
            + F VKN++VKDL+RG+VAS+SK+DPA++  NF +QVI++NHPGQI  GYAPVLDCHT+HIA KF E+ +K+DRRSGK LE+EPKF+K+G+A +V+M+P KPM VE F+ YPPLGRFAVRDM+QTVAVGVIK V KK+  G
Sbjct:  296 VGFTVKNLSVKDLRRGYVASDSKNDPAKDTTNFLAQVIVLNHPGQIQKGYAPVLDCHTAHIACKFDEIESKVDRRSGKVLEEEPKFIKSGEAALVRMVPQKPMCVEAFNQYPPLGRFAVRDMKQTVAVGVIKEVVKKEQKG 436          

HSP 2 Score: 38.891 bits (89), Expect = 9.939e-59
Identity = 17/20 (85.00%), Postives = 18/20 (90.00%), Query Frame = 1
Query:    4 KSVEMHHEALQEALPGDNVG 63
            KSVEMHHE+L EA PGDNVG
Sbjct:  278 KSVEMHHESLTEAEPGDNVG 297          
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_AJECG (Elongation factor 1-alpha OS=Ajellomyces capsulata (strain ATCC 26029 / G186AR / H82 / RMSCC 2432) GN=TEF PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.689e-58
Identity = 97/140 (69.29%), Postives = 120/140 (85.71%), Query Frame = 2
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPT 478
            + FNVKNV+VK+++RG VA +SK+DP +   +F +QVI++NHPGQ+G GYAPVLDCHT+HIA KFSEL+ KIDRR+GK +E  PKF+K+GDA +VKM+P+KPM VE F+DYPPLGRFAVRDMRQTVAVGVIKSV K D T
Sbjct:  307 VGFNVKNVSVKEVRRGNVAGDSKNDPPKGCESFNAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFSELIEKIDRRTGKSVENNPKFIKSGDAAIVKMVPSKPMCVEPFTDYPPLGRFAVRDMRQTVAVGVIKSVIKSDKT 446          

HSP 2 Score: 37.7354 bits (86), Expect = 1.689e-58
Identity = 16/21 (76.19%), Postives = 17/21 (80.95%), Query Frame = 1
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHH+ LQ   PGDNVG
Sbjct:  288 VKSVEMHHQQLQAGYPGDNVG 308          
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_PODAN (Elongation factor 1-alpha OS=Podospora anserina GN=TEF PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 1.689e-58
Identity = 96/136 (70.59%), Postives = 120/136 (88.24%), Query Frame = 2
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 466
            + FNVKNV+VK+++RG VA +SK+DP   AA+F +QVI++NHPGQ+G GYAPVLDCHT+HIA KFSEL+ KIDRR+GK +E+ PKF+K+GDA +VKM+P+KPM VE F++YPPLGRFAVRDMRQTVAVGVIK VEK
Sbjct:  307 VGFNVKNVSVKEIRRGNVAGDSKNDPPMGAASFDAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFSELLQKIDRRTGKAVEESPKFIKSGDAAIVKMVPSKPMCVEAFTEYPPLGRFAVRDMRQTVAVGVIKKVEK 442          

HSP 2 Score: 39.6614 bits (91), Expect = 1.689e-58
Identity = 17/21 (80.95%), Postives = 18/21 (85.71%), Query Frame = 1
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHHE L E +PGDNVG
Sbjct:  288 VKSVEMHHEQLAEGVPGDNVG 308          
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_ARXAD (Elongation factor 1-alpha OS=Arxula adeninivorans GN=TEF PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.689e-58
Identity = 97/138 (70.29%), Postives = 119/138 (86.23%), Query Frame = 2
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 472
            + FNVKNV+VK+++RG VA +SK+DP +   +FT+QVII NHPGQI  GY+PVLDCHT+HIA +F EL+ KIDRRSGK++E  PKF+K GDA +V+MIP+KPM VETF++YPPLGRFAVRDMRQTVAVGVIKSVEK D
Sbjct:  306 VGFNVKNVSVKEIRRGNVAGDSKNDPPKGCDSFTAQVIIFNHPGQISAGYSPVLDCHTAHIACRFDELIEKIDRRSGKKVEDSPKFVKAGDAAIVRMIPSKPMCVETFTEYPPLGRFAVRDMRQTVAVGVIKSVEKSD 443          

HSP 2 Score: 40.817 bits (94), Expect = 1.689e-58
Identity = 18/21 (85.71%), Postives = 18/21 (85.71%), Query Frame = 1
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHHE L E LPGDNVG
Sbjct:  287 VKSVEMHHEQLPEGLPGDNVG 307          
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_PODCU (Elongation factor 1-alpha OS=Podospora curvicolla GN=TEF PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 2.871e-58
Identity = 96/136 (70.59%), Postives = 120/136 (88.24%), Query Frame = 2
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 466
            + FNVKNV+VK+++RG VA +SK+DP   AA+F +QVI++NHPGQ+G GYAPVLDCHT+HIA KF+EL+ KIDRR+GK +E+ PKF+K+GDA +VKMIP+KPM VE F++YPPLGRFAVRDMRQTVAVGVIK VEK
Sbjct:  307 VGFNVKNVSVKEIRRGNVAGDSKNDPPLGAASFDAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFAELLQKIDRRTGKAVEESPKFIKSGDAAIVKMIPSKPMCVEAFTEYPPLGRFAVRDMRQTVAVGVIKKVEK 442          

HSP 2 Score: 40.0466 bits (92), Expect = 2.871e-58
Identity = 17/21 (80.95%), Postives = 18/21 (85.71%), Query Frame = 1
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHHE L E +PGDNVG
Sbjct:  288 VKSVEMHHEQLSEGVPGDNVG 308          
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_PUCGR (Elongation factor 1-alpha OS=Puccinia graminis GN=TEF PE=3 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 3.743e-58
Identity = 98/138 (71.01%), Postives = 118/138 (85.51%), Query Frame = 2
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 472
            + FNVKNV+VKD++RG V  ++K DP +EAA+F +QVI++NHPGQIGNGY PVLDCHT+HIA KF  L  KIDRR+GK LE+ PKF+K+GDA +VKM+P+K M VE F+DYPPLGRFAVRDMRQTVAVGVIKSVEK D
Sbjct:  305 VGFNVKNVSVKDIRRGNVCGDTKCDPPKEAASFVAQVIVLNHPGQIGNGYCPVLDCHTAHIACKFDTLQQKIDRRTGKALEEAPKFVKSGDACLVKMVPSKAMCVEPFADYPPLGRFAVRDMRQTVAVGVIKSVEKTD 442          

HSP 2 Score: 38.891 bits (89), Expect = 3.743e-58
Identity = 16/21 (76.19%), Postives = 18/21 (85.71%), Query Frame = 1
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHHE L+  +PGDNVG
Sbjct:  286 VKSVEMHHEQLEAGMPGDNVG 306          
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_CRYNE (Elongation factor 1-alpha OS=Cryptococcus neoformans GN=TEF1 PE=2 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 6.363e-58
Identity = 94/141 (66.67%), Postives = 120/141 (85.11%), Query Frame = 2
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 481
            + FNVKNV++KD++RG V  +SK+DP  EAA+F +QVI++NHPGQIG GY PVLDCHT+HIA KF+EL+ KIDRR+GK +E  PKF+K+GDA +VK++  KP+ VET++DYPPLGRFAVRDMRQTVAVGVIKSV+K +  G
Sbjct:  306 VGFNVKNVSIKDIRRGNVCGDSKNDPPMEAASFNAQVIVLNHPGQIGAGYTPVLDCHTAHIACKFAELIEKIDRRTGKVMEAAPKFVKSGDAAIVKLVAQKPLCVETYADYPPLGRFAVRDMRQTVAVGVIKSVDKTEKGG 446          

HSP 2 Score: 40.0466 bits (92), Expect = 6.363e-58
Identity = 17/21 (80.95%), Postives = 18/21 (85.71%), Query Frame = 1
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHHE + E LPGDNVG
Sbjct:  287 VKSVEMHHEQIPEGLPGDNVG 307          
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_PICGU (Elongation factor 1-alpha OS=Pichia guilliermondii GN=TEF1 PE=3 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 6.363e-58
Identity = 95/141 (67.38%), Postives = 119/141 (84.40%), Query Frame = 2
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 481
            + FNVKNV+VK+++RG V  +SK+DP +   +FT+QVI++NHPGQI  GY+PVLDCHT+HIA KF  L+ KIDRR+GK++E  PKF+K+GDA +VKM+P+KPM VE F+DYPPLGRFAVRDMRQTVAVGVIKSVEK D  G
Sbjct:  306 VGFNVKNVSVKEIRRGNVCGDSKNDPPKGCDSFTAQVIVLNHPGQISAGYSPVLDCHTAHIACKFDTLLEKIDRRTGKKMEDNPKFVKSGDASIVKMVPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVEKSDKAG 446          

HSP 2 Score: 39.2762 bits (90), Expect = 6.363e-58
Identity = 17/21 (80.95%), Postives = 18/21 (85.71%), Query Frame = 1
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHHE L E +PGDNVG
Sbjct:  287 VKSVEMHHEQLVEGVPGDNVG 307          
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_ASPOR (Elongation factor 1-alpha OS=Aspergillus oryzae GN=tef1 PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 8.295e-58
Identity = 96/136 (70.59%), Postives = 121/136 (88.97%), Query Frame = 2
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 466
            + FNVKNV+VK+++RG VA +SK+DP     +F +QVI++NHPGQ+GNGYAPVLDCHT+HIA KF+EL+ KIDRR+GK +E +PKF+K+GDA +VKMIP+KPM VE+F+D+PPLGRFAVRDMRQTVAVGVIKSVEK
Sbjct:  307 VGFNVKNVSVKEVRRGNVAGDSKNDPPAGCDSFNAQVIVLNHPGQVGNGYAPVLDCHTAHIACKFAELLEKIDRRTGKSVEDKPKFIKSGDAAIVKMIPSKPMCVESFTDFPPLGRFAVRDMRQTVAVGVIKSVEK 442          

HSP 2 Score: 36.965 bits (84), Expect = 8.295e-58
Identity = 16/21 (76.19%), Postives = 17/21 (80.95%), Query Frame = 1
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHH+ LQ   PGDNVG
Sbjct:  288 VKSVEMHHQQLQAGNPGDNVG 308          
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_HYDAT (Elongation factor 1-alpha OS=Hydra attenuata PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 1.081e-57
Identity = 95/136 (69.85%), Postives = 118/136 (86.76%), Query Frame = 2
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 466
            + FNVKNV++KD++RG VAS+SK+DPA EAA+F +QVII+NHPG+I  GY PVLDCHT+HIA KF+EL+ KIDRRSGK +E EPK +K+GDA ++ +IP+K M VE+FS YPPLGRFAVRDMRQTVAVGVIK V+K
Sbjct:  310 VGFNVKNVSIKDIRRGMVASDSKNDPAIEAASFKAQVIILNHPGEIHAGYQPVLDCHTAHIACKFAELLEKIDRRSGKVIETEPKMVKSGDAAIINLIPSKGMCVESFSQYPPLGRFAVRDMRQTVAVGVIKEVDK 445          

HSP 2 Score: 43.1282 bits (100), Expect = 1.081e-57
Identity = 19/21 (90.48%), Postives = 20/21 (95.24%), Query Frame = 1
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHHE+L EALPGDNVG
Sbjct:  291 VKSVEMHHESLPEALPGDNVG 311          
The following BLAST results are available for this feature:
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
EF1A_STYLE9.939e-5967.38Elongation factor 1-alpha OS=Stylonychia lemnae GN... [more]
EF1A_AJECG1.689e-5869.29Elongation factor 1-alpha OS=Ajellomyces capsulata... [more]
EF1A_PODAN1.689e-5870.59Elongation factor 1-alpha OS=Podospora anserina GN... [more]
EF1A_ARXAD1.689e-5870.29Elongation factor 1-alpha OS=Arxula adeninivorans ... [more]
EF1A_PODCU2.871e-5870.59Elongation factor 1-alpha OS=Podospora curvicolla ... [more]
EF1A_PUCGR3.743e-5871.01Elongation factor 1-alpha OS=Puccinia graminis GN=... [more]
EF1A_CRYNE6.363e-5866.67Elongation factor 1-alpha OS=Cryptococcus neoforma... [more]
EF1A_PICGU6.363e-5867.38Elongation factor 1-alpha OS=Pichia guilliermondii... [more]
EF1A_ASPOR8.295e-5870.59Elongation factor 1-alpha OS=Aspergillus oryzae GN... [more]
EF1A_HYDAT1.081e-5769.85Elongation factor 1-alpha OS=Hydra attenuata PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00599 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00599 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623508 ID=BQ623508; Name=BQ623508; organism=Citrus sinensis; type=EST; length=649bp
GTTAAGTCTGTTGAGATGCACCACGAAGCTCTGCAGGAGGCCCTTCCGGG
TGACAATGTTGGCCTTCAACGTGAAGAACGTTGCTGTCAAGGATCTCAAG
CGTGGTTTTGTTGCTTCCAACTCGAAGGATGATCCGGCCAGGGAAGCTGC
CAACTTCACTTCACAGGTCATCATCATGAACCATCCTGGCCAGATTGGAA
ATGGATATGCCCCAGTGCTTGACTGCCACACCTCCCACATTGCCGTCAAG
TTTTCTGAGCTCGTGACGAAGATTGATAGGCGATCAGGCAAGGAGCTTGA
GAAGGAGCCCAAGTTCTTGAAGAATGGAGATGCCGGAATGGTTAAGATGA
TTCCCACCAAGCCCATGGTTGTTGAGACATTCTCCGACTACCCACCCCTT
GGTCGTTTTGCTGTTAGGGACATGCGTCAGACTGTTGCTGTGGGTGTTAT
CAAGAGTGTTGAGAAGAAGGATCCCACAGGTGCCAAGGTCACCAAGTCCG
CAGCCAAGAAGAAATGAGAAATTTTTATGGGTCTGTCTACAATAGTTAGG
GTTTATTTTCTGGCTTTTTTATTTTCTTTTCTGGTTTTGGTTTGCATCAA
TGTTTCTGCAAACAGCCCTATTTGCTTCCACCAGTTTGCTGGTGAGCAT
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