BQ623512
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.176e-16 Identity = 48/91 (52.75%), Postives = 60/91 (65.93%), Query Frame = 2 Query: 2 EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPL 256 +V+++G IE R LDP LYPG F DPLGLA DPE KA L++ EIK+ RLAM + GF VQA+VTGKGP+ N HL+DP+ Sbjct: 49 QVVLMGLIEGYRVGGGPLGEGLDP---LYPGDAF-DPLGLADDPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPV 135
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.176e-16 Identity = 46/92 (50.00%), Postives = 62/92 (67.39%), Query Frame = 2 Query: 2 EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 259 +V+++G +E R +DP LYPGG F DPLGLA DPE A L++ E+K+ RLAM + GF VQA+VTGKGPL N A H++DP++ Sbjct: 161 QVVLMGAVEGYRIAGGPLGEVVDP---LYPGGSF-DPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVN 248
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 8.066e-16 Identity = 47/92 (51.09%), Postives = 62/92 (67.39%), Query Frame = 2 Query: 2 EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 259 +V+++G IE R +DP LYPGG F DPLGLA DPE A +++ E+K+ RLAM + GF VQA+VTGKGPL N A HL+DP++ Sbjct: 164 QVVLMGAIEGYRVAGGPLGEVVDP---LYPGGTF-DPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.053e-15 Identity = 46/92 (50.00%), Postives = 61/92 (66.30%), Query Frame = 2 Query: 2 EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 259 +V+++G +E R DP +YPGG F DPLGLA DPE A L++ E+K+ RLAM + GF VQA+VTGKGPL N A HL+DP++ Sbjct: 105 QVVLMGAVEGYRIAGGPLGEVTDP---IYPGGSF-DPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 192
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.053e-15 Identity = 46/92 (50.00%), Postives = 61/92 (66.30%), Query Frame = 2 Query: 2 EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 259 +V+++G +E R DP +YPGG F DPLGLA DPE A L++ E+K+ RLAM + GF VQA+VTGKGPL N A HL+DP++ Sbjct: 154 QVVLMGAVEGYRIAGGPLGEVTDP---IYPGGSF-DPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 241
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.376e-15 Identity = 46/92 (50.00%), Postives = 61/92 (66.30%), Query Frame = 2 Query: 2 EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 259 +V+++G IE R DP +YPGG F DPLGLA DP+ A L++ EIK+ RLAM + GF VQA+VTGKGP+ N A HL+DP++ Sbjct: 177 QVILMGAIEGYRVAGGPLGEVTDP---IYPGGNF-DPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 264
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.376e-15 Identity = 47/92 (51.09%), Postives = 61/92 (66.30%), Query Frame = 2 Query: 2 EVLVIGYIEFQRNSE------LDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 259 +VL++G +E R + +DP LYPGG F DPLGLA DPE A L++ E K+ RLAM + GF +QA+VTGKGPL N A HL DP++ Sbjct: 166 QVLLMGAVEGYRVAGGPLGVVVDP---LYPGGSF-DPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVN 253
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.376e-15 Identity = 45/91 (49.45%), Postives = 61/91 (67.03%), Query Frame = 2 Query: 2 EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPL 256 +V+++G++E R LDP +YPGG F DPLGLA DP+ A L++ EIK+ RLAM + GF VQA+VTGKGP+ N HL+DP+ Sbjct: 164 QVVLMGFVEGYRVGGGPLGEGLDP---IYPGGAF-DPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPV 250
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.797e-15 Identity = 48/89 (53.93%), Postives = 60/89 (67.42%), Query Frame = 2 Query: 2 EVLVIGYIEFQR---NSE--LDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDP 253 +V+++G E R SE LD LYPGG F DPLGLA DP+ A L++ EIK+ RLAM + LGF VQA+VTGKGP+ N HL+DP Sbjct: 150 QVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPF-DPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADP 237
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.797e-15 Identity = 44/91 (48.35%), Postives = 62/91 (68.13%), Query Frame = 2 Query: 2 EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPL 256 +V+++G++E R LD ++YPGG F DPLGLA DPE A L++ EIK+ RLAM + GF VQA+VTGKGP+ N + H++DP+ Sbjct: 136 QVVLMGFVEGYRVGGGPLGEGLD---KIYPGGAF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPV 222 The following BLAST results are available for this feature:
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623512 ID=BQ623512; Name=BQ623512; organism=Citrus sinensis; type=EST; length=522bpback to top |