BQ623512
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 6.828e-15 Identity = 45/92 (48.91%), Postives = 60/92 (65.22%), Query Frame = 2 Query: 2 EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 259 +V+++G +E R DP +YPGG F DPL LA DPE A L++ EIK+ RLAM + GF VQA+VTGKGPL N A HL++P++ Sbjct: 144 QVILMGAVEGYRIAGGPLGEVTDP---IYPGGSF-DPLALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVN 231
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 6.828e-15 Identity = 47/91 (51.65%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 2 EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPL 256 +V+++G IE R LDP L PGG F DPLGLA DPE A L++ EIK+ RLAM + GF VQA+VTGKGP+ N HL+DP+ Sbjct: 165 QVVLMGLIEGYRVGGGTLGEGLDP---LLPGGAF-DPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPV 251
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 8.918e-15 Identity = 45/91 (49.45%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 2 EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPL 256 +V+++G +E R DP +YPGG F DPLGLA DP+ A L++ EIK+ RLAM + GF VQA+VTGKGPL N HL+DP+ Sbjct: 167 QVVLMGAVEGYRVAGGPLGEVTDP---IYPGGSF-DPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPV 253
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 8.918e-15 Identity = 46/90 (51.11%), Postives = 60/90 (66.67%), Query Frame = 2 Query: 2 EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDP 253 +V+++G +E R LDP LYPG + FDPLGLA DP+ A L++ EIK+ RLAM A LGF VQA+VTGKGP+ N HL++P Sbjct: 173 QVVLMGLVEGYRVNGGPAGEGLDP---LYPG-EAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANP 258
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.165e-14 Identity = 45/91 (49.45%), Postives = 60/91 (65.93%), Query Frame = 2 Query: 2 EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPL 256 +V+++G IE R LD ++YPGG F DPLGLA DPE A L++ EIK+ RLAM + GF VQA+VTGKGP+ N H++DP+ Sbjct: 164 QVVLMGLIEGYRVGGGPLGEGLD---KIYPGGAF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPV 250
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.165e-14 Identity = 45/92 (48.91%), Postives = 60/92 (65.22%), Query Frame = 2 Query: 2 EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 259 +V+++G +E R +DP LYPGG F DPLGLA PE A L++ E+K+ RLAM + GF V A+VTGKGPL N A HL+DP++ Sbjct: 127 QVILMGAVEGYRIAGGPLGEVVDP---LYPGGSF-DPLGLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVN 214
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.521e-14 Identity = 39/65 (60.00%), Postives = 49/65 (75.38%), Query Frame = 2 Query: 65 LYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 259 LY GG F DPLGL DPE+ A L++ EIK+ RLAM + GF VQA+VTGKGP+ N A HL+DP++ Sbjct: 187 LYLGGSF-DPLGLGDDPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLTDPVN 250
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.595e-14 Identity = 42/91 (46.15%), Postives = 61/91 (67.03%), Query Frame = 2 Query: 2 EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPL 256 +V+++G++E R LD ++YPGG F DPLGLA DP+ A L++ E+K+ RLAM + GF VQA+VTGKGP+ N H++DP+ Sbjct: 162 QVVLMGFVEGYRVGGGPLGEGLD---KVYPGGAF-DPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPV 248
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.595e-14 Identity = 42/91 (46.15%), Postives = 61/91 (67.03%), Query Frame = 2 Query: 2 EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPL 256 +V+++G++E R LD ++YPGG F DPLGLA DP+ A L++ E+K+ RLAM + GF VQA+VTGKGP+ N H++DP+ Sbjct: 162 QVVLMGFVEGYRVGGGPLGEGLD---KVYPGGAF-DPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPV 248
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.595e-14 Identity = 44/92 (47.83%), Postives = 61/92 (66.30%), Query Frame = 2 Query: 2 EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 259 +V+++G +E R +DP LYPGG F DPLGLA P+ A L++ EIK+ RLAM + GF VQA+VTGKGPL + A H++DP++ Sbjct: 165 QVVLMGAVEGYRIAGGPLGEIVDP---LYPGGSF-DPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVN 252 The following BLAST results are available for this feature:
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623512 ID=BQ623512; Name=BQ623512; organism=Citrus sinensis; type=EST; length=522bpback to top |