BQ623518

Overview
NameBQ623518
Unique NameBQ623518
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length631
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig906 contig Csv1_Contig906:124..752. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623518 vs. ExPASy Swiss-Prot
Match: 6PGL_ANASP (6-phosphogluconolactonase OS=Anabaena sp. (strain PCC 7120) GN=pgl PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 8.182e-12
Identity = 46/126 (36.51%), Postives = 63/126 (50.00%), Query Frame = 1
Query:  178 KEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAI-----NDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGYG 540
            K++G FT+ LSGGS   + + L E      + W K HVFW DER V  DH DSN  +A   +L +V I   N++A+     N A+SA    +  +T             SA   FP  D++LLG G
Sbjct:   31 KQQGRFTIALSGGS---TPKPLYEAIAAQKLPWDKIHVFWGDERYVSPDHPDSNELMARTAWLDRVDIPAENIHAVPTLDNNPAVSAAKYEQHLQT----------FFNSAPGEFPALDVVLLGMG 143          
BLAST of BQ623518 vs. ExPASy Swiss-Prot
Match: 6PGL_SYNY3 (6-phosphogluconolactonase OS=Synechocystis sp. (strain PCC 6803) GN=pgl PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 1.823e-11
Identity = 49/124 (39.52%), Postives = 64/124 (51.61%), Query Frame = 1
Query:  181 EKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAI-NDALSAEGAAEDYETCLKHLTKSNILAT---SAATGFPKFDLMLLGYG 540
            E+G  T+ LSGG+   + + L E     ++ W K HVFW DER V  DH DSN ++A   +L QV I   N++ +   A   E  A+ YE         N LAT     A  FP FDL+LLG G
Sbjct:   32 ERGQGTIALSGGN---TPKPLYEALARQALPWEKIHVFWGDERYVSVDHPDSNQRMARLAWLDQVDIPEANIHPMPTAAADPEQDAQTYE---------NELATFFQVEAGHFPAFDLILLGLG 143          
The following BLAST results are available for this feature:
BLAST of BQ623518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
6PGL_ANASP8.182e-1236.516-phosphogluconolactonase OS=Anabaena sp. (strain ... [more]
6PGL_SYNY31.823e-1139.526-phosphogluconolactonase OS=Synechocystis sp. (st... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00609 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00609 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623518 ID=BQ623518; Name=BQ623518; organism=Citrus sinensis; type=EST; length=631bp
TTTCGAAACATTTCCCTTGATCGGAACAAATCATCGGACTGCGTGAGAAT
CAAGGCATCATCATCAATGGCTGCCGAGAATAAGAACAAGAACAAGAACG
TACAAGTTTTTGACTCAGAGGAAGATCTGGCTGTGTCTTTGGCCAAATAC
ACCGCCGATCTATCTGCCAAGTTCGGTAAAGAGAAGGGCTCCTTCACTGT
CGTCTTATCCGGTGGTTCTCTCATCGACTCCCTCAGGAAATTAGTGGAAC
CCCCGTATGTAGATTCAATTGAATGGGCGAAATGGCATGTGTTTTGGGTT
GATGAAAGAGTTGTTCCCAAGGATCATGATGATAGCAATTATAAGCTTGC
TTATGATGGTTTCCTTTCTCAGGTACCAATTACCACTGGCAATGTCTATG
CCATCAATGATGCATTATCTGCTGAAGGTGCAGCTGAAGATTACGAGACT
TGTCTCAAGCATTTGACAAAGAGCAATATATTAGCTACATCTGCTGCTAC
TGGTTTTCCAAAGTTTGATCTCATGCTTCTGGGGTATGGGTCCAGATGGA
CATATAGCTTTCTCTGTTTCCAGGGCATCCTCTTCTCAAGGAGAATGAGA
AATGGGTTACTTTCATTAAAGACTCGCCACA
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