BQ623525

Overview
NameBQ623525
Unique NameBQ623525
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length695
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA_CAEEL (Probable glutamine synthetase OS=Caenorhabditis elegans GN=gln-2 PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 6.635e-46
Identity = 76/158 (48.10%), Postives = 100/158 (63.29%), Query Frame = 2
Query:    2 RHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKP--IQGDWNGAGAHANYSTKSMRNDGG 469
            R A A+I    ++    PW+G+EQEY ++ +D + PL                   AD+A+GR++V++HY+ACL+AG+NI G N EV PGQWEFQ+G   GI  GDQLW++RYIL R+ E  GV +S DPKP    GDWNGAG H N+ST  MR  GG
Sbjct:  118 RQACAEIMH--EIRDTRPWFGMEQEYLIVDRD-EHPLGWPKHGFPDPQGKYYCSVGADRAFGREVVETHYRACLHAGLNIFGTNAEVTPGQWEFQIGTCEGIDMGDQLWMSRYILHRVAEQFGVCVSLDPKPKVTMGDWNGAGCHTNFSTAEMRAPGG 272          

HSP 2 Score: 49.2914 bits (116), Expect = 6.635e-46
Identity = 27/56 (48.21%), Postives = 35/56 (62.50%), Query Frame = 3
Query:  480 IKKAIEKLGLRHSEHIAAY----GEGNERRLTGKHETADINTFNGGVANRGASIRV 635
            I+ A+  L   H E +  Y    GE N RRLTG+HET+  + F+ GVANRG SIR+
Sbjct:  276 IEAAMTGLKRTHLEAMKVYDPHGGEDNLRRLTGRHETSSADKFSWGVANRGCSIRI 331          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA2_STRVR (Glutamine synthetase 2 OS=Streptomyces viridochromogenes GN=glnII PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 6.652e-45
Identity = 71/138 (51.45%), Postives = 88/138 (63.77%), Query Frame = 2
Query:   44 AEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMR 457
            A+EP +GIEQEYT  Q    +PL                   AD+ +GRD+V++H   CL AG+ ISGIN EVMPGQWEFQVGP   +   D LWVAR++L R  E   V  + DPKP++GDWNGAGAH N+STK+MR
Sbjct:  105 AQEPIFGIEQEYTFFQDG--YPLGFPKGGFPAPQGGYYCGVGADEIFGRDVVEAHLDNCLKAGLAISGINAEVMPGQWEFQVGPVSPLEVSDHLWVARWLLYRTAEDFDVAATLDPKPVKGDWNGAGAHTNFSTKAMR 240          

HSP 2 Score: 53.5286 bits (127), Expect = 6.652e-45
Identity = 28/66 (42.42%), Postives = 42/66 (63.64%), Query Frame = 3
Query:  465 EAFEGIKKAIEKLG--LRHSEHIAAYGEGNERRLTGKHETADINTFNGGVANRGASIRVGPDTEKE 656
            E+++ I  A E LG   +  +H+  YG G + RLTG HETA  N ++ GV++RGAS+R+    EK+
Sbjct:  241 ESYDAIITAAESLGEGSKPLDHVKNYGAGIDDRLTGLHETAPWNEYSYGVSDRGASVRIPWQVEKD 306          

HSP 3 Score: 23.0978 bits (48), Expect = 6.652e-45
Identity = 9/12 (75.00%), Postives = 9/12 (75.00%), Query Frame = 2
Query:  659 KGYFEDRRPAFN 694
            KGY EDRRP  N
Sbjct:  308 KGYIEDRRPNAN 319          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA_SQUAC (Glutamine synthetase, mitochondrial OS=Squalus acanthias PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.558e-44
Identity = 104/238 (43.70%), Postives = 132/238 (55.46%), Query Frame = 2
Query:    2 RHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGF*GY*ESN*ETWTEAQ*AHCRIW-------*RQ*TPTHWQT*NS*HQHFQWGCC*PWGINPCWTRHRERRKGYFEDRRPAFN 694
            RH+  KI S   +  E PW+G+EQEYTLL  D   P                    ADKA+GRDIV++HY+ACLYAGI +SG N EVM  QWE+QVGP  GI  GD LW++R+IL R+ E  G++ SFDPKPI G+WNGAG H N+STK+MR+DGG   Y E + E   +    H R +         +    H +T N     F  G               + +KGYFEDRRP+ N
Sbjct:  143 RHSCQKIMSM--IANEYPWFGMEQEYTLLGTDGH-PFGWPSNCFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGIELSGTNAEVMAAQWEYQVGPCEGIQMGDHLWISRFILHRVCEDFGIIASFDPKPIPGNWNGAGCHTNFSTKAMRDDGGL-KYIEDSIEKLGKRHQYHIRAYDPKGGLDNARALTGHHETSNI--NEFSAGVANRGASIRIPRSVGQDKKGYFEDRRPSAN 374          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA_CANFA (Glutamine synthetase OS=Canis familiaris GN=GLUL PE=1 SV=3)

HSP 1 Score: 176.022 bits (445), Expect = 1.658e-43
Identity = 105/240 (43.75%), Postives = 135/240 (56.25%), Query Frame = 2
Query:    2 RHAAAKIFSHSDVVAEE-PWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGF*GY*ESN*ETWTEAQ*AHCRIW--------*RQ*TPTHWQT*NS*HQHFQWGCC*PWGINPCWTRHRERRKGYFEDRRPAFN 694
            RH   +I    D+V+ + PW+G+EQEYTL+  D   P                    ADKA+GRDIV++HY+ACLYAGI I+G N EVMP QWEFQ+GP  GI  GD LWVAR+IL R+ E  GV+ +FDPKPI G+WNGAG H N+STK+MR + G   Y E + E  ++    H R +         R+ T  H +T N     F  G               + +KGYFEDRRP+ N
Sbjct:  114 RHTCKRIM---DMVSNQHPWFGMEQEYTLMGTDGH-PFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGIKIAGTNAEVMPAQWEFQIGPCEGIDMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGL-KYIEESIEKLSKRHQYHIRAYDPKGGLDNARRLTGFH-ETSNI--NDFSAGVANRGASIRIPRTVGQEKKGYFEDRRPSAN 345          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA_PIG (Glutamine synthetase OS=Sus scrofa GN=GLUL PE=2 SV=3)

HSP 1 Score: 174.866 bits (442), Expect = 3.694e-43
Identity = 105/240 (43.75%), Postives = 133/240 (55.42%), Query Frame = 2
Query:    2 RHAAAKIFSHSDVVAEE-PWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGF*GY*ESN*ETWTEAQ*AHCRIW--------*RQ*TPTHWQT*NS*HQHFQWGCC*PWGINPCWTRHRERRKGYFEDRRPAFN 694
            RH   +I    D+V+ + PW+G+EQEYTL+  D   P                    ADKA+GRDIV++HY+ACLYAGI I G N EVMP QWEFQ+GP  GI  GD LWVAR+IL R+ E  GV+ +FDPKPI G+WNGAG H N+STK+MR + G   Y E   E  ++    H R +         R+ T  H +T N     F  G               + +KGYFEDRRP+ N
Sbjct:  114 RHTCKRIM---DMVSNQHPWFGMEQEYTLMGTDGH-PFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGIKIGGTNAEVMPAQWEFQIGPCEGIDMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGL-KYIEEAIEKLSKRHQYHIRAYDPKGGLDNTRRLTGFH-ETSNI--NDFSAGVANRGASIRIPRTGGQEKKGYFEDRRPSAN 345          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA_MACFA (Glutamine synthetase OS=Macaca fascicularis GN=GLUL PE=2 SV=3)

HSP 1 Score: 174.481 bits (441), Expect = 4.824e-43
Identity = 104/240 (43.33%), Postives = 135/240 (56.25%), Query Frame = 2
Query:    2 RHAAAKIFSHSDVVAEE-PWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGF*GY*ESN*ETWTEAQ*AHCRIW--------*RQ*TPTHWQT*NS*HQHFQWGCC*PWGINPCWTRHRERRKGYFEDRRPAFN 694
            RH   +I    D+V+ + PW+G+EQEYTL+  D   P                    AD+A+GRDIV++HY+ACLYAG+ I+G N EVMP QWEFQ+GP  GIS GD LWVAR+IL R+ E  GV+ +FDPKPI G+WNGAG H N+STK+MR + G   Y E   E  ++    H R +         R+ T  H +T N     F  G               + +KGYFEDRRP+ N
Sbjct:  115 RHTCKRIM---DMVSNQHPWFGMEQEYTLMGTDGH-PFGWPSNGFPGPQGPYYCGVGADRAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGL-KYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFH-ETSNI--NDFSAGVANRSASIRIPRTVGQEKKGYFEDRRPSAN 346          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA_HUMAN (Glutamine synthetase OS=Homo sapiens GN=GLUL PE=1 SV=4)

HSP 1 Score: 174.481 bits (441), Expect = 4.824e-43
Identity = 104/240 (43.33%), Postives = 135/240 (56.25%), Query Frame = 2
Query:    2 RHAAAKIFSHSDVVAEE-PWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGF*GY*ESN*ETWTEAQ*AHCRIW--------*RQ*TPTHWQT*NS*HQHFQWGCC*PWGINPCWTRHRERRKGYFEDRRPAFN 694
            RH   +I    D+V+ + PW+G+EQEYTL+  D   P                    AD+A+GRDIV++HY+ACLYAG+ I+G N EVMP QWEFQ+GP  GIS GD LWVAR+IL R+ E  GV+ +FDPKPI G+WNGAG H N+STK+MR + G   Y E   E  ++    H R +         R+ T  H +T N     F  G               + +KGYFEDRRP+ N
Sbjct:  114 RHTCKRIM---DMVSNQHPWFGMEQEYTLMGTDGH-PFGWPSNGFPGPQGPYYCGVGADRAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGL-KYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFH-ETSNI--NDFSAGVANRSASIRIPRTVGQEKKGYFEDRRPSAN 345          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA_BOVIN (Glutamine synthetase OS=Bos taurus GN=GLUL PE=2 SV=4)

HSP 1 Score: 174.481 bits (441), Expect = 4.824e-43
Identity = 105/240 (43.75%), Postives = 133/240 (55.42%), Query Frame = 2
Query:    2 RHAAAKIFSHSDVVAEE-PWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGF*GY*ESN*ETWTEAQ*AHCRIW--------*RQ*TPTHWQT*NS*HQHFQWGCC*PWGINPCWTRHRERRKGYFEDRRPAFN 694
            RH   +I    D+V+ + PW+G+EQEYTL+  D   P                    ADKA+GRDIV++HY+ACLYAGI I G N EVMP QWEFQ+GP  GI  GD LWVAR+IL R+ E  GV+ +FDPKPI G+WNGAG H N+STK+MR + G   Y E   E  ++    H R +         R+ T  H +T N     F  G               + +KGYFEDRRP+ N
Sbjct:  114 RHTCKRIM---DMVSNQRPWFGMEQEYTLMGTDGH-PFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGIKIGGTNAEVMPAQWEFQIGPCEGIDMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGL-KYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFH-ETSNI--NDFSAGVANRGASIRIPRTVGQEKKGYFEDRRPSAN 345          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA_ACOCA (Glutamine synthetase OS=Acomys cahirinus GN=GLUL PE=2 SV=3)

HSP 1 Score: 172.17 bits (435), Expect = 2.394e-42
Identity = 102/240 (42.50%), Postives = 135/240 (56.25%), Query Frame = 2
Query:    2 RHAAAKIFSHSDVVAEE-PWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGF*GY*ESN*ETWTEAQ*AHCRIW--------*RQ*TPTHWQT*NS*HQHFQWGCC*PWGINPCWTRHRERRKGYFEDRRPAFN 694
            RH+  +I    D+V+ + PW+G+EQEYTL+  D   P                    ADKA+GRDIV++HY+ACLYAG+ I+G N EVMP QWEFQ+GP  GI  GD LWVAR+IL R+ E  GV+ +FDPKPI G+WNGAG H N+STK+MR + G   Y E   +  ++    H R +         R+ T  H +T N     F  G               + ++GYFEDRRP+ N
Sbjct:  114 RHSCKRIM---DMVSNQHPWFGMEQEYTLMGTDGH-PFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGL-KYIEEAIDKLSKRHQYHIRAYDPKGGLDNARRLTGFH-ETSNI--NDFSAGVANRGASIRIPRTVGQEKRGYFEDRRPSAN 345          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA_EMENI (Glutamine synthetase OS=Emericella nidulans GN=glnA PE=3 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 4.515e-41
Identity = 101/235 (42.98%), Postives = 127/235 (54.04%), Query Frame = 2
Query:    2 RHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGF*GY*ESN*ETWTEAQ*AHCRIW----*RQ*TPTHWQT*NS*HQHFQWGCC*PWGINPCWTRHRERRKGYFEDRRPAFN 694
            RH  A++        EE W+G+EQEYTLL  D  WP                      K + RDIV++HY+ACLYAG+ ISGIN EVMP QWE+QVGP  GI  GD LW++R++L R+ E  GV +SFDPKPI+GDWNGAG H N ST S R +GG     ES  +        H  ++      + T  H +T N     F +G     G      +  +  KGYFEDRRPA N
Sbjct:   99 RHDCARLMETH--AKEEFWFGLEQEYTLLGPD-GWPYGWPKGGFPGAQGPYYCGVGTGKVYCRDIVEAHYRACLYAGVKISGINAEVMPSQWEYQVGPCHGIEMGDHLWISRFLLHRVAEEFGVKISFDPKPIKGDWNGAGLHTNVSTTSTRAEGGIKAI-ESYMKKLEARHVEHIAVYGEGNEERLTGRH-ETGNI--DKFSYGVADRGGSIRIPRQVAKDGKGYFEDRRPASN 326          
The following BLAST results are available for this feature:
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
GLNA_CAEEL6.635e-4648.10Probable glutamine synthetase OS=Caenorhabditis el... [more]
GLNA2_STRVR6.652e-4551.45Glutamine synthetase 2 OS=Streptomyces viridochrom... [more]
GLNA_SQUAC2.558e-4443.70Glutamine synthetase, mitochondrial OS=Squalus aca... [more]
GLNA_CANFA1.658e-4343.75Glutamine synthetase OS=Canis familiaris GN=GLUL P... [more]
GLNA_PIG3.694e-4343.75Glutamine synthetase OS=Sus scrofa GN=GLUL PE=2 SV... [more]
GLNA_MACFA4.824e-4343.33Glutamine synthetase OS=Macaca fascicularis GN=GLU... [more]
GLNA_HUMAN4.824e-4343.33Glutamine synthetase OS=Homo sapiens GN=GLUL PE=1 ... [more]
GLNA_BOVIN4.824e-4343.75Glutamine synthetase OS=Bos taurus GN=GLUL PE=2 SV... [more]
GLNA_ACOCA2.394e-4242.50Glutamine synthetase OS=Acomys cahirinus GN=GLUL P... [more]
GLNA_EMENI4.515e-4142.98Glutamine synthetase OS=Emericella nidulans GN=gln... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00616 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00616 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623525 ID=BQ623525; Name=BQ623525; organism=Citrus sinensis; type=EST; length=695bp
AAGACATGCAGCTGCCAAGATTTTCAGCCATTCTGACGTTGTGGCTGAAG
AACCATGGTATGGTATTGAGCAGGAATACACCTTACTGCAGAAGGATGTT
AAATGGCCTCTTGGCTGGCCCATCGGTGGTTATCCTGGGCCTCAGGGACC
ATACTACTGTGGTGTTGGTGCTGACAAAGCTTGGGGGCGCGACATTGTAG
ACTCCCATTACAAGGCCTGTCTATATGCAGGAATCAACATCAGTGGCATC
AATGGAGAAGTCATGCCGGGGCAGTGGGAGTTCCAAGTTGGTCCCGCTGT
TGGAATTTCTGCTGGAGATCAGTTGTGGGTTGCCCGCTATATTTTAGAGA
GGATTACAGAGATTGCTGGAGTTGTGCTTTCTTTCGATCCCAAGCCAATT
CAGGGTGACTGGAATGGAGCTGGTGCTCACGCAAATTACAGCACCAAGTC
GATGAGGAACGATGGAGGCTTTTGAGGGTATTAAGAAAGCAATTGAGAAA
CTTGGACTGAGGCACAGTGAGCACATTGCCGCATATGGTGAAGGCAATGA
ACGCCGACTCACTGGCAAACATGAAACAGCTGACATCAACACTTTCAATG
GGGGTGTTGCTAACCGTGGGGCATCAATCCGTGTTGGACCAGACACAGAG
AAAGAAGGAAGGGGTACTTTGAGGACAGGAGACCTGCTTTTAACA
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