BQ623531

Overview
NameBQ623531
Unique NameBQ623531
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL82_ORYSJ (Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 3.385e-37
Identity = 60/97 (61.86%), Postives = 71/97 (73.20%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            DPSPLQD CVA  +  + V VNG  CK+P  A A DFF +  LDKP +T N++G +VT  NV Q+PGLNTLGIS  R+D+AP G NPPHTHPRATEI
Sbjct:   26 DPSPLQDFCVA--DLNSPVRVNGFVCKNPMNASADDFFKAAMLDKPRDTNNKVGSNVTLVNVLQLPGLNTLGISIARLDFAPLGLNPPHTHPRATEI 120          

HSP 2 Score: 58.9214 bits (141), Expect = 3.385e-37
Identity = 40/84 (47.62%), Postives = 46/84 (54.76%), Query Frame = 1
Query:  436 VLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTN-AVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            VLEGTLYVGF    P       K   +G  F   +       +      AVAIAALSSQ PGVITIAN  FG+NPPI+ D L +
Sbjct:  123 VLEGTLYVGFVTSNPDN-RLLSKVLNKGDVFVFPEGLIHFQFNPNPHKPAVAIAALSSQNPGVITIANAVFGSNPPISDDILMK 205          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL812_ORYSJ (Germin-like protein 8-12 OS=Oryza sativa subsp. japonica GN=Os08g0231400 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.657e-36
Identity = 63/121 (52.07%), Postives = 75/121 (61.98%), Query Frame = 3
Query:   69 MKTSVQFLKGFXXXXXXXXXXXXFDPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            M +S  FL G             +DPSPLQD CVA  +  + V VNG  CK+P    ++DFF +   D P NT N+LG +VTN NV + PGLNTLGIS  RIDYAP G NPPH HPRATE+
Sbjct:    1 MASSSLFLLGALLVLASWQAIVAYDPSPLQDFCVA--DMNSPVRVNGFACKNPMDVSSEDFFNAAKFDMPRNTFNKLGSNVTNLNVMEFPGLNTLGISLARIDYAPMGVNPPHIHPRATEL 119          

HSP 2 Score: 55.0694 bits (131), Expect = 3.657e-36
Identity = 37/85 (43.53%), Postives = 47/85 (55.29%), Query Frame = 1
Query:  430 LVVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            L VLEGTLYVGF    P +  +          F  +  H  + +   K  AVA +ALSSQ PGVITIA+  FG+ PPI+ D L +
Sbjct:  120 LTVLEGTLYVGFVTSNPNKLFSKVVCKGDVFVFPKAMIHFQMNLDHDKP-AVAQSALSSQNPGVITIASAVFGSQPPISDDVLTK 203          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL89_ORYSJ (Germin-like protein 8-9 OS=Oryza sativa subsp. japonica GN=Os08g0189850 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.657e-36
Identity = 62/97 (63.92%), Postives = 68/97 (70.10%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            DPSPLQD CVA  +  + V VNG  C DPK   A  FF +  LD P  T N++G +VT  NV QIPGLNTLGIS  RIDYAP GQNPPHTHPRATEI
Sbjct:   24 DPSPLQDFCVA--DKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKT-NKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEI 117          

HSP 2 Score: 57.3806 bits (137), Expect = 3.657e-36
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 2
Query:  464 FVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQF 562
            FVTSN  NNTL +KVLNKGDVFVFP+G+IHFQF
Sbjct:  129 FVTSNP-NNTLFSKVLNKGDVFVFPVGLIHFQF 160          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL87_ORYSJ (Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 4.762e-36
Identity = 61/97 (62.89%), Postives = 68/97 (70.10%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            DPSPLQD CVA  +  + V VNG  C DPK   A  FF +  LD P  T N++G +VT  NV QIPGLNTLGIS  RIDYAP G+NPPHTHPRATEI
Sbjct:   25 DPSPLQDFCVA--DKHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKT-NKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEI 118          

HSP 2 Score: 57.7658 bits (138), Expect = 4.762e-36
Identity = 39/86 (45.35%), Postives = 46/86 (53.49%), Query Frame = 1
Query:  430 LVVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTN-AVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            L VLEGTLYVGF    P       K   +G  F   +       +      AVA+AALSSQ PG ITIAN  FG+ PPI+ D LA+
Sbjct:  119 LTVLEGTLYVGFVTSNPNN-TLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVALAALSSQNPGAITIANAVFGSKPPISDDILAK 203          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL121_ORYSJ (Germin-like protein 12-1 OS=Oryza sativa subsp. japonica GN=Os12g0154700 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.052e-35
Identity = 61/99 (61.62%), Postives = 70/99 (70.71%), Query Frame = 3
Query:  138 FDPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFL-SGLDKPGNTA-NRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            FDPSPLQD CVA  +  + V VNG  CKD K     DFFL + LDKP +T  ++ G +VT  NV ++ GLNTLGIS  RIDYAP GQNPPHTHPRATEI
Sbjct:   23 FDPSPLQDFCVA--DRNSPVRVNGFPCKDAKDVNVDDFFLEANLDKPMDTTKSKAGSNVTLINVMKLTGLNTLGISMARIDYAPKGQNPPHTHPRATEI 119          

HSP 2 Score: 59.3066 bits (142), Expect = 1.052e-35
Identity = 43/89 (48.31%), Postives = 48/89 (53.93%), Query Frame = 1
Query:  430 LVVLEGTLYVGFCDIKPA--E*HTHCKSSEQGRCFCVSDW--HDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            L V EGTLYVGF     A  E     K+  +G  F       H        K  AVAIAALSSQ PG ITIAN  FG+NPPI+ D LA+
Sbjct:  120 LTVFEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKP-AVAIAALSSQNPGAITIANAVFGSNPPISDDVLAK 207          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL86_ORYSJ (Germin-like protein 8-6 OS=Oryza sativa subsp. japonica GN=Os08g0189500 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.327e-35
Identity = 62/97 (63.92%), Postives = 68/97 (70.10%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            DPSPLQD CVA  +  + V VNG  C DPK   A  FF +  LD P  T N++G +VT  NV QIPGLNTLGIS  RIDYAP GQNPPHTHPRATEI
Sbjct:   25 DPSPLQDFCVA--DEHSPVLVNGFACLDPKHVNADHFFKAAMLDTPRKT-NKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEI 118          

HSP 2 Score: 55.0694 bits (131), Expect = 2.327e-35
Identity = 39/86 (45.35%), Postives = 46/86 (53.49%), Query Frame = 1
Query:  430 LVVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTN-AVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            L VLEGTLYVGF    P       K  ++G  F           +      AVAIAALSSQ PG ITIAN  FG+ PPI+ + LA+
Sbjct:  119 LTVLEGTLYVGFVTSNPNN-TLFSKVLKKGDVFVFPVGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDEVLAK 203          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL81_ORYSJ (Putative germin-like protein 8-1 OS=Oryza sativa subsp. japonica GN=Os08g0188900 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.328e-35
Identity = 61/98 (62.24%), Postives = 73/98 (74.49%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSG-LDKPGNTA-NRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            +PSPLQD CVA  +  +AV VNG  CK+P    A DFF +  LDKP +TA N++G ++T  NV +IPGLNTLGIS VR+DYAP G NPPHTHPRATEI
Sbjct:   25 EPSPLQDFCVA--DLNSAVRVNGFACKNPTNVSADDFFKAAMLDKPRDTAVNKVGSNITLINVMEIPGLNTLGISIVRVDYAPLGLNPPHTHPRATEI 120          

HSP 2 Score: 53.9138 bits (128), Expect = 2.328e-35
Identity = 35/84 (41.67%), Postives = 45/84 (53.57%), Query Frame = 1
Query:  436 VLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTN-AVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            VLEGTLYVGF    P       K   +G  F           ++     A+A +A+SSQ PG+ITIAN  F +NPPI+ D LA+
Sbjct:  123 VLEGTLYVGFVTSNPDN-KLFSKVLNKGDVFVFPKGLIHFQFNLDPHKPAIATSAISSQNPGIITIANAVFRSNPPISDDILAK 205          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL88_ORYSJ (Germin-like protein 8-8 OS=Oryza sativa subsp. japonica GN=Os08g0189700 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 3.031e-35
Identity = 61/97 (62.89%), Postives = 68/97 (70.10%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            DPSPLQD CVA  +  + V VNG  C DPK   A  FF +  LD P  T N++G +VT  NV QIPGLNTLGIS  RIDYAP G+NPPHTHPRATEI
Sbjct:   24 DPSPLQDFCVA--DKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKT-NKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEI 117          

HSP 2 Score: 55.4546 bits (132), Expect = 3.031e-35
Identity = 39/86 (45.35%), Postives = 45/86 (52.33%), Query Frame = 1
Query:  430 LVVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTN-AVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            L VLEGTLYVGF    P       K   +G  F   +       +      AVAIAALSSQ PG ITIAN  FG+ PPI+   LA+
Sbjct:  118 LTVLEGTLYVGFVTSNPNN-TLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDKVLAK 202          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL811_ORYSJ (Germin-like protein 8-11 OS=Oryza sativa subsp. japonica GN=Os08g0190100 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.031e-35
Identity = 61/97 (62.89%), Postives = 68/97 (70.10%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            DPSPLQD CVA  +  + V VNG  C +PK   A  FF +  LD P  T N++G +VT  NV QIPGLNTLGIS  RIDYAP GQNPPHTHPRATEI
Sbjct:   24 DPSPLQDFCVA--DMHSPVLVNGFACLNPKDVNADHFFKAAMLDTPRKT-NKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEI 117          

HSP 2 Score: 57.3806 bits (137), Expect = 3.031e-35
Identity = 43/87 (49.43%), Postives = 48/87 (55.17%), Query Frame = 1
Query:  430 LVVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFC--VSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            L VLEGTLYVGF    P       K   +G  F   V   H     +  K  AVAIAALSSQ PG ITIAN  FG+ PPI+ D LA+
Sbjct:  118 LTVLEGTLYVGFVTSNPDN-KFFSKVLNKGDVFVFPVGLIHFQFNPNPYKP-AVAIAALSSQNPGAITIANAVFGSKPPISDDVLAK 202          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL810_ORYSJ (Germin-like protein 8-10 OS=Oryza sativa subsp. japonica GN=GLP2 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 3.949e-35
Identity = 61/97 (62.89%), Postives = 68/97 (70.10%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            DPSPLQD CVA  +  + V VNG  C DPK   A  FF +  LD P  T N++G +VT  NV QIPGLNTLGIS  RIDYAP G+NPPHTHPRATEI
Sbjct:   24 DPSPLQDFCVA--DMHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKT-NKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEI 117          

HSP 2 Score: 55.0694 bits (131), Expect = 3.949e-35
Identity = 27/33 (81.82%), Postives = 29/33 (87.88%), Query Frame = 2
Query:  464 FVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQF 562
            FVTSN  NNTL +KVLNKGDVFVFP G+IHFQF
Sbjct:  129 FVTSNP-NNTLFSKVLNKGDVFVFPEGLIHFQF 160          
The following BLAST results are available for this feature:
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
GL82_ORYSJ3.385e-3761.86Germin-like protein 8-2 OS=Oryza sativa subsp. jap... [more]
GL812_ORYSJ3.657e-3652.07Germin-like protein 8-12 OS=Oryza sativa subsp. ja... [more]
GL89_ORYSJ3.657e-3663.92Germin-like protein 8-9 OS=Oryza sativa subsp. jap... [more]
GL87_ORYSJ4.762e-3662.89Germin-like protein 8-7 OS=Oryza sativa subsp. jap... [more]
GL121_ORYSJ1.052e-3561.62Germin-like protein 12-1 OS=Oryza sativa subsp. ja... [more]
GL86_ORYSJ2.327e-3563.92Germin-like protein 8-6 OS=Oryza sativa subsp. jap... [more]
GL81_ORYSJ2.328e-3562.24Putative germin-like protein 8-1 OS=Oryza sativa s... [more]
GL88_ORYSJ3.031e-3562.89Germin-like protein 8-8 OS=Oryza sativa subsp. jap... [more]
GL811_ORYSJ3.031e-3562.89Germin-like protein 8-11 OS=Oryza sativa subsp. ja... [more]
GL810_ORYSJ3.949e-3562.89Germin-like protein 8-10 OS=Oryza sativa subsp. ja... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00622 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00622 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623531 ID=BQ623531; Name=BQ623531; organism=Citrus sinensis; type=EST; length=693bp
AATAAGTTCAGAAATTGATTAAACAGAGTGAGATCCTACAGCTAGCTAGC
TAGCTAATTAAACACACAATGAAAACCAGTGTTCAATTTCTTAAAGGTTT
TGCTCTCTTGGTTTTAGCTTCTTCGTTGGCCTCTGCCTTTGATCCTAGTC
CTCTTCAGGATATCTGTGTAGCCATCGATGAGCCCAAGAACGCAGTTTTT
GTTAACGGGAAGTTCTGCAAGGACCCCAAGCTTGCTAAAGCTCAAGATTT
CTTCTTATCAGGGCTAGACAAGCCTGGAAACACAGCAAACCGTCTTGGTT
TTAGTGTGACAAATGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTT
GGCATATCAGCAGTCCGTATTGACTATGCACCATACGGCCAAAACCCACC
TCACACGCACCCTCGTGCCACTGAGATCCCTGGTGGTCCTGGAGGGAACA
CTTTATGTTGGTTTTTGTGACATCAAACCAGCTGAATAACACACTCATTG
CAAAAGTTCTGAACAAGGGAGATGTTTTTGTGTTTCCGATTGGCATGATT
CACTTCCAATTCACATCGGAAAAACAAATGCAGTTGCAATTGCTGCTCTA
AGCAGCCAGTTCCCTGGTGTCATTACCATAGCAAACACGGGCTTCGGAGC
CAATCCTCCGATCAATCCTGATTTTCTTGCCAGGCGTCCAGTT
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