BQ623531

Overview
NameBQ623531
Unique NameBQ623531
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL122_ORYSJ (Germin-like protein 12-2 OS=Oryza sativa subsp. japonica GN=Os12g0154800 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 8.722e-35
Identity = 60/98 (61.22%), Postives = 69/98 (70.41%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSG-LDKPGNTA-NRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            DPSPLQD CVA  +  + V VNG  CKD K     DFFL+  LDKP +T  ++ G +VT  NV ++ GLNTLGIS  RIDYAP GQNPPHTHPRATEI
Sbjct:   24 DPSPLQDFCVA--DRNSPVHVNGFPCKDAKDVNVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEI 119          

HSP 2 Score: 57.7658 bits (138), Expect = 8.722e-35
Identity = 43/89 (48.31%), Postives = 48/89 (53.93%), Query Frame = 1
Query:  430 LVVLEGTLYVGFCDIKPA--E*HTHCKSSEQGRCFCVSDW--HDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            L VLEGTLYVGF     A  E     K+  +G  F       H        K  AVAIAALSSQ PG ITIAN  FG+N PI+ D LA+
Sbjct:  120 LTVLEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKP-AVAIAALSSQNPGAITIANAVFGSNSPISDDVLAK 207          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL83_ORYSJ (Germin-like protein 8-3 OS=Oryza sativa subsp. japonica GN=GER2 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 8.724e-35
Identity = 58/98 (59.18%), Postives = 67/98 (68.37%), Query Frame = 3
Query:  138 FDPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            FDPSPLQD CVA  +  + V VNG  CK+P    + DFF +   D P NT N++G +VTN NV   PGLNTLGIS  RIDYAP G NPPH HPRATE+
Sbjct:   24 FDPSPLQDFCVA--DMASPVRVNGFPCKNPMNVTSDDFFNAAKFDMPRNTMNKVGSNVTNLNVINFPGLNTLGISLARIDYAPMGVNPPHVHPRATEL 119          

HSP 2 Score: 54.6842 bits (130), Expect = 8.724e-35
Identity = 37/85 (43.53%), Postives = 46/85 (54.12%), Query Frame = 1
Query:  430 LVVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            L VLEGTLYVGF    P    +          F  +  H  + +   K  AVA +ALSSQ PGVITIA+  FG+ PPI+ D L +
Sbjct:  120 LTVLEGTLYVGFVTSNPNRLFSKVVHKGDVFVFPKAMIHFQMNLDHNKP-AVAQSALSSQNPGVITIASAIFGSTPPISDDVLVK 203          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL18_ARATH (Germin-like protein subfamily 1 member 8 OS=Arabidopsis thaliana GN=GLP9 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.068e-34
Identity = 69/109 (63.30%), Postives = 80/109 (73.39%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEIPGGPGGNTLCWFL 467
            DPSPLQD CV ++ P + VFVNGKFCKDP++  A DFF S L++PGNT N +G +VT  NV  + GLNTLGIS VRIDYAP GQNPPHTHPRATEI     G  L  F+
Sbjct:   26 DPSPLQDFCVGVNTPADGVFVNGKFCKDPRIVFADDFFFSSLNRPGNTNNAVGSNVTTVNVNNLGGLNTLGISLVRIDYAPNGQNPPHTHPRATEILVVQQGTLLVGFI 134          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL84_ORYSJ (Germin-like protein 8-4 OS=Oryza sativa subsp. japonica GN=GER1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.928e-34
Identity = 58/98 (59.18%), Postives = 68/98 (69.39%), Query Frame = 3
Query:  138 FDPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            FDPSPLQD CVA  + K+ V VNG  CK+P    + DFF +   D P +T N++G +VTN NV   PGLNTLGIS  RIDYAP G NPPH HPRATE+
Sbjct:   24 FDPSPLQDFCVA--DMKSPVRVNGFPCKNPMEVNSDDFFNAAKFDMPRSTMNKVGSNVTNLNVLNFPGLNTLGISLARIDYAPLGVNPPHIHPRATEL 119          

HSP 2 Score: 53.1434 bits (126), Expect = 1.928e-34
Identity = 35/85 (41.18%), Postives = 46/85 (54.12%), Query Frame = 1
Query:  430 LVVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            L VLEGTLYVGF    P    +          F  +  H  + +   K  AVA ++L+SQ PGVITIA+  FG+ PPI+ D L +
Sbjct:  120 LTVLEGTLYVGFVTSNPNRLFSKVVHKGDTFVFPKAMIHFQMNLDHNKP-AVAQSSLNSQNPGVITIASAVFGSKPPISDDVLTK 203          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL123_ORYSJ (Putative germin-like protein 12-3 OS=Oryza sativa subsp. japonica GN=Os12g0154900 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 4.259e-34
Identity = 60/98 (61.22%), Postives = 70/98 (71.43%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSG-LDKPGN-TANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            DPSPLQD+CVA  +  + V VNG  CKD K     DFFL+  LDKP + T ++ G +VT  NV ++ GLNTLGIS  RIDYAP GQNPPHTHPRATEI
Sbjct:   24 DPSPLQDLCVA--DKNSPVRVNGFPCKDAKDVSVDDFFLAANLDKPMDITKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEI 119          

HSP 2 Score: 55.4546 bits (132), Expect = 4.259e-34
Identity = 40/89 (44.94%), Postives = 48/89 (53.93%), Query Frame = 1
Query:  430 LVVLEGTLYVGFCDIKPA--E*HTHCKSSEQGRCFCVSDW--HDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            L V+EG+LYVGF     A  E     K+  +G  F   +   H        K  A AI ALSSQ PG ITIAN  FG+NPPI+ D LA+
Sbjct:  120 LSVIEGSLYVGFVTSNQANGENKLFTKTLNKGDVFVFPEGLIHFQFNPSYDKP-AAAIVALSSQNPGAITIANAVFGSNPPISDDVLAK 207          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL124_ORYSJ (Putative germin-like protein 12-4 OS=Oryza sativa subsp. japonica GN=Os12g0155000 PE=3 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 7.226e-34
Identity = 59/98 (60.20%), Postives = 68/98 (69.39%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSG-LDKPGNTA-NRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            DPSPLQD CVA  +  + V VNG  CKD K     DFFL+  LDKP +T  ++ G +VT  NV ++ GLNTL IS  RIDYAP GQNPPHTHPRATEI
Sbjct:   24 DPSPLQDFCVA--DKHSPVRVNGLPCKDAKDVSVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLSISMARIDYAPKGQNPPHTHPRATEI 119          

HSP 2 Score: 57.3806 bits (137), Expect = 7.226e-34
Identity = 42/89 (47.19%), Postives = 49/89 (55.06%), Query Frame = 1
Query:  430 LVVLEGTLYVGFCDIKPA--E*HTHCKSSEQGRCFCVSDW--HDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            L VLEG+LYVGF     A  E     K+  +G  F       H        K  AVAIAALSSQ PG ITIAN  FG++PPI+ D LA+
Sbjct:  120 LTVLEGSLYVGFVTSNQANRENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKP-AVAIAALSSQNPGAITIANAVFGSHPPISDDVLAK 207          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL85_ORYSJ (Germin-like protein 8-5 OS=Oryza sativa subsp. japonica GN=Os08g0189400 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.229e-34
Identity = 60/97 (61.86%), Postives = 67/97 (69.07%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            DPSPLQD CVA  +  + V VNG  C +P    A  FF +  LD P  T N++G +VT  NV QIPGLNTLGIS  RIDYAP GQNPPHTHPRATEI
Sbjct:   24 DPSPLQDFCVA--DMHSPVRVNGFACLNPMEVNADHFFKAAKLDTPRKT-NKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEI 117          

HSP 2 Score: 55.8398 bits (133), Expect = 7.229e-34
Identity = 39/86 (45.35%), Postives = 45/86 (52.33%), Query Frame = 1
Query:  430 LVVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTN-AVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            L VLEGTLYVGF    P       K   +G  F           +      AVAIAALSSQ PG ITIAN  FG+ PPI+ + LA+
Sbjct:  118 LTVLEGTLYVGFVTSNPNN-TLFSKVLNKGDVFVFPQGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDEVLAK 202          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL14_ARATH (Germin-like protein subfamily 1 member 4 OS=Arabidopsis thaliana GN=At3g04180 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.597e-33
Identity = 55/97 (56.70%), Postives = 69/97 (71.13%), Query Frame = 3
Query:  138 FDPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            +DPSPLQD CVA +E  N V+VNG+FCKDPK     DF+ SGL+ PGNT    G   T  +VE++PGLNTLG+   R D+AP G +PPHTHPR ++I
Sbjct:   25 YDPSPLQDYCVATNET-NGVYVNGEFCKDPKRVTTNDFYTSGLNVPGNTIIGPGARNTVVDVERLPGLNTLGVDIARYDFAPGGLDPPHTHPRGSQI 120          

HSP 2 Score: 45.8246 bits (107), Expect = 1.597e-33
Identity = 21/31 (67.74%), Postives = 24/31 (77.42%), Query Frame = 2
Query:  464 FVTSNQLNNTLIAKVLNKGDVFVFPIGMIHF 556
            FV+SN+ N TL  KVL  GDVFVFP G+IHF
Sbjct:  132 FVSSNEYNYTLFTKVLYPGDVFVFPKGLIHF 162          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL32_ORYSJ (Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica GN=Os03g0651800 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.856e-31
Identity = 53/97 (54.64%), Postives = 66/97 (68.04%), Query Frame = 3
Query:  141 DPSPLQDICVA-IDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            DP  LQD+CVA     +  + +NG  CK  +   A DFF  GL   GNT N +G  VT A+VE++PGLNT+G+S  RIDYAP+G +PPHTHPRATEI
Sbjct:   24 DPDMLQDVCVADYKSLRGPLRLNGIPCKRLENVTANDFFFDGLTNAGNTTNAVGSLVTAASVERLPGLNTMGVSMARIDYAPWGLSPPHTHPRATEI 120          

HSP 2 Score: 48.9062 bits (115), Expect = 1.856e-31
Identity = 33/85 (38.82%), Postives = 44/85 (51.76%), Query Frame = 1
Query:  430 LVVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            + V EGTL VGF            ++  +G  F           + G T+A+AIAA +SQ PG  +IA+T FGA PP+  D LAR
Sbjct:  121 MFVAEGTLDVGFVTTANK---LFTRTVSKGEVFVFPRGLVHFQRNSGNTSALAIAAFNSQLPGTQSIADTLFGAAPPLPSDTLAR 202          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL13_ORYSJ (Germin-like protein 1-3 OS=Oryza sativa subsp. japonica GN=GER8 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.098e-31
Identity = 56/97 (57.73%), Postives = 66/97 (68.04%), Query Frame = 3
Query:  141 DPSPLQDICVA-IDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            DP  LQD+CVA     K  + +NG  CK  +   A DFF  GL K GNT N +G  VT A+VE +PGLNT+G+S  RIDYAP+G NPPHTHPRATEI
Sbjct:   24 DPDMLQDVCVADYKSLKGPLRLNGFPCKRIENVTANDFFFDGLMKAGNTGNAVGSVVTAASVESLPGLNTMGVSMARIDYAPWGLNPPHTHPRATEI 120          

HSP 2 Score: 43.8986 bits (102), Expect = 4.098e-31
Identity = 35/86 (40.70%), Postives = 42/86 (48.84%), Query Frame = 1
Query:  430 LVVLEGTLYVGFCDI-KPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            + V+EG+L VGF          T CK    G  F           + G T A AIAAL+SQ PG  +IA   FGA PP+  D LAR
Sbjct:  121 IFVVEGSLDVGFVTTANKLFTRTVCK----GEVFVFPRGLVHFQKNNGNTPAFAIAALNSQLPGTQSIAAALFGAAPPLPSDTLAR 202          
The following BLAST results are available for this feature:
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
GL122_ORYSJ8.722e-3561.22Germin-like protein 12-2 OS=Oryza sativa subsp. ja... [more]
GL83_ORYSJ8.724e-3559.18Germin-like protein 8-3 OS=Oryza sativa subsp. jap... [more]
GL18_ARATH1.068e-3463.30Germin-like protein subfamily 1 member 8 OS=Arabid... [more]
GL84_ORYSJ1.928e-3459.18Germin-like protein 8-4 OS=Oryza sativa subsp. jap... [more]
GL123_ORYSJ4.259e-3461.22Putative germin-like protein 12-3 OS=Oryza sativa ... [more]
GL124_ORYSJ7.226e-3460.20Putative germin-like protein 12-4 OS=Oryza sativa ... [more]
GL85_ORYSJ7.229e-3461.86Germin-like protein 8-5 OS=Oryza sativa subsp. jap... [more]
GL14_ARATH1.597e-3356.70Germin-like protein subfamily 1 member 4 OS=Arabid... [more]
GL32_ORYSJ1.856e-3154.64Putative germin-like protein 3-2 OS=Oryza sativa s... [more]
GL13_ORYSJ4.098e-3157.73Germin-like protein 1-3 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00622 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00622 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623531 ID=BQ623531; Name=BQ623531; organism=Citrus sinensis; type=EST; length=693bp
AATAAGTTCAGAAATTGATTAAACAGAGTGAGATCCTACAGCTAGCTAGC
TAGCTAATTAAACACACAATGAAAACCAGTGTTCAATTTCTTAAAGGTTT
TGCTCTCTTGGTTTTAGCTTCTTCGTTGGCCTCTGCCTTTGATCCTAGTC
CTCTTCAGGATATCTGTGTAGCCATCGATGAGCCCAAGAACGCAGTTTTT
GTTAACGGGAAGTTCTGCAAGGACCCCAAGCTTGCTAAAGCTCAAGATTT
CTTCTTATCAGGGCTAGACAAGCCTGGAAACACAGCAAACCGTCTTGGTT
TTAGTGTGACAAATGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTT
GGCATATCAGCAGTCCGTATTGACTATGCACCATACGGCCAAAACCCACC
TCACACGCACCCTCGTGCCACTGAGATCCCTGGTGGTCCTGGAGGGAACA
CTTTATGTTGGTTTTTGTGACATCAAACCAGCTGAATAACACACTCATTG
CAAAAGTTCTGAACAAGGGAGATGTTTTTGTGTTTCCGATTGGCATGATT
CACTTCCAATTCACATCGGAAAAACAAATGCAGTTGCAATTGCTGCTCTA
AGCAGCCAGTTCCCTGGTGTCATTACCATAGCAAACACGGGCTTCGGAGC
CAATCCTCCGATCAATCCTGATTTTCTTGCCAGGCGTCCAGTT
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