BQ623619

Overview
NameBQ623619
Unique NameBQ623619
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length567
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CDC31_SCHPO (Cell division control protein 31 OS=Schizosaccharomyces pombe GN=cdc31 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 9.439e-27
Identity = 58/154 (37.66%), Postives = 90/154 (58.44%), Query Frame = 2
Query:   20 KTNGRRKMADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 481
            +  G   +  ++T++Q  +  EAF LFD D D  I   EL   MR+LG N  ++E+  ++ + D  G G +   +F+ +M  K+ + D  EE+K AF +FD D+ G IS   LR V   L E + D+E++ MI E D+D DG+IN +EF+ +MM
Sbjct:   20 RLGGYAPLRVEITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQMEDFVRVMTEKIVERDPLEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEFDLDQDGEINEQEFIAIMM 173          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: MYL9_RAT (Myosin regulatory light polypeptide 9 OS=Rattus norvegicus GN=Myl9 PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.233e-26
Identity = 59/138 (42.75%), Postives = 89/138 (64.49%), Query Frame = 2
Query:   65 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            QI EFKEAF++ D++ DG I  ++L  ++ SLG+NPT+  L+ M+NE      G I+F  FL +   K+  TD E+ ++ AF  FD++ +GFI    LR ++T +G++ TDEEVDEM RE  +D  G  NY EF +++
Sbjct:   30 QIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDEXLEGMMNEAP----GPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYRER-IDKKGNFNYVEFTRIL 162          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: MLR_PHYPO (Myosin regulatory light chain OS=Physarum polycephalum PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.233e-26
Identity = 59/140 (42.14%), Postives = 90/140 (64.29%), Query Frame = 2
Query:   74 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKD-TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAKY 490
            + +E F +FDKD DG ++ +ELG+ +RSLG+NPT AEL  +  +++A      D   F  +  + +K  T+  +E+ +AFR  DK+ NG I  AELR ++ NLG+ LT  EV+E+++E  V GDG INYE FV +++  Y
Sbjct:    6 QIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAK---EFDLATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVTGY 142          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: TNNC_PATYE (Troponin C OS=Patinopecten yessoensis PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.610e-26
Identity = 56/143 (39.16%), Postives = 94/143 (65.73%), Query Frame = 2
Query:   56 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 484
            ++ QI + K+AF   DK  +G ++ K+LG + +SLG    + +++D  +E+D +  G ++   ++ L  RK+K+   E ELKEAFRV DK++ G I    LR ++++LG++LT+EE++ MI E D DG G ++YEEF  +MM+
Sbjct:    7 SEKQILDAKQAFCNVDKKKEGTVSCKDLGAIFKSLGLLVKDDKIKDWSDEMDEEATGRLNCDAWIQLFERKLKEDLDERELKEAFRVLDKEKKGVIKVDVLRWILSSLGDELTEEEIENMIAETDTDGSGTVDYEEFKCLMMS 149          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: MYL3_RAT (Myosin light chain 3 OS=Rattus norvegicus GN=Myl3 PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 1.610e-26
Identity = 68/155 (43.87%), Postives = 101/155 (65.16%), Query Frame = 2
Query:   38 KMADQLTDDQISEFKEAFSLFDKD--GDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD--GNGTIDFPEFLNLMAR--KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 484
            K+  + T +QI EFKEAF LFD+   G+  IT  + G V+R+LGQNPT+AE+  ++ +   +   +  +DF  FL ++    K KDT + E+  E  RVFDK+ NG +  AELRHV+  LGE+LT++EV++++   + D +G INYE FVK +MA
Sbjct:   46 KIKIEFTPEQIEEFKEAFQLFDRTPKGEMKITYGQCGDVLRALGQNPTQAEVLRVLGKPKQEELNSKMMDFETFLPMLQHISKNKDTGTYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGERLTEDEVEKLMAGQE-DSNGCINYEAFVKHIMA 199          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CML15_ARATH (Probable calcium-binding protein CML15 OS=Arabidopsis thaliana GN=CML15 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.610e-26
Identity = 58/142 (40.85%), Postives = 91/142 (64.08%), Query Frame = 2
Query:   59 DDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD--SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            +DQI + K+ F  FD D DG +T  EL  ++RSLG  P+  ++  ++  +D++GNG ++F E +  +   + +    + E+L E F+ FD+D NGFISAAEL   M  +G+ LT +E+ EMI+EAD +GDG I++ EF  +M
Sbjct:    2 EDQIRQLKDIFDRFDMDADGSLTILELAALLRSLGLKPSGDQIHVLLASMDSNGNGFVEFDELVGTILPDLNEEVLINSEQLLEIFKSFDRDGNGFISAAELAGAMAKMGQPLTYKELTEMIKEADTNGDGVISFGEFASIM 143          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: MYL9_BOVIN (Myosin regulatory light polypeptide 9 OS=Bos taurus GN=MYL9 PE=2 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 2.103e-26
Identity = 58/138 (42.03%), Postives = 87/138 (63.04%), Query Frame = 2
Query:   65 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            QI EFKEAF++ D++ DG I  ++L  ++ SLG+NPT+  L  M+NE      G I+F  FL +   K+  TD E+ ++ AF  FD++  G I    LR ++T +G++ TDEEVDE+ REA +D  G  NY EF +++
Sbjct:   30 QIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDEYLDAMMNEAP----GPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRIL 163          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: ML12A_PONAB (Myosin regulatory light chain 12A OS=Pongo abelii GN=MYL12A PE=2 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 2.103e-26
Identity = 58/138 (42.03%), Postives = 87/138 (63.04%), Query Frame = 2
Query:   65 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            QI EFKEAF++ D++ DG I  ++L  ++ SLG+NPT+  L  M+NE      G I+F  FL +   K+  TD E+ ++ AF  FD++  G I    LR ++T +G++ TDEEVDE+ REA +D  G  NY EF +++
Sbjct:   29 QIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDEYLDAMMNEAP----GPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRIL 162          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: ML12A_HUMAN (Myosin regulatory light chain 12A OS=Homo sapiens GN=MYL12A PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.103e-26
Identity = 58/138 (42.03%), Postives = 87/138 (63.04%), Query Frame = 2
Query:   65 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            QI EFKEAF++ D++ DG I  ++L  ++ SLG+NPT+  L  M+NE      G I+F  FL +   K+  TD E+ ++ AF  FD++  G I    LR ++T +G++ TDEEVDE+ REA +D  G  NY EF +++
Sbjct:   29 QIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDEYLDAMMNEAP----GPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRIL 162          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: TNNC_TODPA (Troponin C OS=Todarodes pacificus PE=1 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 2.746e-26
Identity = 53/143 (37.06%), Postives = 91/143 (63.64%), Query Frame = 2
Query:   53 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 481
            +++ Q ++  +AF L DK  +G ++ KEL  + +SL  + ++ +LQ  ++E+D D  G I + +F  L  RK+++ + E EL+ AFRV DK+  G I   +LR ++ +LG+ L D+E+ +MI E D DG G ++YEEF  +M+
Sbjct:    5 ISEKQFNDAHQAFKLHDKKDEGAVSNKELTNLFKSLALHVSDDKLQQWVDEMDEDATGVIRWEKFKILFERKVQEDEDERELRSAFRVLDKNNQGVIDVEDLRWILKSLGDDLNDDEIQDMINETDTDGSGTVDYEEFSALML 147          
The following BLAST results are available for this feature:
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 487
Match NameE-valueIdentityDescription
CDC31_SCHPO9.439e-2737.66Cell division control protein 31 OS=Schizosaccharo... [more]
MYL9_RAT1.233e-2642.75Myosin regulatory light polypeptide 9 OS=Rattus no... [more]
MLR_PHYPO1.233e-2642.14Myosin regulatory light chain OS=Physarum polyceph... [more]
TNNC_PATYE1.610e-2639.16Troponin C OS=Patinopecten yessoensis PE=1 SV=1[more]
MYL3_RAT1.610e-2643.87Myosin light chain 3 OS=Rattus norvegicus GN=Myl3 ... [more]
CML15_ARATH1.610e-2640.85Probable calcium-binding protein CML15 OS=Arabidop... [more]
MYL9_BOVIN2.103e-2642.03Myosin regulatory light polypeptide 9 OS=Bos tauru... [more]
ML12A_PONAB2.103e-2642.03Myosin regulatory light chain 12A OS=Pongo abelii ... [more]
ML12A_HUMAN2.103e-2642.03Myosin regulatory light chain 12A OS=Homo sapiens ... [more]
TNNC_TODPA2.746e-2637.06Troponin C OS=Todarodes pacificus PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00710 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00710 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623619 ID=BQ623619; Name=BQ623619; organism=Citrus sinensis; type=EST; length=567bp
TACCTATTTCTGAGTTGAAAAAACAAACGGAAGAAGAAAAATGGCGGATC
AGCTCACGGACGATCAGATCTCTGAGTTCAAAGAGGCCTTCAGCTTGTTT
GACAAGGATGGCGACGGTTGCATTACCACCAAGGAGCTTGGCACTGTTAT
GAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACATGATCA
ATGAAGTGGATGCTGATGGTAATGGAACTATTGATTTTCCTGAATTCCTA
AACCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGCTGAA
AGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCATCTCAGCTG
CTGAGCTGCGCCATGTGATGACAAACCTAGGAGAGAAACTTACTGATGAA
GAAGTTGATGAGATGATAAGGGAAGCTGATGTTGATGGTGATGGCCAGAT
AAATTATGAGGAATTTGTCAAGGTTATGATGGCCAAGTACTGACCCCACA
CCACCAATACTTATAAAATGGGTTGACTAAATTATAAAGGGATTCCTAGT
ATTTCTCTTTTACATTT
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