BQ623619

Overview
NameBQ623619
Unique NameBQ623619
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length567
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: MYL6B_MOUSE (Myosin light chain 6B OS=Mus musculus GN=Myl6b PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.746e-26
Identity = 65/153 (42.48%), Postives = 95/153 (62.09%), Query Frame = 2
Query:   38 KMADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG--NGTIDFPEFLNLM--ARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 484
            K+  +   DQ+ EF+EAF LFD+ GDG I   + G +MR+LGQNPT AE+  ++     +   +  +DF  FL ++    K +D  + E+  E  RVFDK+ NG +  AELRHV+T LGEK+T+EEV E +     D +G INYE F+K +++
Sbjct:   55 KVVIEFNKDQLEEFREAFELFDRVGDGKILYSQCGDLMRALGQNPTNAEVLKVLGNPKNEELKSRRVDFETFLPMLQAVAKNRDQGTYEDYLEGLRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEV-ETVLAGHEDSNGCINYEAFLKHILS 206          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: MYL3_MOUSE (Myosin light chain 3 OS=Mus musculus GN=Myl3 PE=2 SV=4)

HSP 1 Score: 118.242 bits (295), Expect = 2.746e-26
Identity = 68/155 (43.87%), Postives = 101/155 (65.16%), Query Frame = 2
Query:   38 KMADQLTDDQISEFKEAFSLFDKD--GDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD--GNGTIDFPEFLNLMAR--KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 484
            K+  + T +QI EFKEAF LFD+   G+  IT  + G V+R+LGQNPT+AE+  ++ +   +   +  +DF  FL ++    K KDT + E+  E  RVFDK+ NG +  AELRHV+  LGE+LT++EV++++   + D +G INYE FVK +MA
Sbjct:   50 KIKIEFTPEQIEEFKEAFLLFDRTPKGEMKITYGQCGDVLRALGQNPTQAEVLRVLGKPKQEELNSKMMDFETFLPMLQHISKNKDTGTYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGERLTEDEVEKLMAGQE-DSNGCINYEAFVKHIMA 203          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CATR_GIALA (Caltractin OS=Giardia lamblia GN=CAL PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.746e-26
Identity = 62/149 (41.61%), Postives = 91/149 (61.07%), Query Frame = 2
Query:   32 RRKMADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            RRK   +++++   E +EAF LFD D  G I   EL   MR+LG +  + E+Q ++NE D D  G I F +F  +M  K+ + D  EE+ +AFR+FD D  G IS   LR V   L E ++DEE+  MI+E D DGDG+I+ E+F+ ++
Sbjct:   21 RRKTRAEVSEEMKHEIREAFDLFDADRSGRIDFHELKVAMRALGFDVKKEEIQRIMNEYDRDQLGEITFQDFEEVMIEKISNRDPTEEILKAFRLFDDDATGRISLKNLRRVAKELSENISDEELLAMIQEFDRDGDGEIDEEDFIAIL 169          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CML10_ORYSJ (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica GN=CML10 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.587e-26
Identity = 69/138 (50.00%), Postives = 85/138 (61.59%), Query Frame = 2
Query:   74 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDS-EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 484
            E +  F  FD +GDG I+  ELG +  SLG   T+ EL  M+ E DADG+G I   EF  L A    D  + EE+L+ AFRVFD D NG ISAAEL  V+  LGEK T ++   MI   D +GDG I++EEF KVMMA
Sbjct:   40 EMERVFRKFDANGDGRISRSELGALFESLGHAATDDELARMMAEADADGDGFISLDEFAALNATASGDAAAVEEDLRHAFRVFDADGNGTISAAELARVLHGLGEKATVQQCRRMIEGVDQNGDGLISFEEF-KVMMA 176          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CDC31_YEAST (Cell division control protein 31 OS=Saccharomyces cerevisiae GN=CDC31 PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 3.587e-26
Identity = 60/142 (42.25%), Postives = 87/142 (61.27%), Query Frame = 2
Query:   50 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 475
            +L ++Q  E  EAFSLFD + DG +   EL   M++LG    + E+ D+I+E D++G   + + +F  +M  K+   D  +E+K AF++FD D  G IS   LR V   LGE LTDEE+  MI E D+DGDG+IN  EF+ +
Sbjct:   16 ELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAI 157          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: MYL3_BOVIN (Myosin light chain 3 OS=Bos taurus GN=MYL3 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.684e-26
Identity = 68/155 (43.87%), Postives = 101/155 (65.16%), Query Frame = 2
Query:   38 KMADQLTDDQISEFKEAFSLFDKDG--DGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD--GNGTIDFPEFLNLMAR--KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 484
            K+  + T +QI EFKEAF+LFD+    +  IT  + G V+R+LGQNPT+AE+  ++ +   +   +  +DF  FL ++    K KDT + E+  E  RVFDK+ NG +  AELRHV+  LGEKLT++EV++++   + D +G INYE FVK +MA
Sbjct:   45 KIKIEFTPEQIEEFKEAFTLFDRTPKCEMKITYGQCGDVLRALGQNPTQAEVLRVLGKPKQEELNSKMMDFDTFLPMLQHISKNKDTGTYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKLTEDEVEKLMAGQE-DSNGCINYEAFVKHIMA 198          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: MLE_HALRO (Myosin catalytic light chain, smooth muscle OS=Halocynthia roretzi PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.684e-26
Identity = 59/146 (40.41%), Postives = 96/146 (65.75%), Query Frame = 2
Query:   56 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT--IDFPEFLNLMARKMKDTD--SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 481
            +DD+I+E +EAF LFD+  +G +   ++G ++R+LGQNPT  ++  ++     +   T  + F EFL ++A+  + T+  S E+  E  RVFDK+ NG I  AELRHV++ LGEK+++EEV+E + +   D +G I+YEEF K ++
Sbjct:    4 SDDRITECQEAFELFDRSAEGKVFLGQVGDILRALGQNPTNGDVTKVLGNPPKEELATKQVSFSEFLPMLAQIERQTEHGSYEDFVEGLRVFDKENNGKIMGAELRHVLSTLGEKMSEEEVEESLLQGQQDPNGCIHYEEFSKYLL 149          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CABP1_RAT (Calcium-binding protein 1 OS=Rattus norvegicus GN=Cabp1 PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 4.684e-26
Identity = 59/147 (40.14%), Postives = 97/147 (65.99%), Query Frame = 2
Query:   53 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKM----KDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            L  ++I E +EAF  FDKD DG I  ++LG  MR++G  PTE EL ++  +++ +  G +DF +F+ LM  K+     D    +EL++AFR FD + +G IS +ELR  M   LG ++   +++E+IR+ D++GDG++++EEFV++M
Sbjct:  150 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 296          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CABP1_MOUSE (Calcium-binding protein 1 OS=Mus musculus GN=Cabp1 PE=1 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 4.684e-26
Identity = 59/147 (40.14%), Postives = 97/147 (65.99%), Query Frame = 2
Query:   53 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKM----KDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            L  ++I E +EAF  FDKD DG I  ++LG  MR++G  PTE EL ++  +++ +  G +DF +F+ LM  K+     D    +EL++AFR FD + +G IS +ELR  M   LG ++   +++E+IR+ D++GDG++++EEFV++M
Sbjct:   79 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 225          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CABP1_HUMAN (Calcium-binding protein 1 OS=Homo sapiens GN=CABP1 PE=1 SV=4)

HSP 1 Score: 117.472 bits (293), Expect = 4.684e-26
Identity = 59/147 (40.14%), Postives = 97/147 (65.99%), Query Frame = 2
Query:   53 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKM----KDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            L  ++I E +EAF  FDKD DG I  ++LG  MR++G  PTE EL ++  +++ +  G +DF +F+ LM  K+     D    +EL++AFR FD + +G IS +ELR  M   LG ++   +++E+IR+ D++GDG++++EEFV++M
Sbjct:  222 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 368          
The following BLAST results are available for this feature:
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 487
Match NameE-valueIdentityDescription
MYL6B_MOUSE2.746e-2642.48Myosin light chain 6B OS=Mus musculus GN=Myl6b PE=... [more]
MYL3_MOUSE2.746e-2643.87Myosin light chain 3 OS=Mus musculus GN=Myl3 PE=2 ... [more]
CATR_GIALA2.746e-2641.61Caltractin OS=Giardia lamblia GN=CAL PE=3 SV=1[more]
CML10_ORYSJ3.587e-2650.00Probable calcium-binding protein CML10 OS=Oryza sa... [more]
CDC31_YEAST3.587e-2642.25Cell division control protein 31 OS=Saccharomyces ... [more]
MYL3_BOVIN4.684e-2643.87Myosin light chain 3 OS=Bos taurus GN=MYL3 PE=1 SV... [more]
MLE_HALRO4.684e-2640.41Myosin catalytic light chain, smooth muscle OS=Hal... [more]
CABP1_RAT4.684e-2640.14Calcium-binding protein 1 OS=Rattus norvegicus GN=... [more]
CABP1_MOUSE4.684e-2640.14Calcium-binding protein 1 OS=Mus musculus GN=Cabp1... [more]
CABP1_HUMAN4.684e-2640.14Calcium-binding protein 1 OS=Homo sapiens GN=CABP1... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00710 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00710 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623619 ID=BQ623619; Name=BQ623619; organism=Citrus sinensis; type=EST; length=567bp
TACCTATTTCTGAGTTGAAAAAACAAACGGAAGAAGAAAAATGGCGGATC
AGCTCACGGACGATCAGATCTCTGAGTTCAAAGAGGCCTTCAGCTTGTTT
GACAAGGATGGCGACGGTTGCATTACCACCAAGGAGCTTGGCACTGTTAT
GAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACATGATCA
ATGAAGTGGATGCTGATGGTAATGGAACTATTGATTTTCCTGAATTCCTA
AACCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGCTGAA
AGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCATCTCAGCTG
CTGAGCTGCGCCATGTGATGACAAACCTAGGAGAGAAACTTACTGATGAA
GAAGTTGATGAGATGATAAGGGAAGCTGATGTTGATGGTGATGGCCAGAT
AAATTATGAGGAATTTGTCAAGGTTATGATGGCCAAGTACTGACCCCACA
CCACCAATACTTATAAAATGGGTTGACTAAATTATAAAGGGATTCCTAGT
ATTTCTCTTTTACATTT
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