BQ623619

Overview
NameBQ623619
Unique NameBQ623619
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length567
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CABP1_BOVIN (Calcium-binding protein 1 OS=Bos taurus GN=CABP1 PE=1 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 4.684e-26
Identity = 59/147 (40.14%), Postives = 97/147 (65.99%), Query Frame = 2
Query:   53 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKM----KDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            L  ++I E +EAF  FDKD DG I  ++LG  MR++G  PTE EL ++  +++ +  G +DF +F+ LM  K+     D    +EL++AFR FD + +G IS +ELR  M   LG ++   +++E+IR+ D++GDG++++EEFV++M
Sbjct:   78 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 224          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CALL4_XENTR (Calmodulin-like protein 4 OS=Xenopus tropicalis GN=calml4 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 6.118e-26
Identity = 63/144 (43.75%), Postives = 84/144 (58.33%), Query Frame = 2
Query:   41 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 472
            MA  L+ D I +FKE FSL+DK G G I   +L TVMR LG  PT  E+   +       +G +DF  FL +M R+ K  D E E+  A  + DK + G I   ELR  +T +GEKLT EEVD++++   V  DG + YEEFV+
Sbjct:    1 MAKFLSQDAIQKFKECFSLYDKKGKGKIPAGDLLTVMRCLGTCPTPGEVTRHLQVHKIGKDGEVDFSTFLTIMYRQQKQEDPENEIMVAMLMSDKQKKGVIPLKELRAKLTQMGEKLTPEEVDDLLKGVKVGPDGMVKYEEFVR 144          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: SM20_SCHMA (20 kDa calcium-binding protein OS=Schistosoma mansoni GN=SM20 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 7.990e-26
Identity = 55/145 (37.93%), Postives = 90/145 (62.07%), Query Frame = 2
Query:   53 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 487
            + +DQ+   K+ F  FDK G   I+T +LG   R+L        L++  ++VD D  G IDF  FL    +K+++   E +L++AFRV DK++ G I   +LR ++  LG+ LT+EE+D+MIR+ D DG G ++++EF K+M ++
Sbjct:   10 IQEDQVKIAKDVFKRFDKRGQEKISTTDLGPAFRALNLTVKPDTLKEWADQVDDDATGFIDFNGFLICYGKKLQEDQDERDLRDAFRVLDKNKRGEIDVEDLRWILKGLGDDLTEEEIDDMIRDTDTDGSGFVDFDEFYKLMTSE 154          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: MRLCA_RAT (Myosin regulatory light chain RLC-A OS=Rattus norvegicus GN=Rlc-a PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 7.990e-26
Identity = 57/138 (41.30%), Postives = 87/138 (63.04%), Query Frame = 2
Query:   65 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            QI EFKEAF++ D++ DG I  ++L  ++ S+G+NPT+  L  M+NE      G I+F  FL +   K+  TD E+ ++ AF  FD++  G I    LR ++T +G++ TDEEVDE+ REA +D  G  NY EF +++
Sbjct:   30 QIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLDAMMNEAP----GPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEAIGTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRIL 163          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CML6_ARATH (Calmodulin-like protein 6 OS=Arabidopsis thaliana GN=CML6 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.044e-25
Identity = 64/141 (45.39%), Postives = 91/141 (64.54%), Query Frame = 2
Query:   71 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKM---KDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK--LTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            +E    F +FDKDGDG ITTKEL    ++LG    E EL  +I ++D +G+G +D  EF  L    M   +D   EE++KEAF VFD++ +GFI+  EL+ V+++LG K   T EE  +MI + DVDGDG++NY EF ++M
Sbjct:    4 TELNRVFQMFDKDGDGKITTKELNESFKNLGIIIPEDELTQIIQKIDVNGDGCVDIEEFGELYKTIMVEDEDEVGEEDMKEAFNVFDRNGDGFITVDELKAVLSSLGLKQGKTLEECRKMIMQVDVDGDGRVNYMEFRQMM 144          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CML16_ARATH (Probable calcium-binding protein CML16 OS=Arabidopsis thaliana GN=CML16 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.780e-25
Identity = 59/148 (39.86%), Postives = 91/148 (61.49%), Query Frame = 2
Query:   41 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD--SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            MA     DQI + K+ F+ FD D DG +T  EL  ++RSLG  P   ++  ++N++D +GNG+++F E +  +   + +    ++E+L E FR FD+D NG I+AAEL   M  +G  LT  E+ EM+ EAD +GDG I++ EF  +M
Sbjct:    1 MASTKPTDQIKQLKDIFARFDMDKDGSLTQLELAALLRSLGIKPRSDQISLLLNQIDRNGNGSVEFDELVVAILPDINEEVLINQEQLMEVFRSFDRDGNGSITAAELAGSMAKMGHPLTYRELTEMMTEADSNGDGVISFNEFSHIM 148          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CDPKT_ARATH (Calcium-dependent protein kinase 29 OS=Arabidopsis thaliana GN=CPK29 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 1.780e-25
Identity = 60/146 (41.10%), Postives = 89/146 (60.96%), Query Frame = 2
Query:   41 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            +A+ L++++I   K+ F   D D  G IT  EL   +  LG   TE+E++ ++   D D +GTID+ EF+     + +  + EE L EAF+ FDKD++GFI+  EL+H MT  G    D  +DE+I + D D DG+INYEEFV +M
Sbjct:  378 IAENLSEEEIKGLKQTFKNMDTDESGTITFDELRNGLHRLGSKLTESEIKQLMEAADVDKSGTIDYIEFVTATMHRHR-LEKEENLIEAFKYFDKDRSGFITRDELKHSMTEYGMG-DDATIDEVINDVDTDNDGRINYEEFVAMM 521          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CABP4_HUMAN (Calcium-binding protein 4 OS=Homo sapiens GN=CABP4 PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 1.780e-25
Identity = 61/148 (41.22%), Postives = 94/148 (63.51%), Query Frame = 2
Query:   50 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSE----EELKEAFRVFDKDQNGFISAAELRH-VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            +L  +++ E + AF  FD D DG I+ +ELG  MR+LG  PTE EL ++   +     G +DF EF+ L+  K+++  +      EL+ AFR FD+D++G I+ AELR  V   LGE L   E+DEM+RE D++GDG ++++EFV ++
Sbjct:  125 ELGPEELDELQAAFEEFDTDRDGYISHRELGDCMRTLGYMPTEMELLEVSQHIKMRMGGRVDFEEFVELIGPKLREETAHMLGVRELRIAFREFDRDRDGRITVAELREAVPALLGEPLAGPELDEMLREVDLNGDGTVDFDEFVMML 272          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: POLC2_JUNOX (Polcalcin Jun o 2 OS=Juniperus oxycedrus PE=1 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 2.325e-25
Identity = 61/143 (42.66%), Postives = 90/143 (62.94%), Query Frame = 2
Query:   59 DDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 487
            +  + E +E F  FD +GDG I+  EL  ++RSLG +  EAE++ M+ E DADG+G +   EF++L  +      S ++LK AF+VFD+D NG ISAAEL H + ++GE  T EE   +I   D +GDG I+ EEF  +M ++
Sbjct:   21 EQSVHELEEVFKKFDANGDGKISGSELADILRSLGSDVGEAEVKAMMEEADADGDGYVSLQEFVDLNNKGA----SVKDLKNAFKVFDRDCNGSISAAELCHTLESVGEPCTIEESKNIIHNVDKNGDGLISVEEFQTMMTSE 159          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: TNNC3_DROME (Troponin C, isoform 3 OS=Drosophila melanogaster GN=TpnC73F PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 3.036e-25
Identity = 56/147 (38.10%), Postives = 98/147 (66.67%), Query Frame = 2
Query:   47 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSE---EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            + LT +QI+  ++AF+ FD    G I T+ +  ++R +GQ   +  L+++I EVD D +G ++F EF+ L A+ + + D+E   +EL+EAFR++DK  NGFI    L+ ++  L ++LT++E+D MI E D DG G ++++EF+++M
Sbjct:    6 EDLTPEQIAVLQKAFNSFDHQKTGSIPTEMVADILRLMGQPFDKKILEELIEEVDEDKSGRLEFGEFVQLAAKFIVEEDAEAMQKELREAFRLYDKQGNGFIPTTCLKEILKELDDQLTEQELDIMIEEIDSDGSGTVDFDEFMEMM 152          
The following BLAST results are available for this feature:
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 487
Match NameE-valueIdentityDescription
CABP1_BOVIN4.684e-2640.14Calcium-binding protein 1 OS=Bos taurus GN=CABP1 P... [more]
CALL4_XENTR6.118e-2643.75Calmodulin-like protein 4 OS=Xenopus tropicalis GN... [more]
SM20_SCHMA7.990e-2637.9320 kDa calcium-binding protein OS=Schistosoma mans... [more]
MRLCA_RAT7.990e-2641.30Myosin regulatory light chain RLC-A OS=Rattus norv... [more]
CML6_ARATH1.044e-2545.39Calmodulin-like protein 6 OS=Arabidopsis thaliana ... [more]
CML16_ARATH1.780e-2539.86Probable calcium-binding protein CML16 OS=Arabidop... [more]
CDPKT_ARATH1.780e-2541.10Calcium-dependent protein kinase 29 OS=Arabidopsis... [more]
CABP4_HUMAN1.780e-2541.22Calcium-binding protein 4 OS=Homo sapiens GN=CABP4... [more]
POLC2_JUNOX2.325e-2542.66Polcalcin Jun o 2 OS=Juniperus oxycedrus PE=1 SV=2[more]
TNNC3_DROME3.036e-2538.10Troponin C, isoform 3 OS=Drosophila melanogaster G... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00710 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00710 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623619 ID=BQ623619; Name=BQ623619; organism=Citrus sinensis; type=EST; length=567bp
TACCTATTTCTGAGTTGAAAAAACAAACGGAAGAAGAAAAATGGCGGATC
AGCTCACGGACGATCAGATCTCTGAGTTCAAAGAGGCCTTCAGCTTGTTT
GACAAGGATGGCGACGGTTGCATTACCACCAAGGAGCTTGGCACTGTTAT
GAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACATGATCA
ATGAAGTGGATGCTGATGGTAATGGAACTATTGATTTTCCTGAATTCCTA
AACCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGCTGAA
AGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCATCTCAGCTG
CTGAGCTGCGCCATGTGATGACAAACCTAGGAGAGAAACTTACTGATGAA
GAAGTTGATGAGATGATAAGGGAAGCTGATGTTGATGGTGATGGCCAGAT
AAATTATGAGGAATTTGTCAAGGTTATGATGGCCAAGTACTGACCCCACA
CCACCAATACTTATAAAATGGGTTGACTAAATTATAAAGGGATTCCTAGT
ATTTCTCTTTTACATTT
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