BQ623619

Overview
NameBQ623619
Unique NameBQ623619
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length567
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: MYL1_RABIT (Myosin light chain 1/3, skeletal muscle isoform OS=Oryctolagus cuniculus GN=MYL1 PE=1 SV=3)

HSP 1 Score: 113.235 bits (282), Expect = 8.834e-25
Identity = 64/149 (42.95%), Postives = 94/149 (63.09%), Query Frame = 2
Query:   50 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMI-NEVDADGNGT-IDFPEFLNLMAR--KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 484
            + + +Q  EFKEAF L+D+ GD  IT  ++G V+R+LG NPT AE++ ++ N  + + N   I+F +FL ++      KD  + E+  E  RVFDK+ NG +  AELRHV+  LGEK+ +EEV E +     D +G INYE FVK +M+
Sbjct:   44 EFSKEQQDEFKEAFLLYDRTGDSKITLSQVGDVLRALGTNPTNAEVKKVLGNPSNEEMNAKKIEFEQFLPMLQAISNNKDQGTYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEV-EALMAGQEDSNGCINYEAFVKHIMS 191          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CABP2_BOVIN (Calcium-binding protein 2 OS=Bos taurus GN=CABP2 PE=2 SV=3)

HSP 1 Score: 113.235 bits (282), Expect = 8.834e-25
Identity = 62/148 (41.89%), Postives = 94/148 (63.51%), Query Frame = 2
Query:   50 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKM----KDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            +L  ++I E + AF  FD+D DG I  +ELG  MR+LG  PTE EL ++  ++     G +DF +F+ LM  K+     D     EL++AFR FD + +G IS  ELR  +   LGE+L+  EVDE++R+ D++GDG +++EEFV++M
Sbjct:   17 ELRPEEIEELQAAFQEFDRDRDGYIGYQELGACMRTLGYMPTEMELIEISQQI---SGGKVDFEDFVELMGPKLLAETADMIGVRELRDAFREFDTNGDGCISLGELRAALKALLGERLSQREVDEILRDIDLNGDGLVDFEEFVRMM 161          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: MYL1_RAT (Myosin light chain 1/3, skeletal muscle isoform OS=Rattus norvegicus GN=Myl1 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.154e-24
Identity = 64/149 (42.95%), Postives = 95/149 (63.76%), Query Frame = 2
Query:   50 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMI-NEVDADGNGT-IDFPEFLNLMAR--KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 484
            + + +Q  EFKEAF LFD+ G+  IT  ++G V+R+LG NPT AE++ ++ N  + + N   I+F +FL +M      KD    E+  E  RVFDK+ NG +  AELRHV+  LGEK+ +EEV+ ++   + D +G INYE FVK +M+
Sbjct:   41 EFSKEQQEEFKEAFLLFDRTGECKITLSQVGDVLRALGTNPTNAEVKKVLGNPSNEEMNAKKIEFEQFLPMMQAISNNKDQGGYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEVEALLAGQE-DSNGCINYEAFVKHIMS 188          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CML5_ARATH (Calmodulin-like protein 5 OS=Arabidopsis thaliana GN=CML5 PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.154e-24
Identity = 59/143 (41.26%), Postives = 93/143 (65.03%), Query Frame = 2
Query:   71 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKD-----TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK--LTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            SE K  F +FDK+GDG IT +EL   + +LG    + +L  MI+++DA+G+G +D  EF +L +  + +        EE++K+AF VFD+D +GFI+  EL+ VM +LG K   T +   +MI + D DGDG++NY+EF+++M
Sbjct:   64 SELKRVFQMFDKNGDGRITKEELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDIDEFESLYSSIVDEHHNDGETEEEDMKDAFNVFDQDGDGFITVEELKSVMASLGLKQGKTLDGCKKMIMQVDADGDGRVNYKEFLQMM 206          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CML2_ARATH (Calmodulin-like protein 2 OS=Arabidopsis thaliana GN=CML2 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.154e-24
Identity = 56/137 (40.88%), Postives = 90/137 (65.69%), Query Frame = 2
Query:   74 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK--LTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            E    F +FDK+GDG I   EL    +S+G    E E+ +MI ++D +G+G +D  EF +L    +++ + EE+++EAFRVFD++ +GFI+  ELR V+ ++G K   T E+  +MI + DVDGDG +N++EF ++M
Sbjct:    5 ELSRVFQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDIDEFGSLYQEMVEEKEEEEDMREAFRVFDQNGDGFITDEELRSVLASMGLKQGRTLEDCKKMISKVDVDGDGMVNFKEFKQMM 141          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CML27_ARATH (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana GN=CML27 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.154e-24
Identity = 57/135 (42.22%), Postives = 84/135 (62.22%), Query Frame = 2
Query:   74 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            E K+ F  FD +GDG I+  ELG V +++G + TE EL  ++ EVD D +G I+  EF  L     + + S  E+++AF ++D+D+NG ISA+EL  V+  LG   + E+   MI   D DGDG +N+EEF K+M
Sbjct:   23 ELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFSTLC----RSSSSAAEIRDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCTRMIGPVDADGDGNVNFEEFQKMM 153          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: MLRH_CAEEL (Probable myosin regulatory light chain OS=Caenorhabditis elegans GN=mlc-4 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.507e-24
Identity = 62/161 (38.51%), Postives = 97/161 (60.25%), Query Frame = 2
Query:   20 KTNGRRKMADQLTDD--------QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            KT  RR+   + T +        QI EFKEAF++ D++ DG I  ++L  +  SLG+  TE  +  MINE  A G   I+F  FL L   K+  TD EE ++ AF+ FD+D +G ++   LR ++T +GE+ ++E+VDE+ R+A + G GQ +Y EF +++
Sbjct:    5 KTVNRRQRPQRATSNVFAMFDQAQIQEFKEAFNMIDQNRDGFIDQEDLKDMFASLGKEVTEQFIDSMINE--APGAQPINFTMFLTLFGEKLTGTDPEEVIRNAFQCFDEDNSGKLNEEHLRELLTTMGERYSEEQVDELFRDAPIKG-GQFDYVEFTRML 162          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CABP2_HUMAN (Calcium-binding protein 2 OS=Homo sapiens GN=CABP2 PE=1 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 1.507e-24
Identity = 61/148 (41.22%), Postives = 94/148 (63.51%), Query Frame = 2
Query:   50 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKM----KDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            +L  ++I E + AF  FD+D DG I  +ELG  MR+LG  PTE EL ++  ++     G +DF +F+ LM  K+     D     EL++AFR FD + +G IS  ELR  +   LGE+L+  EVDE++++ D++GDG +++EEFV++M
Sbjct:   74 ELRPEEIEELQVAFQEFDRDQDGYIGCRELGACMRTLGYMPTEMELIEISQQI---SGGKVDFEDFVELMGPKLLAETADMIGVRELRDAFREFDTNGDGRISVGELRAALKALLGERLSQREVDEILQDVDLNGDGLVDFEEFVRMM 218          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: SQH_DROME (Myosin regulatory light chain sqh OS=Drosophila melanogaster GN=sqh PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.968e-24
Identity = 63/165 (38.18%), Postives = 99/165 (60.00%), Query Frame = 2
Query:   20 KTNGRR----KMADQLTDD--------QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            KT GRR    K A + T +        QI+EFKEAF++ D++ DG +  ++L  ++ SLG+NPT+  L  M+NE      G I+F  FL L   +++ TD E+ +K AF  FD++  G +    LR ++T +G++ TDE+VDEM REA +  +G  +Y EF +++
Sbjct:    5 KTAGRRATTKKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGKNPTDDYLDGMMNEAP----GPINFTMFLTLFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVDEMYREAPIK-NGLFDYLEFTRIL 164          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: MYL1_MOUSE (Myosin light chain 1/3, skeletal muscle isoform OS=Mus musculus GN=Myl1 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 2.570e-24
Identity = 63/149 (42.28%), Postives = 95/149 (63.76%), Query Frame = 2
Query:   50 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMI-NEVDADGNGT-IDFPEFLNLMAR--KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 484
            + + +Q  +FKEAF LFD+ G+  IT  ++G V+R+LG NPT AE++ ++ N  + + N   I+F +FL +M      KD    E+  E  RVFDK+ NG +  AELRHV+  LGEK+ +EEV+ ++   + D +G INYE FVK +M+
Sbjct:   40 EFSKEQQEDFKEAFLLFDRTGECKITLSQVGDVLRALGTNPTNAEVKKVLGNPSNEEMNAKKIEFEQFLPMMQAISNNKDQGGYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEVEALLAGQE-DSNGCINYEAFVKHIMS 187          
The following BLAST results are available for this feature:
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 487
Match NameE-valueIdentityDescription
MYL1_RABIT8.834e-2542.95Myosin light chain 1/3, skeletal muscle isoform OS... [more]
CABP2_BOVIN8.834e-2541.89Calcium-binding protein 2 OS=Bos taurus GN=CABP2 P... [more]
MYL1_RAT1.154e-2442.95Myosin light chain 1/3, skeletal muscle isoform OS... [more]
CML5_ARATH1.154e-2441.26Calmodulin-like protein 5 OS=Arabidopsis thaliana ... [more]
CML2_ARATH1.154e-2440.88Calmodulin-like protein 2 OS=Arabidopsis thaliana ... [more]
CML27_ARATH1.154e-2442.22Probable calcium-binding protein CML27 OS=Arabidop... [more]
MLRH_CAEEL1.507e-2438.51Probable myosin regulatory light chain OS=Caenorha... [more]
CABP2_HUMAN1.507e-2441.22Calcium-binding protein 2 OS=Homo sapiens GN=CABP2... [more]
SQH_DROME1.968e-2438.18Myosin regulatory light chain sqh OS=Drosophila me... [more]
MYL1_MOUSE2.570e-2442.28Myosin light chain 1/3, skeletal muscle isoform OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00710 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00710 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623619 ID=BQ623619; Name=BQ623619; organism=Citrus sinensis; type=EST; length=567bp
TACCTATTTCTGAGTTGAAAAAACAAACGGAAGAAGAAAAATGGCGGATC
AGCTCACGGACGATCAGATCTCTGAGTTCAAAGAGGCCTTCAGCTTGTTT
GACAAGGATGGCGACGGTTGCATTACCACCAAGGAGCTTGGCACTGTTAT
GAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACATGATCA
ATGAAGTGGATGCTGATGGTAATGGAACTATTGATTTTCCTGAATTCCTA
AACCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGCTGAA
AGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCATCTCAGCTG
CTGAGCTGCGCCATGTGATGACAAACCTAGGAGAGAAACTTACTGATGAA
GAAGTTGATGAGATGATAAGGGAAGCTGATGTTGATGGTGATGGCCAGAT
AAATTATGAGGAATTTGTCAAGGTTATGATGGCCAAGTACTGACCCCACA
CCACCAATACTTATAAAATGGGTTGACTAAATTATAAAGGGATTCCTAGT
ATTTCTCTTTTACATTT
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