BQ623619

Overview
NameBQ623619
Unique NameBQ623619
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length567
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CML24_ARATH (Calcium-binding protein CML24 OS=Arabidopsis thaliana GN=CML24 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 2.570e-24
Identity = 59/141 (41.84%), Postives = 86/141 (60.99%), Query Frame = 2
Query:   68 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKM----KDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            + + K+ F  FDK+GDG I+  EL  V+R+L    +  E   M+ + D DGNG ID  EF+ L    +     + +   +LKEAF ++D D NG ISA EL  VM NLGEK + ++  +MI + D+DGDG +N++EF K+M
Sbjct:   15 MDDIKKVFQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLDGNGFIDLDEFVALFQIGIGGGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLGEKCSVQDCKKMISKVDIDGDGCVNFDEFKKMM 155          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CDPKC_ARATH (Calcium-dependent protein kinase 12 OS=Arabidopsis thaliana GN=CPK12 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.570e-24
Identity = 59/148 (39.86%), Postives = 88/148 (59.46%), Query Frame = 2
Query:   35 RKMADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            R +A++L++++I   KE F + D D  G IT +EL   MR +G    E+E+Q+++   D D +GTID+ EFL      +   + EE L  AF  FDKD +G+I+  EL+      G  + D  +DEMI++ D D DGQI+Y EFV +M
Sbjct:  314 RVIAERLSEEEIGGLKELFKMIDTDKSGTITFEELKDSMRRVGSELMESEIQELLRAADVDESGTIDYGEFLAATIH-LNKLEREENLVAAFSFFDKDASGYITIEELQQAWKEFG--INDSNLDEMIKDIDQDNDGQIDYGEFVAMM 458          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CABP2_MOUSE (Calcium-binding protein 2 OS=Mus musculus GN=Cabp2 PE=2 SV=3)

HSP 1 Score: 111.694 bits (278), Expect = 2.570e-24
Identity = 61/148 (41.22%), Postives = 94/148 (63.51%), Query Frame = 2
Query:   50 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKM----KDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            +L  ++I E + AF  FD+D DG I  +ELG  MR+LG  PTE EL ++  ++     G +DF +F+ LM  K+     D     EL++AFR FD + +G IS  ELR  +   LGE+L+  EVDE++++ D++GDG +++EEFV++M
Sbjct:   70 ELRPEEIEELQIAFQEFDRDRDGYIGYRELGACMRTLGYMPTEMELIEISQQI---SGGKVDFEDFVELMGPKLLAETADMIGVRELRDAFREFDTNGDGCISVGELRAALKALLGERLSQREVDEILQDIDLNGDGLVDFEEFVRMM 214          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: MYL1_BOVIN (Myosin light chain 1/3, skeletal muscle isoform OS=Bos taurus GN=MYL1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.384e-24
Identity = 64/149 (42.95%), Postives = 93/149 (62.42%), Query Frame = 2
Query:   50 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMI-NEVDADGNGT-IDFPEFLNLMAR--KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 484
            + +  Q  EFKEAF LFD+ G+  IT  ++G V+R+LG NPT AE++ ++ N  + + N   I+F +FL ++      KD  + E+  E  RVFDK+ NG +  AELRHV+  LGEK+ +EEV E +     D +G INYE FVK +M+
Sbjct:   44 EFSKQQQDEFKEAFLLFDRTGECKITLSQVGDVLRALGTNPTNAEVKKVLGNPSNEEMNAKKIEFEQFLPMLQAISNNKDQGTYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEV-EALMAGQEDSNGCINYEAFVKHIMS 191          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: MLR_DICDI (Myosin regulatory light chain OS=Dictyostelium discoideum GN=mlcR PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.384e-24
Identity = 57/152 (37.50%), Postives = 90/152 (59.21%), Query Frame = 2
Query:   32 RRKMADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 487
            R + +  L ++Q++E KEAF LFDKD  G I    L T  +  G    E +L  M  E D   +G I FPEF+++M+R+MK T +E+ L  AF+ FD + NG+I   +L   +T LG+KLT+ E+ E++  ++ +   Q+ Y+ FV  + +K
Sbjct:   10 REESSVVLGEEQVAELKEAFELFDKDRTGFIKKDALKTTCKQFGVFVMEDQLDAMFAEADTTKSGAIGFPEFMSMMSRRMKQTSNEQILMNAFKTFDPEGNGYILTKDLSKALTTLGDKLTEAELQELLSISE-NEQKQVKYDLFVNTLFSK 160          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: ALL8_OLEEU (Calcium-binding allergen Ole e 8 OS=Olea europaea PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.384e-24
Identity = 56/142 (39.44%), Postives = 88/142 (61.97%), Query Frame = 2
Query:   71 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDS---EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 487
            +E +  F+ FD +GDG I+  EL  V+++LG N ++ E+  ++ E+D D +G I+  EF   +  +     S   E ELKEAF ++D+D NG IS+ EL  ++T LGE+  + +  EMI+  D DGDG +++EEF K+M  K
Sbjct:   19 NEVQGVFNRFDANGDGKISGDELAGVLKALGSNTSKEEIGRIMEEIDTDKDGFINVQEFAAFVKAETDPYPSSGGENELKEAFELYDQDHNGLISSVELHKILTRLGERYAEHDCVEMIKSVDSDGDGYVSFEEFKKMMTNK 160          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: MLR4_SCHPO (Myosin regulatory light chain cdc4 OS=Schizosaccharomyces pombe GN=cdc4 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.726e-24
Identity = 60/145 (41.38%), Postives = 94/145 (64.83%), Query Frame = 2
Query:   56 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK--MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 484
            TDD  S +K+AFSLFD+ G G I    +G ++R+ GQNPT AE+ ++ + + A+    +D  +FL ++ R          EE  + F+VFDKD  G I   ELR+V+T+LGEKL++EE+DE+++   V  DG +NY +FV++++A
Sbjct:    3 TDD--SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAE----VDMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMILA 140          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: MLEX_CHICK (Myosin light chain, embryonic OS=Gallus gallus PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.726e-24
Identity = 62/147 (42.18%), Postives = 93/147 (63.27%), Query Frame = 2
Query:   62 DQISEFKEAFSLFDKDGDGC--ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT--IDFPEFLNLMAR--KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 484
            +QI EFKEAFSLFD+   G   IT  + G V+R+LG NPT AE+  ++ +   +   T  +DF  FL ++    + ++  + E+  E  RVFDK+ NG +  AELRHV+  LGEK+T+ EV++++   + D +G INYE FVK +M+
Sbjct:   39 EQIEEFKEAFSLFDRTPTGAMQITYAQCGDVLRALGHNPTNAEVLKVLGKPKPEDLNTKMLDFETFLPILQHFTRNREQGTFEDFVEGLRVFDKEGNGLVMGAELRHVLVTLGEKMTESEVEQLMAGLE-DANGCINYEAFVKHIMS 184          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CML16_ORYSJ (Probable calcium-binding protein CML16 OS=Oryza sativa subsp. japonica GN=CML16 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 7.479e-24
Identity = 59/140 (42.14%), Postives = 84/140 (60.00%), Query Frame = 2
Query:   71 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEA----ELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            +E +  F+ FD DGDG I+  EL  V R++   P+E+    E+  M+NE+D D +G +D  EF     R   D + E EL+ AF V+D D +G I+AAEL  V+  +GE  + EE + MI   DVDGDG + +EEF K+M
Sbjct:   26 AEIERVFTRFDADGDGRISPSELAAVTRAIAPPPSESAGGREVAAMMNELDTDRDGFVDLGEFAAFHGRGRGDAEHEAELRAAFDVYDVDGDGRITAAELGKVLGRIGEGCSAEECERMIASVDVDGDGCVGFEEFKKMM 165          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: TNNC1_BALNU (Troponin C, isoform 1 OS=Balanus nubilis PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 9.767e-24
Identity = 54/145 (37.24%), Postives = 90/145 (62.07%), Query Frame = 2
Query:   53 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSE---EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            L  +QI   + AF  FD+D  G I+ + +  ++R +G   +    + +I E+D DG+G I+F EFL L A+ + + D E   +ELKEAFR++DK+ NG+I+   L+ ++  L  +LT EE+  +I E D DG G ++++EF+ +M
Sbjct:   12 LEKEQIVVLRRAFDSFDRDKKGYISPETVSDILRMMGIKVSSTSFKQIIEEIDEDGSGQIEFSEFLQLAAKFLIEEDEEAMMKELKEAFRLYDKEGNGYITTQTLKEILHELDARLTAEELVGIIEEIDEDGSGTVDFDEFMAMM 156          
The following BLAST results are available for this feature:
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 487
Match NameE-valueIdentityDescription
CML24_ARATH2.570e-2441.84Calcium-binding protein CML24 OS=Arabidopsis thali... [more]
CDPKC_ARATH2.570e-2439.86Calcium-dependent protein kinase 12 OS=Arabidopsis... [more]
CABP2_MOUSE2.570e-2441.22Calcium-binding protein 2 OS=Mus musculus GN=Cabp2... [more]
MYL1_BOVIN4.384e-2442.95Myosin light chain 1/3, skeletal muscle isoform OS... [more]
MLR_DICDI4.384e-2437.50Myosin regulatory light chain OS=Dictyostelium dis... [more]
ALL8_OLEEU4.384e-2439.44Calcium-binding allergen Ole e 8 OS=Olea europaea ... [more]
MLR4_SCHPO5.726e-2441.38Myosin regulatory light chain cdc4 OS=Schizosaccha... [more]
MLEX_CHICK5.726e-2442.18Myosin light chain, embryonic OS=Gallus gallus PE=... [more]
CML16_ORYSJ7.479e-2442.14Probable calcium-binding protein CML16 OS=Oryza sa... [more]
TNNC1_BALNU9.767e-2437.24Troponin C, isoform 1 OS=Balanus nubilis PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00710 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00710 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623619 ID=BQ623619; Name=BQ623619; organism=Citrus sinensis; type=EST; length=567bp
TACCTATTTCTGAGTTGAAAAAACAAACGGAAGAAGAAAAATGGCGGATC
AGCTCACGGACGATCAGATCTCTGAGTTCAAAGAGGCCTTCAGCTTGTTT
GACAAGGATGGCGACGGTTGCATTACCACCAAGGAGCTTGGCACTGTTAT
GAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACATGATCA
ATGAAGTGGATGCTGATGGTAATGGAACTATTGATTTTCCTGAATTCCTA
AACCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGCTGAA
AGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCATCTCAGCTG
CTGAGCTGCGCCATGTGATGACAAACCTAGGAGAGAAACTTACTGATGAA
GAAGTTGATGAGATGATAAGGGAAGCTGATGTTGATGGTGATGGCCAGAT
AAATTATGAGGAATTTGTCAAGGTTATGATGGCCAAGTACTGACCCCACA
CCACCAATACTTATAAAATGGGTTGACTAAATTATAAAGGGATTCCTAGT
ATTTCTCTTTTACATTT
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