BQ623619

Overview
NameBQ623619
Unique NameBQ623619
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length567
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: MYL5_FELCA (Myosin light chain 5 OS=Felis catus GN=MYL5 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 6.132e-18
Identity = 50/139 (35.97%), Postives = 82/139 (58.99%), Query Frame = 2
Query:   65 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            QI EFKEAF+L D++ DG I  ++L     SLG+ N  + EL  M+ E     +G I+F  FLN+   K+  TD+EE +  AF++ D +  G I+   ++ ++ +  +K+T EEVD+M + A +D  G ++Y+    V+
Sbjct:   31 QIQEFKEAFTLMDQNRDGFIDKEDLKDTYASLGKTNIKDDELDAMLKEA----SGPINFTMFLNMFGAKLTGTDAEETILNAFKMLDPEGKGSINKDYIKRLLMSQADKMTAEEVDQMFQFATIDAAGNLDYKALSYVL 165          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CANB1_RAT (Calcineurin subunit B type 1 OS=Rattus norvegicus GN=Ppp3r1 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 8.009e-18
Identity = 53/152 (34.87%), Postives = 85/152 (55.92%), Query Frame = 2
Query:   38 KMADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            +M      D+I    + F   D D  G ++ +E  + +  L QNP    +Q +I+  D DGNG +DF EF+  +++     D E++L+ AFR++D D++G+IS  EL  V+      NL +    + VD+ I  AD DGDG+I++EEF  V+
Sbjct:   10 EMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 157          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CANB1_MOUSE (Calcineurin subunit B type 1 OS=Mus musculus GN=Ppp3r1 PE=1 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 8.009e-18
Identity = 53/152 (34.87%), Postives = 85/152 (55.92%), Query Frame = 2
Query:   38 KMADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            +M      D+I    + F   D D  G ++ +E  + +  L QNP    +Q +I+  D DGNG +DF EF+  +++     D E++L+ AFR++D D++G+IS  EL  V+      NL +    + VD+ I  AD DGDG+I++EEF  V+
Sbjct:   10 EMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 157          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CANB1_HUMAN (Calcineurin subunit B type 1 OS=Homo sapiens GN=PPP3R1 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 8.009e-18
Identity = 53/152 (34.87%), Postives = 85/152 (55.92%), Query Frame = 2
Query:   38 KMADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            +M      D+I    + F   D D  G ++ +E  + +  L QNP    +Q +I+  D DGNG +DF EF+  +++     D E++L+ AFR++D D++G+IS  EL  V+      NL +    + VD+ I  AD DGDG+I++EEF  V+
Sbjct:   10 EMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 157          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CANB1_BOVIN (Calcineurin subunit B type 1 OS=Bos taurus GN=PPP3R1 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 8.009e-18
Identity = 53/152 (34.87%), Postives = 85/152 (55.92%), Query Frame = 2
Query:   38 KMADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            +M      D+I    + F   D D  G ++ +E  + +  L QNP    +Q +I+  D DGNG +DF EF+  +++     D E++L+ AFR++D D++G+IS  EL  V+      NL +    + VD+ I  AD DGDG+I++EEF  V+
Sbjct:   10 EMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 157          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: MLRV_HUMAN (Myosin regulatory light chain 2, ventricular/cardiac muscle isoform OS=Homo sapiens GN=MYL2 PE=1 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 1.046e-17
Identity = 49/139 (35.25%), Postives = 76/139 (54.68%), Query Frame = 2
Query:   65 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            QI EFKEAF++ D++ DG I   +L     +LG+ N    E+ +MI E      G I+F  FL +   K+K  D EE +  AF+VFD +  G + A  +R ++T   E+ + EEVD+M      D  G ++Y+  V ++
Sbjct:   25 QIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRVNVKNEEIDEMIKEAP----GPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLKADYVREMLTTQAERFSKEEVDQMFAAFPPDVTGNLDYKNLVHII 159          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: EFCB2_MOUSE (EF-hand calcium-binding domain-containing protein 2 OS=Mus musculus GN=Efcab2 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.046e-17
Identity = 49/141 (34.75%), Postives = 81/141 (57.45%), Query Frame = 2
Query:   74 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGTIDFPEFLNLMARKMKD----TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 481
            + K+AF +FD + +  +  +E+GT++RSLG  PTE EL D I E+ + +  G I F +F+ +M R + +      +E+ L  AF V D  + GF++  EL   MT  GE  + EE++EM+  A       INY +++ +M+
Sbjct:   20 KIKDAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDFIAEIEEEEPTGYIRFEKFIPVMTRALVERRYRPAAEDILLRAFEVLDPAKRGFLTKDELVKYMTEEGEPFSQEEMEEMLSAAIDPESNTINYRDYITMMV 160          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CML31_ARATH (Probable calcium-binding protein CML31 OS=Arabidopsis thaliana GN=CML31 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.046e-17
Identity = 54/136 (39.71%), Postives = 75/136 (55.15%), Query Frame = 2
Query:   83 EAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK---MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 481
            E F   DK+ DG I   E    +R      T  E+  M   +D DG+G ID  EF + +       KDT+ E  +KEAF ++D D +G ISA+E+  V+  LGEK T E+   M++  D D DG +N+EEF K+MM
Sbjct:    3 EIFESVDKNKDGKILWDEFAEAIRVFSPQITSEEIDKMFIVLDVDGDGQIDDVEFASCLMVNGGGEKDTEEEVVMKEAFDLYDMDGDGKISASEIHVVLKRLGEKHTMEDCVVMVQTVDKDSDGFVNFEEF-KIMM 137          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: MLR_BOMMO (Myosin regulatory light chain 2 OS=Bombyx mori PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.366e-17
Identity = 50/141 (35.46%), Postives = 80/141 (56.74%), Query Frame = 2
Query:   65 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMK-DTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 484
            Q++EFKEAF L D D DG I   +L     SLG+  +E EL +M+ E     +G I+F + L L A +M   +D ++ +  AF+ FD++  G I +  LRH +   G+K + +EVDE   + D+D  G I+  + + ++ A
Sbjct:   56 QVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYIDTTKLIAMLTA 190          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: MLRV_RAT (Myosin regulatory light chain 2, ventricular/cardiac muscle isoform OS=Rattus norvegicus GN=Myl2 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.366e-17
Identity = 49/151 (32.45%), Postives = 78/151 (51.66%), Query Frame = 2
Query:   29 GRRKMADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            G   +       QI EFKEAF++ D++ DG I   +L     +LG+ N    E+ +MI E      G I+F  FL +   K+K  D EE +  AF+VFD +  G + A  +R ++T   E+ + EE+D+M      D  G ++Y+  V ++
Sbjct:   13 GSSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRVNVKNEEIDEMIKEAP----GPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGSLKADYVREMLTTQAERFSKEEIDQMFAAFPPDVTGNLDYKNLVHII 159          
The following BLAST results are available for this feature:
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 487
Match NameE-valueIdentityDescription
MYL5_FELCA6.132e-1835.97Myosin light chain 5 OS=Felis catus GN=MYL5 PE=2 S... [more]
CANB1_RAT8.009e-1834.87Calcineurin subunit B type 1 OS=Rattus norvegicus ... [more]
CANB1_MOUSE8.009e-1834.87Calcineurin subunit B type 1 OS=Mus musculus GN=Pp... [more]
CANB1_HUMAN8.009e-1834.87Calcineurin subunit B type 1 OS=Homo sapiens GN=PP... [more]
CANB1_BOVIN8.009e-1834.87Calcineurin subunit B type 1 OS=Bos taurus GN=PPP3... [more]
MLRV_HUMAN1.046e-1735.25Myosin regulatory light chain 2, ventricular/cardi... [more]
EFCB2_MOUSE1.046e-1734.75EF-hand calcium-binding domain-containing protein ... [more]
CML31_ARATH1.046e-1739.71Probable calcium-binding protein CML31 OS=Arabidop... [more]
MLR_BOMMO1.366e-1735.46Myosin regulatory light chain 2 OS=Bombyx mori PE=... [more]
MLRV_RAT1.366e-1732.45Myosin regulatory light chain 2, ventricular/cardi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00710 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00710 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623619 ID=BQ623619; Name=BQ623619; organism=Citrus sinensis; type=EST; length=567bp
TACCTATTTCTGAGTTGAAAAAACAAACGGAAGAAGAAAAATGGCGGATC
AGCTCACGGACGATCAGATCTCTGAGTTCAAAGAGGCCTTCAGCTTGTTT
GACAAGGATGGCGACGGTTGCATTACCACCAAGGAGCTTGGCACTGTTAT
GAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACATGATCA
ATGAAGTGGATGCTGATGGTAATGGAACTATTGATTTTCCTGAATTCCTA
AACCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGCTGAA
AGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCATCTCAGCTG
CTGAGCTGCGCCATGTGATGACAAACCTAGGAGAGAAACTTACTGATGAA
GAAGTTGATGAGATGATAAGGGAAGCTGATGTTGATGGTGATGGCCAGAT
AAATTATGAGGAATTTGTCAAGGTTATGATGGCCAAGTACTGACCCCACA
CCACCAATACTTATAAAATGGGTTGACTAAATTATAAAGGGATTCCTAGT
ATTTCTCTTTTACATTT
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