BQ623619

Overview
NameBQ623619
Unique NameBQ623619
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length567
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: MLRA_PATYE (Myosin regulatory light chain A, smooth adductor muscle OS=Patinopecten yessoensis PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.848e-15
Identity = 44/143 (30.77%), Postives = 81/143 (56.64%), Query Frame = 2
Query:   50 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            +L    + E KEAF++ D++ DG I   +L  +  SLG+ P + EL  M+ E      G ++F  FL++ + K+  TD+EE L+ AF +FD+     ++   ++ ++ N+G+  T +E+    +EA V G G+ +Y +F  ++
Sbjct:   16 RLPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAP----GPLNFTMFLSIFSDKLSGTDTEETLRNAFAMFDELDTKKLNIEYIKDLLENMGDNFTKDEMRMTFKEAPVTG-GKFDYVKFTAMI 153          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CDPKB_ORYSJ (Calcium-dependent protein kinase isoform 11 OS=Oryza sativa subsp. japonica GN=CPK11 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 2.848e-15
Identity = 48/148 (32.43%), Postives = 78/148 (52.70%), Query Frame = 2
Query:   35 RKMADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            R +A++L++++I+  +E F   D    G IT  EL   +R  G    + E+ D++     D N TI + EF+      +   + EE L  AF  FDKD +G+I+  +L+         + D  ++E+I E D + DGQI+Y EFV +M
Sbjct:  371 RVIAERLSEEEIAGLREMFKAVDTKNRGVITFGELREGLRRFGAEFKDTEIGDIMEAAHNDNNVTIHYEEFI-AATLPLNKIEREEHLLAAFTYFDKDGSGYITVDKLQRACGE--HNMEDSLLEEIISEVDQNNDGQIDYAEFVAMM 515          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CANB2_DROME (Calcineurin subunit B type 2 OS=Drosophila melanogaster GN=CanB2 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 2.848e-15
Identity = 51/152 (33.55%), Postives = 81/152 (53.29%), Query Frame = 2
Query:   38 KMADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            +M      D+I    + F   D D  G ++  E  + +  L QNP    +Q +I+  DADGNG +DF EF+  +++     D   +L+ AFR++D D +G+IS  EL  V+      NL +    + VD+ I  AD D DG+I+++EF  V+
Sbjct:   10 EMCSNFDADEIRRLGKRFRKLDLDNSGALSVDEFMS-LPELQQNPL---VQRVIDIFDADGNGEVDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIGFADKDEDGKISFDEFCSVV 157          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CANB2_BOVIN (Calcineurin subunit B type 2 OS=Bos taurus GN=PPP3R2 PE=2 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 2.848e-15
Identity = 50/152 (32.89%), Postives = 85/152 (55.92%), Query Frame = 2
Query:   38 KMADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL-GEKLTD----EEVDEMIREADVDGDGQINYEEFVKVM 478
            ++     +D+I   ++ F   D D    ++ KE  T M  L +NP    +Q +I+  D DG+G +DF EF+   ++     D E++L+ AF ++D D++G+IS  EL  V+  + G+ L D    + VD+ I   D DGDG+I+++EF  V+
Sbjct:   10 EICSHFDEDEIKRLRKRFKKLDLDSSSALSVKEF-TSMPELQENPL---VQRVIDVFDTDGDGQVDFREFILGTSQFSVRGDEEQKLRFAFSIYDMDKDGYISNGELFQVLKMMVGDNLKDWQLQQLVDKTIILLDKDGDGKISFQEFSAVV 157          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: MLR_PATSP (Myosin regulatory light chain OS=Patinopecten sp. PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.720e-15
Identity = 44/143 (30.77%), Postives = 80/143 (55.94%), Query Frame = 2
Query:   50 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            +L   QI E KEAFS+ D D DG ++  ++  +   LG+ P + EL  M+ E      G ++F  FL   + K+  TDSEE ++ AF +FD+ +N  ++   ++ ++ ++G     +E+    +EA V+G G+ +Y +F  ++
Sbjct:   11 KLPQKQIQEMKEAFSMIDVDRDGFVSKDDIKAISEQLGRTPDDKELTAMLKEAP----GPLNFTMFL---SDKLSGTDSEETIRNAFAMFDEQENKKLNIEYIKDLLEDMGNNFNKDEMRMTFKEAPVEG-GKFDYVKFTAMI 145          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CANB2_MOUSE (Calcineurin subunit B type 2 OS=Mus musculus GN=Ppp3r2 PE=2 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 6.346e-15
Identity = 50/152 (32.89%), Postives = 81/152 (53.29%), Query Frame = 2
Query:   38 KMADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            ++ +    ++I    ++F   D D  G ++ +E    +  L QNP    + D+    D DGNG +DF EF+   ++     D E++L+ AFR++D D +GFIS  EL  V+      NL +    + VD+ I   D DGDG+I++EEF  V+
Sbjct:   10 ELCNHFDQEEIRRLGKSFRKLDLDKSGSLSIEEFMR-LPELQQNPLVGRVIDIF---DTDGNGEVDFHEFIVGTSQFSVKGDEEQKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDWQLQQLVDKSILVLDKDGDGRISFEEFSDVV 157          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CANB1_DROME (Calcineurin subunit B type 1 OS=Drosophila melanogaster GN=CanB PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.288e-15
Identity = 51/151 (33.77%), Postives = 80/151 (52.98%), Query Frame = 2
Query:   41 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            M      D+I    + F   D D  G ++  E  + +  L QNP    +Q +I+  DADGNG +DF EF+  +++     D   +L+ AFR++D D +G+IS  EL  V+      NL +    + VD+ I  AD D DG+I+++EF  V+
Sbjct:   11 MCSNFDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDADGNGEVDFKEFIQGVSQFSVRGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTICFADKDEDGKISFDEFCSVV 157          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CML42_ARATH (Calcium-binding protein CML42 OS=Arabidopsis thaliana GN=CML42 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.082e-14
Identity = 55/179 (30.73%), Postives = 93/179 (51.96%), Query Frame = 2
Query:   26 NGRRKMADQLTDDQISE-------FKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT-------------------DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADVDGDGQINYEEFVKVM 478
            N ++K+A Q +  ++          +  F LFDK+GDG IT +EL   +  LG N   ++L+  +      GN  ++F +F +L  + + D+                   ++E +L EAF+VFD++ +GFISA EL+ V+  LG  E    E V++MI   D + DG++++ EF  +M
Sbjct:    6 NEKKKVARQSSSFRLRSPSLNALRLQRIFDLFDKNGDGFITVEELSQALTRLGLNADLSDLKSTVESYIQPGNTGLNFDDFSSL-HKTLDDSFFGGACGGGENEDDPSSAAENESDLAEAFKVFDENGDGFISARELQTVLKKLGLPEGGEMERVEKMIVSVDRNQDGRVDFFEFKNMM 183          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CML27_ORYSJ (Probable calcium-binding protein CML27 OS=Oryza sativa subsp. japonica GN=CML27 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.082e-14
Identity = 55/151 (36.42%), Postives = 77/151 (50.99%), Query Frame = 2
Query:   80 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAR---------------KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 481
            +  F LFD++GDG IT  E+ + + +LG     A L+  +      G   + F +F  L                  K  + D E ++KEAFRVFD+D +GFISAAEL+ V+  LG  E      V EMI   D D DG++++ EF K MM
Sbjct:   33 RRVFDLFDRNGDGEITLDEMASALDALGLGADRAGLEATVGGYIPAGAAGLRFGDFEALHRALGDALFGPVEEEEPGKQGEDDDEGDMKEAFRVFDEDGDGFISAAELQAVLKKLGLPEARNLATVQEMICNVDRDCDGRVDFGEF-KCMM 182          
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Match: CML24_ORYSJ (Probable calcium-binding protein CML24 OS=Oryza sativa subsp. japonica GN=CML24 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.414e-14
Identity = 56/151 (37.09%), Postives = 78/151 (51.66%), Query Frame = 2
Query:   80 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT---------------DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 481
            +  F LFD++GDG IT  EL   + +LG     A L   +     DG   + F +F +L  R + D                  +EE+KEAF+VFD D +GFISA+EL+ V+  LG  E  +   V EMI   D D DG++++ EF K MM
Sbjct:   41 RRVFDLFDRNGDGEITVDELAQALDALGLEADRAGLAATVGAHVPDGAAGLRFEDFESLH-RALGDALFGSLDVPEDGGGGGGGDEEMKEAFKVFDVDGDGFISASELQEVLKKLGMPEAGSLANVREMICNVDRDSDGRVDFGEF-KCMM 189          
The following BLAST results are available for this feature:
BLAST of BQ623619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 487
Match NameE-valueIdentityDescription
MLRA_PATYE2.848e-1530.77Myosin regulatory light chain A, smooth adductor m... [more]
CDPKB_ORYSJ2.848e-1532.43Calcium-dependent protein kinase isoform 11 OS=Ory... [more]
CANB2_DROME2.848e-1533.55Calcineurin subunit B type 2 OS=Drosophila melanog... [more]
CANB2_BOVIN2.848e-1532.89Calcineurin subunit B type 2 OS=Bos taurus GN=PPP3... [more]
MLR_PATSP3.720e-1530.77Myosin regulatory light chain OS=Patinopecten sp. ... [more]
CANB2_MOUSE6.346e-1532.89Calcineurin subunit B type 2 OS=Mus musculus GN=Pp... [more]
CANB1_DROME8.288e-1533.77Calcineurin subunit B type 1 OS=Drosophila melanog... [more]
CML42_ARATH1.082e-1430.73Calcium-binding protein CML42 OS=Arabidopsis thali... [more]
CML27_ORYSJ1.082e-1436.42Probable calcium-binding protein CML27 OS=Oryza sa... [more]
CML24_ORYSJ1.414e-1437.09Probable calcium-binding protein CML24 OS=Oryza sa... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00710 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00710 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623619 ID=BQ623619; Name=BQ623619; organism=Citrus sinensis; type=EST; length=567bp
TACCTATTTCTGAGTTGAAAAAACAAACGGAAGAAGAAAAATGGCGGATC
AGCTCACGGACGATCAGATCTCTGAGTTCAAAGAGGCCTTCAGCTTGTTT
GACAAGGATGGCGACGGTTGCATTACCACCAAGGAGCTTGGCACTGTTAT
GAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACATGATCA
ATGAAGTGGATGCTGATGGTAATGGAACTATTGATTTTCCTGAATTCCTA
AACCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGCTGAA
AGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCATCTCAGCTG
CTGAGCTGCGCCATGTGATGACAAACCTAGGAGAGAAACTTACTGATGAA
GAAGTTGATGAGATGATAAGGGAAGCTGATGTTGATGGTGATGGCCAGAT
AAATTATGAGGAATTTGTCAAGGTTATGATGGCCAAGTACTGACCCCACA
CCACCAATACTTATAAAATGGGTTGACTAAATTATAAAGGGATTCCTAGT
ATTTCTCTTTTACATTT
back to top