BQ623628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_PYRAE (30S ribosomal protein S5P OS=Pyrobaculum aerophilum GN=rps5p PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.115e-22 Identity = 55/128 (42.97%), Postives = 86/128 (67.19%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 KIR++++I+ ++ IKE +I+D L+ LK E++ + VQ+QT AG+R +F+A V VG+ DG+VG+G+ +++V AI A AKL+++PVRR G W PH+VP V GK GSV + ++P P Sbjct: 39 KIRTIDEIFANNYIIKEPEIVDILLPG-LKQELLNVNLVQRQTHAGERNQFQAVVAVGNEDGYVGVGIGKARQVRQAIEKATREAKLNLVPVRRGCGSWKCSCDEPHSVPFVVRGKSGSVEITLIPAP 165
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_METTH (30S ribosomal protein S5P OS=Methanobacterium thermoautotrophicum GN=rps5p PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.457e-22 Identity = 57/127 (44.88%), Postives = 83/127 (65.35%), Query Frame = 1 Query: 4 IRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 I S+++I+ PI E +IID L+ L++EV+ + VQ+ ++G++ F+ V VG+ DG+VGLG ++EV AIR A+ AK ++I VRRG WG GR HTVP KV+GK GSV V ++P P Sbjct: 25 ITSIDEIFEEGHPIMELEIIDALLPD-LEEEVIDVNLVQRMHKSGRKVNFRVIVAVGNKDGYVGLGQGKAREVGPAIRKAVDDAKFNIIKVRRGCGDWGCVCGREHTVPFKVSGKSGSVRVTLIPAP 150
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_SULTO (30S ribosomal protein S5P OS=Sulfolobus tokodaii GN=rps5p PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.902e-22 Identity = 58/128 (45.31%), Postives = 85/128 (66.41%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 KI S+++I+ + PI E +I+D L+ KLK EVM I VQKQT AG+ +++K +V+G+ DG+V G +K++ AI+ AI AK+++IPVRR G W G H++P KV GK GSV V ++P P Sbjct: 27 KITSMKEIFEKNYPITEPEIVDVLLP-KLKYEVMDIKIVQKQTDAGEISKYKVLIVMGNMDGYVSYGTGKAKQLRVAIQKAIKNAKMNIIPVRRGCGSWECTCGEAHSLPFKVYGKAGSVEVLLMPAP 153
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_AERPE (30S ribosomal protein S5P OS=Aeropyrum pernix GN=rps5p PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.238e-22 Identity = 61/128 (47.66%), Postives = 83/128 (64.84%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 KI+S+++I+ +LPI E +I+D L+ L EV+ + VQK T AG+ TRF+A VVVG+ DG+VGLG +++ AI AI AKL++IPVRR G W G H+VP V GK GSV V + P P Sbjct: 28 KIKSIDEIFRRNLPILETEIVDYLLPG-LDHEVIDVSIVQKMTDAGRITRFRAVVVVGNKDGYVGLGKGKARQFRFAIEKAIRNAKLNIIPVRRGCGSWECTCGEAHSVPFTVRGKSGSVEVILKPAP 154
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_ARCFU (30S ribosomal protein S5P OS=Archaeoglobus fulgidus GN=rps5p PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.441e-22 Identity = 54/128 (42.19%), Postives = 87/128 (67.97%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 KI+++++ +LP+KE +I+D L+ L+D+V++I VQ+ T +G+RT+F+ VVG+ +G+VG+G + +VA AI+ AI AKL++ V+R G W G H++P KVTG GSV V ++PGP Sbjct: 19 KIKTMDEALASNLPLKEPEIVDILLPD-LEDDVLEISMVQRMTDSGRRTKFRVTAVVGNRNGYVGIGTGKASQVAPAIQKAINNAKLNIFKVQRGCGSWECGCGGDHSLPFKVTGTSGSVRVTLIPGP 145
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_METS3 (30S ribosomal protein S5P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps5p PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.233e-21 Identity = 55/127 (43.31%), Postives = 82/127 (64.57%), Query Frame = 1 Query: 4 IRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 I +++I+ LPI E +I+D L+ L++EVM + VQ+ ++G++ F+ V VG+ +G+VGLG +KEV AIR A+ AK ++I VRRG WG G+ HTVP KV GK SV+V ++P P Sbjct: 23 ITDIDEIFEKGLPIMELEIVDALVPD-LEEEVMDVNLVQRMHKSGRKVNFRVIVAVGNKNGYVGLGQGKAKEVGPAIRKAVDNAKYNLIKVRRGCGDWGCVCGKEHTVPFKVQGKASSVSVSLMPAP 148
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_PYRFU (30S ribosomal protein S5P OS=Pyrococcus furiosus GN=rps5p PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.747e-21 Identity = 56/131 (42.75%), Postives = 79/131 (60.31%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTL---IGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 +I + +I+ IKE +IID L + + EV+ I + T +G+R RF+ VG+ DG+VGLG+ KEV AIR AI AKL++I ++R G W + RPH+VP V GK GSV VR++PGP Sbjct: 30 QITDIHEIFRRGYQIKEPEIIDVLLPEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNIIEIKRGCGSWECRCRRPHSVPFAVEGKEGSVRVRLIPGP 160
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_PICTO (30S ribosomal protein S5P OS=Picrophilus torridus GN=rps5p PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.747e-21 Identity = 56/128 (43.75%), Postives = 82/128 (64.06%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 +I+++ + LP+KEYQI+D LI LKDEV+ I Q+ T +G+R + VVG+ +G+VG+G +KE A AI+ AI AKL++I ++R G W G+PHT+P V GK GSV+V + P P Sbjct: 19 EIKTISEALHSKLPLKEYQIVDYLIPD-LKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAIDNAKLNIIEIKRGCGSWECGCGKPHTLPFLVNGKSGSVSVTLKPAP 145
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_METST (30S ribosomal protein S5P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps5p PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.747e-21 Identity = 55/128 (42.97%), Postives = 81/128 (63.28%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 +I ++QI LPI E +I+D L+ L++EVM + VQ+ ++G++ F+ V VG+ +G+VGLG S+EV AIR A+ AK ++I VRRG WG GR HTVP K+ GK SV+ ++P P Sbjct: 36 EITDIDQILDKGLPIMELEIVDALLPD-LEEEVMDVNLVQRMHKSGRKVNFRVIVAVGNRNGYVGLGQGKSQEVGPAIRKAVDAAKYNLIKVRRGCGDWGCGCGRRHTVPFKIEGKMSSVSATLIPAP 162
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_METBU (30S ribosomal protein S5P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps5p PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.747e-21 Identity = 56/128 (43.75%), Postives = 83/128 (64.84%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 ++ S+++ LPI+E +I+D L+ +L+DEV+ I VQ+ T +G+R +F+A V+VG+ DG VGLG +V AIR AI AK+++ ++R G W G PHTVP +V GK GSVTV + P P Sbjct: 23 QVTSMDEAMDSGLPIRESKIVDLLLP-ELEDEVLDINMVQRMTDSGRRVKFRATVIVGNGDGFVGLGQAKDVQVGPAIRKAIDNAKINITRIKRGCGSWECGCGLPHTVPSEVNGKAGSVTVVLKPAP 149 The following BLAST results are available for this feature:
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623628 ID=BQ623628; Name=BQ623628; organism=Citrus sinensis; type=EST; length=413bpback to top |