BQ623628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_IGNH4 (30S ribosomal protein S5P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps5p PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.588e-21 Identity = 58/128 (45.31%), Postives = 82/128 (64.06%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 KI S+ +++ +LPI E +I+D L+ LK EV+ + VQK T AG+ TR + VV+G+ DG VGLG+ +K++ AI+ A+ AKL++ PVRR G W G PH+VP V GK GSV V + P P Sbjct: 24 KITSIYELFEKNLPILEPEIVDYLVPD-LKHEVLDVSLVQKVTDAGRVTRLRVLVVIGNEDGLVGLGMGKAKQMRFAIQKALANAKLNITPVRRGCGSWECTCGEPHSVPFTVRGKSGSVEVILKPAP 150
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_UNCMA (30S ribosomal protein S5P OS=Uncultured methanogenic archaeon RC-I GN=rps5p PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.685e-21 Identity = 58/128 (45.31%), Postives = 81/128 (63.28%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 KI ++E+ + LPIKEYQI+D L+ L DEV+ I VQ+ T +G+R +F+ VVVG+ +G+VGL +V AIR AI AKL++I V R G W G HTVP +V G+ GS+ V ++P P Sbjct: 26 KITTMEEAFETGLPIKEYQIVDALLPD-LVDEVLDISMVQRMTDSGRRVKFRTTVVVGNGNGYVGLAQGKGVQVGPAIRKAIENAKLNIIKVARGCGSWECGCGLTHTVPSQVEGRAGSLKVVLMPAP 152
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_STAMF (30S ribosomal protein S5P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rps5p PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.685e-21 Identity = 57/128 (44.53%), Postives = 83/128 (64.84%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 KI SL++I+ +LP+ E +I+D L+ LK E + + VQK T AG+R+RF+ VVVG+ DG VG+G +++ A+R A+ AKL++ PVRR G W + G PH++P V GK GSV V + P P Sbjct: 28 KITSLKEIFDRNLPLLEPEIVDYLLPD-LKYERLDVGIVQKVTDAGRRSRFRVVVVVGNEDGFVGVGSGKARQYLVALRKALRNAKLNITPVRRGCGSWECRCGEPHSIPFTVQGKSGSVVVVLKPAP 154
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_METS5 (30S ribosomal protein S5P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps5p PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.685e-21 Identity = 58/128 (45.31%), Postives = 84/128 (65.62%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 KI S++++Y ++ I E +IID L+ + +K EV+ I VQKQT AG+ +R+K VV+G+ DG+V +GV SK++ AI+ AI AK+ VIPVRR G W G H++P V+GK GS V + P P Sbjct: 27 KITSIKELYARNMSIAEPEIIDVLLPN-MKYEVIDIGMVQKQTDAGELSRYKVLVVMGNYDGYVSIGVGKSKQLRVAIQKAIRDAKMHVIPVRRGCGSWECTCGESHSLPFLVSGKSGSAEVVLRPAP 153
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_SULAC (30S ribosomal protein S5P OS=Sulfolobus acidocaldarius GN=rps5p PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.119e-21 Identity = 53/128 (41.41%), Postives = 85/128 (66.41%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 KI S+++++ +LPI E +I+D L+ KL+ +++ I VQKQT AG+ +R+K +V+G+ DG++ G +K++ AI+ AI AK+ +IPVRR G W G H++P V+GK GSV V ++P P Sbjct: 27 KINSMKELFERNLPIVEPEIVDVLLP-KLRYDIVDIGIVQKQTDAGELSRYKVLIVMGNMDGYISYGTGKAKQLRVAIQKAIRDAKMRIIPVRRGCGSWECTCGESHSLPFIVSGKAGSVEVTLLPAP 153
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_PYRHO (30S ribosomal protein S5P OS=Pyrococcus horikoshii GN=rps5p PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.044e-20 Identity = 54/131 (41.22%), Postives = 79/131 (60.31%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTL---IGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 +I + +I+ IKE +IID L + + E++ I + T +G+R RF+ VG+ DG+VGLG+ +EV AIR AI AKL++I ++R G W + RPH+VP V GK GSV VR++PGP Sbjct: 30 QITDIHEIFRRGYQIKEPEIIDVLLPEVNARENQEIIDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGREVGIAIRKAINYAKLNIIEIKRGCGSWECRCRRPHSVPFAVEGKEGSVRVRLIPGP 160
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_METJA (30S ribosomal protein S5P OS=Methanocaldococcus jannaschii GN=rps5p PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.363e-20 Identity = 53/128 (41.41%), Postives = 84/128 (65.62%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 +I ++ I ++LPI E +I+D L+ L+++V+ + VQ+ ++G+R RF+A VVVG+ +G+VG+G +KEV AIR AI AK ++I V+R G W G PH++P K GKCGS + ++P P Sbjct: 22 QITDIDYILDNNLPILEPEIVDALLPD-LEEKVLDVKLVQRMHKSGRRARFRATVVVGNRNGYVGVGKGKAKEVGPAIRKAIAQAKKNIIRVKRGCGSWECGCGTPHSIPYKGYGKCGSTAIEILPAP 148
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_METHJ (30S ribosomal protein S5P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps5p PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.363e-20 Identity = 53/128 (41.41%), Postives = 80/128 (62.50%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 +I+S+++I PIKE +I+D + L DEV+ I VQ+ T +G+R +F+A VVVG+ DG++G G +V AI+ AI+ AK++++ VRR G W PH++P VTG GSV V + P P Sbjct: 22 EIKSIDEILSSGKPIKEPEIVDAFLPD-LVDEVLDINMVQRMTDSGRRVKFRAVVVVGNRDGYIGFGQGKDAQVGDAIKKAIVSAKINLVKVRRGCGSWECGCSNPHSIPMLVTGDAGSVRVTLRPAP 148
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_PYRAB (30S ribosomal protein S5P OS=Pyrococcus abyssi GN=rps5p PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.325e-20 Identity = 53/131 (40.46%), Postives = 79/131 (60.31%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTL---IGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 +I + +I+ IKE +IID L + + E++ I + T +G+R RF+ VG+ DG+VGLG+ +EV AIR AI AKL++I ++R G W + RPH+VP V GK GSV V+++PGP Sbjct: 30 QITDIHEIFRKGYQIKEPEIIDVLLPEVNARENQEILDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGREVGIAIRKAINYAKLNIIEIKRGCGSWECRCRRPHSVPFTVEGKEGSVRVKLIPGP 160
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_METTP (30S ribosomal protein S5P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps5p PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.325e-20 Identity = 53/128 (41.41%), Postives = 81/128 (63.28%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 ++ + E+ LPIKE+QIID L+ L+DEV+ I VQ+ T +G+R +F+ V+VG+ DG++G+G +V AI+ I AKL+V+ + R G W G+ HTVP KV+G GSV + ++P P Sbjct: 24 QVTTFEEAVRSGLPIKEHQIIDLLLPG-LEDEVLDITMVQRMTDSGRRVKFRTTVIVGNRDGYIGIGHGKDVQVGGAIKKGIENAKLNVVRINRGCGSWECGCGQAHTVPYKVSGSSGSVRIYLMPAP 150 The following BLAST results are available for this feature:
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623628 ID=BQ623628; Name=BQ623628; organism=Citrus sinensis; type=EST; length=413bpback to top |