BQ623671
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623671 vs. ExPASy Swiss-Prot
Match: DXS_SYNS9 (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain CC9902) GN=dxs PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.992e-13 Identity = 42/112 (37.50%), Postives = 67/112 (59.82%), Query Frame = 2 Query: 134 LPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYA 469 LPIG+ ++ REG D+ I A+ +V +++ A +L G+SA VIN R +RPLD++ I+ R+ R+VT+EEG G GA + S+ + ++ PV RI D + +A Sbjct: 493 LPIGRGELLREGNDLVIVAYGSMVAPAMETAALLEASGLSASVINARFLRPLDQALIHPLARRVPRVVTMEEGTLSGGFGAAVLESLNDHD---INVPVLRIGIPDQLVDHA 601
BLAST of BQ623671 vs. ExPASy Swiss-Prot
Match: DXS_SYNP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=dxs PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.601e-13 Identity = 46/135 (34.07%), Postives = 73/135 (54.07%), Query Frame = 2 Query: 134 LPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAV-----PQVEDIVRAA 523 LPIGK +I R G D+ + + +V +L+ AEIL++ GISA VIN R ++PLD I ++ ++ T EEG G G+ +C ++ + + PV+R DV + +A E A Q+ + +RAA Sbjct: 494 LPIGKGEILRNGDDILLIGYGAMVHSTLQVAEILSEHGISATVINARFVKPLDSELIAPLAKQIGKVATFEEGCLMGGFGSAVCEALQDHD---VLVPVKRFGIGDVLVDHATPAESKAAHGLTPAQMAESIRAA 625
BLAST of BQ623671 vs. ExPASy Swiss-Prot
Match: DXS_SYNJB (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. GN=dxs PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.601e-13 Identity = 46/119 (38.66%), Postives = 69/119 (57.98%), Query Frame = 2 Query: 134 LPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMA 490 LPIGKA++ R G +V I A+ +V SL+AAEIL + GISA V+N R +PLD I ++ +VTVEEG G G+ + ++++ L P+ R+ DV + +A E +A Sbjct: 499 LPIGKAEVLRSGGEVLILAYGSMVHPSLQAAEILKEHGISATVVNARFAKPLDTELILPLAEQSRLVVTVEEGCLMGGFGSAVAEALLDAD---LAVPLLRLGVPDVWVEHATPEESLA 614
BLAST of BQ623671 vs. ExPASy Swiss-Prot
Match: DXS_SYNPX (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain WH8102) GN=dxs PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.437e-13 Identity = 48/134 (35.82%), Postives = 72/134 (53.73%), Query Frame = 2 Query: 134 LPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGAD------VPMPYAANLERMAVPQVEDIVR 517 LPIG+ ++ REG D+ I A+ +V +L A +L + G+S VIN R +RPLD++ I+ R+ R+VT+EEG G GA + S+ ++ S P+ RI D P +LE + V E I R Sbjct: 493 LPIGRGELLREGDDLLIVAYGSMVHPALDTATLLEEAGLSTTVINARFLRPLDQALIHPLARRIRRVVTMEEGALAGGFGAAVLESLSDQDIS---IPLLRIGIPDKMVDHATPQQSKESLEMIPVQMAERIRR 623
BLAST of BQ623671 vs. ExPASy Swiss-Prot
Match: DXS_HELMI (1-deoxy-D-xylulose-5-phosphate synthase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=dxs PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.437e-13 Identity = 37/83 (44.58%), Postives = 55/83 (66.27%), Query Frame = 2 Query: 134 LPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEI 382 +PIG+ ++ R+G DVTI A +VG++ +AA++L EGI A V+N R ++PLD+ I R+T R+VTVEE G G+ I Sbjct: 489 VPIGRGELLRQGSDVTIVAIGAMVGIAEEAADLLEAEGIRAAVVNARFVKPLDKELIIKQARETGRIVTVEEHVLAGGFGSAI 571
BLAST of BQ623671 vs. ExPASy Swiss-Prot
Match: DXS_DESHY (1-deoxy-D-xylulose-5-phosphate synthase OS=Desulfitobacterium hafniense (strain Y51) GN=dxs PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.437e-13 Identity = 50/143 (34.97%), Postives = 75/143 (52.45%), Query Frame = 2 Query: 11 DARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERI 439 + R +L +++ PV L Y S E+ + LP+GKA+I +EGKD+T+ +V L AA L G+ A VINLR I PLDR +I R T R++TVE+ G+G+ + + +E + D VER+ Sbjct: 452 ELRHMLYTSLQLDGPVA-----LRYPRSVGQGVELTEELRELPVGKAEILQEGKDITLIGVGPMVYTCLAAAVELRHRGVEATVINLRYINPLDRESILRYARMTKRIITVEDHMLAGGMGSAVMEVLGDEGLT--DVVVERL 587
BLAST of BQ623671 vs. ExPASy Swiss-Prot
Match: DXS_DESHD (1-deoxy-D-xylulose-5-phosphate synthase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=dxs PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.437e-13 Identity = 50/143 (34.97%), Postives = 75/143 (52.45%), Query Frame = 2 Query: 11 DARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERI 439 + R +L +++ PV L Y S E+ + LP+GKA+I +EGKD+T+ +V L AA L G+ A VINLR I PLDR +I R T R++TVE+ G+G+ + + +E + D VER+ Sbjct: 452 ELRHMLYTSLQLDGPVA-----LRYPRSVGQGVELTEELRELPVGKAEILQEGKDITLIGVGPMVYTCLAAAVELRHRGVEATVINLRYINPLDRESILRYARMTKRIITVEDHMLAGGMGSAVMEVLGDEGLT--DVVVERL 587
BLAST of BQ623671 vs. ExPASy Swiss-Prot
Match: DXS_ANAVT (1-deoxy-D-xylulose-5-phosphate synthase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=dxs PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.437e-13 Identity = 46/119 (38.66%), Postives = 68/119 (57.14%), Query Frame = 2 Query: 134 LPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMA 490 L IGK +I R G DV I + +V S++AAEIL++ GI A VIN R ++PLD I +K R+VT+EEG G G+ + ++++ + PV+RI DV + +A E A Sbjct: 494 LEIGKGEILRNGDDVLIIGYGTMVYPSMQAAEILSEHGIEATVINARFVKPLDTELIVPLAQKIGRVVTLEEGCVMGGFGSAVAEALLDAD---VVVPVKRIGIPDVLVEHATPDESKA 609
BLAST of BQ623671 vs. ExPASy Swiss-Prot
Match: DXS_ANASP (1-deoxy-D-xylulose-5-phosphate synthase OS=Anabaena sp. (strain PCC 7120) GN=dxs PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.437e-13 Identity = 46/119 (38.66%), Postives = 68/119 (57.14%), Query Frame = 2 Query: 134 LPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMA 490 L IGK +I R G DV I + +V S++AAEIL++ GI A VIN R ++PLD I +K R+VT+EEG G G+ + ++++ + PV+RI DV + +A E A Sbjct: 494 LEIGKGEILRNGDDVLIIGYGTMVYPSMQAAEILSEHGIEATVINARFVKPLDTELIVPLAQKIGRVVTLEEGCVMGGFGSAVAEALLDAD---VVVPVKRIGIPDVLVEHATPDESKA 609
BLAST of BQ623671 vs. ExPASy Swiss-Prot
Match: DXS_SYNSC (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain CC9605) GN=dxs PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.885e-13 Identity = 40/109 (36.70%), Postives = 65/109 (59.63%), Query Frame = 2 Query: 86 GESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFS 412 GE P+ E ++ LPIG+ ++ REG D+ I A+ +V +L A +L + G+S VIN R +RPLD++ I+ R+ R+VT+EEG G GA + S+ ++ + Sbjct: 480 GEGVPLMEEGWET---LPIGRGELLREGDDLMIVAYGSMVAPALATATLLEEAGLSTTVINARFLRPLDQALIHPLARRIPRVVTMEEGALPGGFGAAVLESLTDQDIN 585 The following BLAST results are available for this feature:
BLAST of BQ623671 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623671 ID=BQ623671; Name=BQ623671; organism=Citrus sinensis; type=EST; length=741bpback to top |