BQ623733
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623733 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.189e-13 Identity = 51/141 (36.17%), Postives = 71/141 (50.35%), Query Frame = 3 Query: 6 WFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 401 WF+ G I G +Y +P ++ ++ LMG E R G +G + Y GGS DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHL+DPVNNN Sbjct: 133 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG----GPLGE---VVDPLYPGGSFDPL----------GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNN 256
BLAST of BQ623733 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.189e-13 Identity = 51/142 (35.92%), Postives = 72/142 (50.70%), Query Frame = 3 Query: 6 WFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEK-YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 401 WF+ G I G +Y +P ++ ++ LMG E R G +G G +K Y GG+ DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH+ADPV NN Sbjct: 130 WFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYR----VGGGPLGE----GLDKIYPGGAFDPL----------GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 253
BLAST of BQ623733 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.189e-13 Identity = 51/141 (36.17%), Postives = 70/141 (49.65%), Query Frame = 3 Query: 6 WFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 401 WF+ G I G +Y +P ++ ++ LMG E R G +G Y GGS DP D ++ + ++KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN Sbjct: 131 WFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG----GPLGEVID---PLYPGGSFDPL----------GLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
BLAST of BQ623733 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.859e-13 Identity = 51/141 (36.17%), Postives = 69/141 (48.94%), Query Frame = 3 Query: 6 WFQTGV-IPPAGTYNYWADPY--------TLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 401 WF+ G I G +Y P ++ ++ LMG E R G +G + Y GG+ DP D + + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN Sbjct: 143 WFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAG----GPLGE---VTDPIYPGGNFDPL----------GLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 266
BLAST of BQ623733 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.859e-13 Identity = 51/141 (36.17%), Postives = 71/141 (50.35%), Query Frame = 3 Query: 6 WFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 401 WF+ G I G +Y +P ++ ++ LMG E R G +G + Y GGS DP D ++ + K+KE+K GRLAML++ G+FVQ +VTG GP +NL DH+ADPVNNN Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG----GPLGE---VVDPLYPGGSFDPL----------GLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVNNN 253
BLAST of BQ623733 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.859e-13 Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 3 Query: 177 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 401 Y GGS DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLA+PVNNN Sbjct: 169 YPGGSFDPL----------ALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNNN 233
BLAST of BQ623733 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.859e-13 Identity = 51/142 (35.92%), Postives = 72/142 (50.70%), Query Frame = 3 Query: 6 WFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYL-GGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 401 WF+ G I G +Y +P ++ ++ LMG E R G++G G + L GG+ DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPV NN Sbjct: 131 WFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYR----VGGGTLGE----GLDPLLPGGAFDPL----------GLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANN 254
BLAST of BQ623733 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.734e-13 Identity = 50/142 (35.21%), Postives = 71/142 (50.00%), Query Frame = 3 Query: 6 WFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEK-YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 401 WF+ G I G +Y +P ++ ++ LMG E R G +G G + Y GG+ DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH+ADPV NN Sbjct: 129 WFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYR----VGGGPLGE----GLDPLYPGGAFDPL----------GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVANN 252
BLAST of BQ623733 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.877e-13 Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = 3 Query: 177 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 401 Y GGS DP +D ++ + K+KE KNGRLAM ++ G+F+Q +VTG GP +NL DHL DPVNNN Sbjct: 191 YPGGSFDPL----------GLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVNNN 255
BLAST of BQ623733 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.370e-13 Identity = 51/141 (36.17%), Postives = 70/141 (49.65%), Query Frame = 3 Query: 6 WFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 401 WF+ G I G +Y +P ++ ++ LMG E R G +G + Y GGS DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLA PVNNN Sbjct: 128 WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAG----GPLGE---VTDPIYPGGSFDPL----------GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNN 251 The following BLAST results are available for this feature:
BLAST of BQ623733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623733 ID=BQ623733; Name=BQ623733; organism=Citrus sinensis; type=EST; length=587bpback to top |