BQ623746 | Citrus Genome Database

Overview


Name	BQ623746
Unique Name	BQ623746
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	587

Libraries


Library Name	Type
Ridge pineapple sweet orange entire seedling	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of BQ623746 vs. ExPASy Swiss-Prot
Match: METK_COXBR (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=metK PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.179e-26
Identity = 45/85 (52.94%), Postives = 60/85 (70.59%), Query Frame = 3

Query:  123 GFARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 377
            G A RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE FD RPG +   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  291 GLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372

HSP 2 Score: 43.5134 bits (101), Expect = 4.179e-26
Identity = 22/45 (48.89%), Postives = 25/45 (55.56%), Query Frame = 2

Query:    2 DTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLCSQ 136
            DTY             KDP+KVDRSGAY  R  AK+IVA GL  +
Sbjct:  251 DTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADR 295

[Close]

BLAST of BQ623746 vs. ExPASy Swiss-Prot
Match: METK_COXB2 (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain CbuG_Q212) GN=metK PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.179e-26
Identity = 45/85 (52.94%), Postives = 60/85 (70.59%), Query Frame = 3

Query:  123 GFARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 377
            G A RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE FD RPG +   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  291 GLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372

HSP 2 Score: 43.5134 bits (101), Expect = 4.179e-26
Identity = 22/45 (48.89%), Postives = 25/45 (55.56%), Query Frame = 2

Query:    2 DTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLCSQ 136
            DTY             KDP+KVDRSGAY  R  AK+IVA GL  +
Sbjct:  251 DTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADR 295

[Close]

BLAST of BQ623746 vs. ExPASy Swiss-Prot
Match: METK_COXB1 (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain CbuK_Q154) GN=metK PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.179e-26
Identity = 45/85 (52.94%), Postives = 60/85 (70.59%), Query Frame = 3

Query:  123 GFARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 377
            G A RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE FD RPG +   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  291 GLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372

HSP 2 Score: 43.5134 bits (101), Expect = 4.179e-26
Identity = 22/45 (48.89%), Postives = 25/45 (55.56%), Query Frame = 2

Query:    2 DTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLCSQ 136
            DTY             KDP+KVDRSGAY  R  AK+IVA GL  +
Sbjct:  251 DTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADR 295

[Close]

BLAST of BQ623746 vs. ExPASy Swiss-Prot
Match: METK_CELJU (S-adenosylmethionine synthetase OS=Cellvibrio japonicus (strain Ueda107) GN=metK PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.181e-26
Identity = 48/85 (56.47%), Postives = 64/85 (75.29%), Query Frame = 3

Query:  123 GFARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 377
            G A +C +QVSYAIGV EP S+ ++++GTGK+PD EI+K+V+E FD RP  +   L+LKR     + +TAAYGHFGR+ PDFTWE
Sbjct:  291 GLADKCEIQVSYAIGVAEPTSISINTFGTGKLPDAEIIKLVREHFDLRPRGLIEMLNLKR---PIYRQTAAYGHFGRELPDFTWE 372

HSP 2 Score: 37.7354 bits (86), Expect = 4.181e-26
Identity = 20/45 (44.44%), Postives = 24/45 (53.33%), Query Frame = 2

Query:    2 DTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLCSQ 136
            D+Y             KDP+KVDRS AY  R  AK+IVA GL  +
Sbjct:  251 DSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADK 295

[Close]

BLAST of BQ623746 vs. ExPASy Swiss-Prot
Match: METK_THIDA (S-adenosylmethionine synthetase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=metK PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 5.441e-26
Identity = 46/86 (53.49%), Postives = 65/86 (75.58%), Query Frame = 3

Query:  123 GFARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEV 380
            G A +C+VQVSYAIGV +P S+ VD++GTGKIP+ +I+++++  FD RP  +   LDL R     + +TA+YGHFGRD+P+FTWEV
Sbjct:  293 GLADKCMVQVSYAIGVAKPTSLMVDTFGTGKIPEAKIVELIQAHFDLRPKGIVNMLDLLR---PIYTRTASYGHFGRDEPEFTWEV 375

HSP 2 Score: 39.2762 bits (90), Expect = 5.441e-26
Identity = 21/45 (46.67%), Postives = 24/45 (53.33%), Query Frame = 2

Query:    2 DTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLCSQ 136
            DTY             KDP+KVDRS AY  R  AK+IVA GL  +
Sbjct:  253 DTYGGASPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADK 297

[Close]

BLAST of BQ623746 vs. ExPASy Swiss-Prot
Match: METK_GEOSL (S-adenosylmethionine synthetase OS=Geobacter sulfurreducens GN=metK PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.441e-26
Identity = 49/85 (57.65%), Postives = 59/85 (69.41%), Query Frame = 3

Query:  123 GFARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 377
            G   RC VQV+YAIGV EP+SV VD+ GTGKIP   I +I++E FD RP  +   LDL R     + KTAAYGHFGR+ P+FTWE
Sbjct:  294 GLCERCEVQVAYAIGVAEPVSVMVDTAGTGKIPSARIAEIIREVFDLRPRAIIEQLDLLR---PIYRKTAAYGHFGRELPEFTWE 375

HSP 2 Score: 41.2022 bits (95), Expect = 5.441e-26
Identity = 20/45 (44.44%), Postives = 26/45 (57.78%), Query Frame = 2

Query:    2 DTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLCSQ 136
            D+Y             KDP+KVDRS AY+ R  AK++VA GLC +
Sbjct:  254 DSYGGHGAHGGGAFSGKDPSKVDRSAAYMGRYVAKNLVAAGLCER 298

[Close]

BLAST of BQ623746 vs. ExPASy Swiss-Prot
Match: METK_ACACA (S-adenosylmethionine synthetase OS=Acanthamoeba castellanii GN=metK PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.441e-26
Identity = 52/94 (55.32%), Postives = 64/94 (68.09%), Query Frame = 3

Query:  123 GFARRCIVQVSYAIGVPEPLSVFVDSYGT--GKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW 398
            G A R +VQVSYAIGV  PLSVFVDSYGT  G   D+++L I K +FD RPG +  +L L+R     + KTA +GHFGR+DPDF WE  K L +
Sbjct:  298 GLANRALVQVSYAIGVSHPLSVFVDSYGTAQGGRTDEDLLAISKSNFDLRPGKIINDLQLRR---PIYEKTAYHGHFGRNDPDFLWEAPKKLNF 388

HSP 2 Score: 41.2022 bits (95), Expect = 5.441e-26
Identity = 21/45 (46.67%), Postives = 25/45 (55.56%), Query Frame = 2

Query:    2 DTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLCSQ 136
            DTY             KDP+KVDRS AY  R  AKS+VA GL ++
Sbjct:  258 DTYGGWGAHGGGAFSGKDPSKVDRSAAYAARWIAKSLVARGLANR 302

[Close]

BLAST of BQ623746 vs. ExPASy Swiss-Prot
Match: METK_LARHH (S-adenosylmethionine synthetase OS=Laribacter hongkongensis (strain HLHK9) GN=metK PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.082e-26
Identity = 46/85 (54.12%), Postives = 63/85 (74.12%), Query Frame = 3

Query:  123 GFARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 377
            G AR+C +QVSYAIG+ EP S+ VD++GT  IP+++I+++VK  FD RP  +   LDL R     + KTAAYGHFGR++P+FTWE
Sbjct:  294 GLARQCQIQVSYAIGIAEPTSISVDTFGTNAIPNEKIVELVKRHFDLRPKGIIQMLDLLR---PIYTKTAAYGHFGREEPEFTWE 375

HSP 2 Score: 40.4318 bits (93), Expect = 7.082e-26
Identity = 22/45 (48.89%), Postives = 24/45 (53.33%), Query Frame = 2

Query:    2 DTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLCSQ 136
            DTY             KDP+KVDRS AY  R  AK+IVA GL  Q
Sbjct:  254 DTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLARQ 298

[Close]

BLAST of BQ623746 vs. ExPASy Swiss-Prot
Match: METK_METFK (S-adenosylmethionine synthetase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=metK PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 7.082e-26
Identity = 47/85 (55.29%), Postives = 62/85 (72.94%), Query Frame = 3

Query:  123 GFARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 377
            G A RC+VQVSYAIGV +P SV V++YGTGK+ ++ + ++V + FD RP  +   LDL R     + KTAAYGHFGRD+P+FTWE
Sbjct:  292 GLASRCLVQVSYAIGVAKPTSVMVETYGTGKVSNEILTQLVLDHFDLRPKGIVKMLDLLR---PIYAKTAAYGHFGRDEPEFTWE 373

HSP 2 Score: 40.817 bits (94), Expect = 7.082e-26
Identity = 22/45 (48.89%), Postives = 25/45 (55.56%), Query Frame = 2

Query:    2 DTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLCSQ 136
            DTY             KDP+KVDRS AY  R  AK+IVA GL S+
Sbjct:  252 DTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASR 296

[Close]

BLAST of BQ623746 vs. ExPASy Swiss-Prot
Match: METK_BORPE (S-adenosylmethionine synthetase OS=Bordetella pertussis GN=metK PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 7.082e-26
Identity = 48/85 (56.47%), Postives = 62/85 (72.94%), Query Frame = 3

Query:  123 GFARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 377
            G AR+C VQVSYAIGV EP+++ V + GTG IPD++I K+V+E FD RP  +   LDL R     + KTAAYGHFGR +P+F+WE
Sbjct:  294 GLARQCQVQVSYAIGVAEPINITVYTEGTGVIPDEQIAKLVREHFDLRPKGIVNMLDLLR---PIYTKTAAYGHFGRSEPEFSWE 375

HSP 2 Score: 41.2022 bits (95), Expect = 7.082e-26
Identity = 21/45 (46.67%), Postives = 24/45 (53.33%), Query Frame = 2

Query:    2 DTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLCSQ 136
            DTY             KDP+KVDRS AY  R  AK++VA GL  Q
Sbjct:  254 DTYGGACPHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLARQ 298

The following BLAST results are available for this feature:

BLAST of BQ623746 vs. ExPASy Swiss-Prot

BLAST of BQ623746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
METK_COXBR	4.179e-26	52.94	S-adenosylmethionine synthetase OS=Coxiella burnet...	[more]
METK_COXB2	4.179e-26	52.94	S-adenosylmethionine synthetase OS=Coxiella burnet...	[more]
METK_COXB1	4.179e-26	52.94	S-adenosylmethionine synthetase OS=Coxiella burnet...	[more]
METK_CELJU	4.181e-26	56.47	S-adenosylmethionine synthetase OS=Cellvibrio japo...	[more]
METK_THIDA	5.441e-26	53.49	S-adenosylmethionine synthetase OS=Thiobacillus de...	[more]
METK_GEOSL	5.441e-26	57.65	S-adenosylmethionine synthetase OS=Geobacter sulfu...	[more]
METK_ACACA	5.441e-26	55.32	S-adenosylmethionine synthetase OS=Acanthamoeba ca...	[more]
METK_LARHH	7.082e-26	54.12	S-adenosylmethionine synthetase OS=Laribacter hong...	[more]
METK_METFK	7.082e-26	55.29	S-adenosylmethionine synthetase OS=Methylobacillus...	[more]
METK_BORPE	7.082e-26	56.47	S-adenosylmethionine synthetase OS=Bordetella pert...	[more]

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Properties


Property Name	Value
Genbank description	USDA-FP_00837 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00837 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>BQ623746 ID=BQ623746; Name=BQ623746; organism=Citrus sinensis; type=EST; length=587bp
GGACACTTATGGTGGCTGGGGAGCCCATGGTGGCGGTGCTTTCTCTGGAA
AAGACCCTACTAAGGTGGATAGGAGTGGTGCATACATTGTTAGGCAGGCT
GCTAAGAGCATTGTTGCAAACGGGCTTTGCTCGCAGGTGCATTGTCCAAG
TCTCCTATGCCATTGGTGTGCCTGAGCCATTGTCTGTTTTTGTGGACTCA
TATGGAACCGGCAAGATTCCTGACAAGGAGATCCTCAAAATTGTGAAGGA
AAGCTTTGATTTCAGGCCAGGAATGATGACCATCAATTTGGATCTCAAAA
GGGGCGGTAATGGCAGGTTCTTGAAGACTGCTGCCTATGGACACTTTGGC
AGGGATGACCCAGACTTCACTTGGGAAGTTGTGAAGCCCCTCAAGTGGGA
AAAGCCTCAAGCTTAAATTTGAGTTGAAAAGTGAAAACTATCCCTGCTGT
TCAAGTTTGCTTCTATTGGTAGTGGATGAATAATTTGAATATTATCTTGC
TGCTGCTTTGTAATACTAAGCAAATCTCCTGGGTTCAAAACTCATACATG
TTCCCCATTCAATTCCCTTTCTTATTCTTCTTTCCCC