BQ623748

Overview
NameBQ623748
Unique NameBQ623748
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length512
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BQ623748 vs. ExPASy Swiss-Prot
Match: EF1A2_SCHPO (Elongation factor 1-alpha-B/C OS=Schizosaccharomyces pombe GN=tef1b PE=1 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 2.433e-70
Identity = 123/170 (72.35%), Postives = 149/170 (87.65%), Query Frame = 1 
Query:    1 GVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIK 510
            GV+KPGM+VTF P+G+TTEVKSVEMHHE+L   LPGDNVGFNVKNV+VKD++RG V  +SK+DP    A+FT+QVII+NHPGQI  GY+PVLDCHT+HIA KF+EL+ KIDRRSGK++E+ PKF+K+GDA + KM+P+KPM VE F+DY PLGRFAVRDMRQTVAVGVIK
Sbjct:  268 GVIKPGMIVTFAPAGVTTEVKSVEMHHESLDAGLPGDNVGFNVKNVSVKDIRRGNVCGDSKNDPPMGCASFTAQVIILNHPGQISAGYSPVLDCHTAHIACKFAELIEKIDRRSGKKIEESPKFVKSGDACIAKMVPSKPMCVEAFTDYAPLGRFAVRDMRQTVAVGVIK 437
[Close]
BLAST of BQ623748 vs. ExPASy Swiss-Prot
Match: EF1A1_SCHPO (Elongation factor 1-alpha-A OS=Schizosaccharomyces pombe GN=tef1a PE=1 SV=2)

HSP 1 Score: 264.233 bits (674), Expect = 2.433e-70
Identity = 123/170 (72.35%), Postives = 149/170 (87.65%), Query Frame = 1 
Query:    1 GVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIK 510
            GV+KPGM+VTF P+G+TTEVKSVEMHHE+L   LPGDNVGFNVKNV+VKD++RG V  +SK+DP    A+FT+QVII+NHPGQI  GY+PVLDCHT+HIA KF+EL+ KIDRRSGK++E+ PKF+K+GDA + KM+P+KPM VE F+DY PLGRFAVRDMRQTVAVGVIK
Sbjct:  268 GVIKPGMIVTFAPAGVTTEVKSVEMHHESLDAGLPGDNVGFNVKNVSVKDIRRGNVCGDSKNDPPMGCASFTAQVIILNHPGQISAGYSPVLDCHTAHIACKFAELIEKIDRRSGKKIEESPKFVKSGDACIAKMVPSKPMCVEAFTDYAPLGRFAVRDMRQTVAVGVIK 437
[Close]
BLAST of BQ623748 vs. ExPASy Swiss-Prot
Match: EF1A_STYLE (Elongation factor 1-alpha OS=Stylonychia lemnae GN=EFAA PE=3 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 3.178e-70
Identity = 121/170 (71.18%), Postives = 149/170 (87.65%), Query Frame = 1 
Query:    1 GVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIK 510
            G+LKPGMV+TF P  +TTE KSVEMHHE+L EA PGDNVGF VKN++VKDL+RG+VAS+SK+DPA++  NF +QVI++NHPGQI  GYAPVLDCHT+HIA KF E+ +K+DRRSGK LE+EPKF+K+G+A +V+M+P KPM VE F+ YPPLGRFAVRDM+QTVAVGVIK
Sbjct:  258 GLLKPGMVLTFAPMNITTECKSVEMHHESLTEAEPGDNVGFTVKNLSVKDLRRGYVASDSKNDPAKDTTNFLAQVIVLNHPGQIQKGYAPVLDCHTAHIACKFDEIESKVDRRSGKVLEEEPKFIKSGEAALVRMVPQKPMCVEAFNQYPPLGRFAVRDMKQTVAVGVIK 427
[Close]
BLAST of BQ623748 vs. ExPASy Swiss-Prot
Match: EF1A_ARTSA (Elongation factor 1-alpha OS=Artemia salina PE=1 SV=2)

HSP 1 Score: 263.848 bits (673), Expect = 3.178e-70
Identity = 119/170 (70.00%), Postives = 151/170 (88.82%), Query Frame = 1 
Query:    1 GVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIK 510
            G++KPGM+VTF P+ +TTEVKSVEMHHE+L++A PGDNVGFNVKNV+VK+L+RG+VAS+SK++PAR + +F +QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K DRR+GK  E EPKF+K+GDA M+ ++P+KP+ VE FSD+PPLGRFAVRDMRQTVAVGVIK
Sbjct:  270 GIIKPGMIVTFAPANITTEVKSVEMHHESLEQASPGDNVGFNVKNVSVKELRRGYVASDSKNNPARGSQDFFAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEAEPKFIKSGDAAMITLVPSKPLCVEAFSDFPPLGRFAVRDMRQTVAVGVIK 439
[Close]
BLAST of BQ623748 vs. ExPASy Swiss-Prot
Match: EF1A1_DROME (Elongation factor 1-alpha 1 OS=Drosophila melanogaster GN=Ef1alpha48D PE=1 SV=2)

HSP 1 Score: 263.462 bits (672), Expect = 4.151e-70
Identity = 121/170 (71.18%), Postives = 149/170 (87.65%), Query Frame = 1 
Query:    1 GVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIK 510
            GVLKPG VV F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RG+VA +SK +P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRRSGK  E+ PKF+K+GDA +V ++P+KP+ VE F ++PPLGRFAVRDMRQTVAVGVIK
Sbjct:  270 GVLKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKANPPKGAADFTAQVIVLNHPGQIANGYTPVLDCHTAHIACKFAEIKEKVDRRSGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLGRFAVRDMRQTVAVGVIK 439
[Close]
BLAST of BQ623748 vs. ExPASy Swiss-Prot
Match: EF1A_COCIM (Elongation factor 1-alpha OS=Coccidioides immitis GN=TEF PE=2 SV=2)

HSP 1 Score: 263.077 bits (671), Expect = 5.421e-70
Identity = 122/170 (71.76%), Postives = 148/170 (87.06%), Query Frame = 1 
Query:    1 GVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIK 510
            GV+KPGMVVTF PS +TTEVKSVEMHH+ L +  PGDNVGFNVKNV+VK+++RG VA +SK+DP +   +F +QVI++NHPGQ+G GYAPVLDCHT+HIA KFSEL+ KIDRR+GK +E  PKF+K+GDA +VKM+P+KPM VE F+DYPPLGRFAVRDMRQTVAVGVIK
Sbjct:  269 GVIKPGMVVTFAPSNVTTEVKSVEMHHQQLTQGNPGDNVGFNVKNVSVKEVRRGNVAGDSKNDPPKGCDSFNAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFSELLEKIDRRTGKSVENNPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIK 438
[Close]
BLAST of BQ623748 vs. ExPASy Swiss-Prot
Match: EF1A_ASPOR (Elongation factor 1-alpha OS=Aspergillus oryzae GN=tef1 PE=3 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 5.421e-70
Identity = 122/170 (71.76%), Postives = 150/170 (88.24%), Query Frame = 1 
Query:    1 GVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIK 510
            GV+KPGMVVTF P+ +TTEVKSVEMHH+ LQ   PGDNVGFNVKNV+VK+++RG VA +SK+DP     +F +QVI++NHPGQ+GNGYAPVLDCHT+HIA KF+EL+ KIDRR+GK +E +PKF+K+GDA +VKMIP+KPM VE+F+D+PPLGRFAVRDMRQTVAVGVIK
Sbjct:  269 GVIKPGMVVTFAPANVTTEVKSVEMHHQQLQAGNPGDNVGFNVKNVSVKEVRRGNVAGDSKNDPPAGCDSFNAQVIVLNHPGQVGNGYAPVLDCHTAHIACKFAELLEKIDRRTGKSVEDKPKFIKSGDAAIVKMIPSKPMCVESFTDFPPLGRFAVRDMRQTVAVGVIK 438
[Close]
BLAST of BQ623748 vs. ExPASy Swiss-Prot
Match: EF1A_ASHGO (Elongation factor 1-alpha OS=Ashbya gossypii GN=TEF PE=3 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 9.247e-70
Identity = 123/170 (72.35%), Postives = 146/170 (85.88%), Query Frame = 1 
Query:    1 GVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIK 510
            GV+KPGMVVTF PSG+TTEVKSVEMHHE L+E +PGDNVGFNVKNV+VK+++RG V  +SK+DP + A +F + VI++NHPGQI  GY+PVLDCHT+HIA KF EL+ K DRR+GK+LE  PKFLK GDA MVK +P+KPM VE F+DYPPLGRFAVRDMRQTVAVGVIK
Sbjct:  268 GVIKPGMVVTFAPSGVTTEVKSVEMHHEQLEEGVPGDNVGFNVKNVSVKEIRRGNVCGDSKNDPPKAAESFNATVIVLNHPGQISAGYSPVLDCHTAHIACKFDELLEKNDRRTGKKLEDSPKFLKAGDAAMVKFVPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIK 437
[Close]
BLAST of BQ623748 vs. ExPASy Swiss-Prot
Match: EF1A3_RHIRA (Elongation factor 1-alpha OS=Rhizomucor racemosus GN=TEF-3 PE=3 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 1.208e-69
Identity = 125/170 (73.53%), Postives = 149/170 (87.65%), Query Frame = 1 
Query:    1 GVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIK 510
            G +K GMVV F P+ +TTEVKSVEMHHE L E LPGDNVGFNVKNV+VKD++RG V S+SK+DPA+E+A+FT+QVII+NHPGQI  GYAPVLDCHT+HIA KFSEL+ KIDRRS K +E  PKF+K+GD+ +VKM+P+KPM VE ++DYPPLGRFAVRDMRQTVAVGVIK
Sbjct:  268 GTIKAGMVVNFAPAAVTTEVKSVEMHHETLTEGLPGDNVGFNVKNVSVKDIRRGNVCSDSKNDPAKESASFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFSELIEKIDRRSEK-MEDSPKFVKSGDSAIVKMVPSKPMCVEAYTDYPPLGRFAVRDMRQTVAVGVIK 436
[Close]
BLAST of BQ623748 vs. ExPASy Swiss-Prot
Match: EF1A_APIME (Elongation factor 1-alpha OS=Apis mellifera PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 1.577e-69
Identity = 122/170 (71.76%), Postives = 147/170 (86.47%), Query Frame = 1 
Query:    1 GVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIK 510
            G+LKPGM+VTF P+ LTTEVKSVEMHHEAL EALPGDNVGFNVKN++VK+L+RG+VA +SK+ P R AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K DRR+GK  E+ PK +K+GDA +V + PTKPM VE F ++PPLGRFAVRDMRQTVAVGVIK
Sbjct:  270 GILKPGMLVTFAPAALTTEVKSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPMCVEAFQEFPPLGRFAVRDMRQTVAVGVIK 439
The following BLAST results are available for this feature:
BLAST of BQ623748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
EF1A2_SCHPO2.433e-7072.35Elongation factor 1-alpha-B/C OS=Schizosaccharomyc... [more]
EF1A1_SCHPO2.433e-7072.35Elongation factor 1-alpha-A OS=Schizosaccharomyces... [more]
EF1A_STYLE3.178e-7071.18Elongation factor 1-alpha OS=Stylonychia lemnae GN... [more]
EF1A_ARTSA3.178e-7070.00Elongation factor 1-alpha OS=Artemia salina PE=1 S... [more]
EF1A1_DROME4.151e-7071.18Elongation factor 1-alpha 1 OS=Drosophila melanoga... [more]
EF1A_COCIM5.421e-7071.76Elongation factor 1-alpha OS=Coccidioides immitis ... [more]
EF1A_ASPOR5.421e-7071.76Elongation factor 1-alpha OS=Aspergillus oryzae GN... [more]
EF1A_ASHGO9.247e-7072.35Elongation factor 1-alpha OS=Ashbya gossypii GN=TE... [more]
EF1A3_RHIRA1.208e-6973.53Elongation factor 1-alpha OS=Rhizomucor racemosus ... [more]
EF1A_APIME1.577e-6971.76Elongation factor 1-alpha OS=Apis mellifera PE=3 S... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00839 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00839 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623748 ID=BQ623748; Name=BQ623748; organism=Citrus sinensis; type=EST; length=512bp
GGTGTGCTCAAGCCTGGTATGGTGGTGACATTTGGTCCCTCTGGATTGAC
AACTGAGGTTAAGTCTGTTGAGATGCACCACGAAGCTCTGCAGGAGGCCC
TTCCGGGTGACAATGTTGGCTTCAACGTGAAGAACGTTGCTGTCAAGGAT
CTCAAGCGTGGTTTTGTTGCTTCCAACTCGAAGGATGATCCGGCCAGGGA
AGCTGCCAACTTCACTTCACAGGTCATCATCATGAACCATCCTGGCCAGA
TTGGAAATGGATATGCCCCAGTGCTTGACTGCCACACCTCCCACATTGCT
GTCAAGTTTTCTGAGCTTGTGACCAAGATTGACAGGCGATCTGGCAAGGA
GCTTGAGAAGGAGCCCAAGTTCTTGAAGAATGGAGATGCCGGAATGGTTA
AGATGATTCCCACCAAGCCCATGGTTGTTGAGACCTTCTCCGACTACCCA
CCCCTTGGTCGTTTTGCTGTTAGGGACATGCGTCAGACTGTAGCTGTTGG
TGTGATCAAGAG
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