BQ623775

Overview
NameBQ623775
Unique NameBQ623775
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length582
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: ATG8_PHANO (Autophagy-related protein 8 OS=Phaeosphaeria nodorum GN=ATG8 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.534e-44
Identity = 86/100 (86.00%), Postives = 92/100 (92.00%), Query Frame = 3 
Query:   78 EAERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377
            EAERIR+KY DRIPVI EK E+SDI TIDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IY+E KDEDGFLY+TYSGENTFG
Sbjct:   17 EAERIRQKYNDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116

HSP 2 Score: 25.0238 bits (53), Expect = 1.534e-44
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 2 
Query:   32 KSNFKIEHEFEKRRA 76
            +S FK EH FEKR+A
Sbjct:    2 RSKFKDEHPFEKRKA 16
[Close]
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: ATG8_USTMA (Autophagy-related protein 8 OS=Ustilago maydis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.539e-44
Identity = 88/109 (80.73%), Postives = 96/109 (88.07%), Query Frame = 3 
Query:   51 SMNSRKGVPEAERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377
            S   RK   EAERIR+KYPDRIPVI EKA+R+DIPTIDKKKYLVP+DLTVGQFVYVIRKRIKL+ EKAIFIFVD VLP T A+MS IY+E KDEDGFLYV+YSGENTFG
Sbjct:   10 SFEKRKA--EAERIRQKYPDRIPVICEKADRTDIPTIDKKKYLVPSDLTVGQFVYVIRKRIKLAPEKAIFIFVDEVLPATAALMSAIYEEHKDEDGFLYVSYSGENTFG 116

HSP 2 Score: 24.6386 bits (52), Expect = 1.539e-44
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 2 
Query:   32 KSNFKIEHEFEKRRA 76
            +S FK EH FEKR+A
Sbjct:    2 RSAFKNEHSFEKRKA 16
[Close]
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSJ (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica GN=ATG8B PE=3 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 1.792e-44
Identity = 89/115 (77.39%), Postives = 97/115 (84.35%), Query Frame = 3 
Query:   33 KATSRLSMNSRKGVPEAERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377
            K++ +L     +   EA RIREKY DRIPVIVEKAERSDIP IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV N LPPT A+MS IY+E KDEDGFLY+TYSGENTFG
Sbjct:    3 KSSFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
[Close]
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSI (Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.792e-44
Identity = 89/115 (77.39%), Postives = 97/115 (84.35%), Query Frame = 3 
Query:   33 KATSRLSMNSRKGVPEAERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377
            K++ +L     +   EA RIREKY DRIPVIVEKAERSDIP IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV N LPPT A+MS IY+E KDEDGFLY+TYSGENTFG
Sbjct:    3 KSSFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
[Close]
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: ATG8_CHAGB (Autophagy-related protein 8 OS=Chaetomium globosum GN=ATG8 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 2.605e-44
Identity = 85/100 (85.00%), Postives = 92/100 (92.00%), Query Frame = 3 
Query:   78 EAERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377
            EAERIR+KY DRIPVI EK E+SDI TIDKKKYLVP+DLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IY+E KDEDGFLY+TYSGENTFG
Sbjct:   17 EAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116

HSP 2 Score: 25.0238 bits (53), Expect = 2.605e-44
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 2 
Query:   32 KSNFKIEHEFEKRRA 76
            +S FK EH FEKR+A
Sbjct:    2 RSKFKDEHPFEKRKA 16
[Close]
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: ATG8_EMENI (Autophagy-related protein 8 OS=Emericella nidulans GN=atg8 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 2.613e-44
Identity = 86/100 (86.00%), Postives = 91/100 (91.00%), Query Frame = 3 
Query:   78 EAERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377
            EAERIR KY DRIPVI EK E+SDI TIDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IY+E KDEDGFLY+TYSGENTFG
Sbjct:   17 EAERIRAKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116

HSP 2 Score: 25.0238 bits (53), Expect = 2.613e-44
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 2 
Query:   32 KSNFKIEHEFEKRRA 76
            +S FK EH FEKR+A
Sbjct:    2 RSKFKDEHPFEKRKA 16
[Close]
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: ATG8_COCIM (Autophagy-related protein 8 OS=Coccidioides immitis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 2.613e-44
Identity = 85/100 (85.00%), Postives = 92/100 (92.00%), Query Frame = 3 
Query:   78 EAERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377
            EAERIR+KY DRIPVI EK E+SDI TIDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IY+E KD+DGFLY+TYSGENTFG
Sbjct:   17 EAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDDDGFLYITYSGENTFG 116

HSP 2 Score: 25.0238 bits (53), Expect = 2.613e-44
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 2 
Query:   32 KSNFKIEHEFEKRRA 76
            +S FK EH FEKR+A
Sbjct:    2 RSKFKDEHPFEKRKA 16
[Close]
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: ATG8D_ARATH (Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 3.395e-44
Identity = 84/100 (84.00%), Postives = 93/100 (93.00%), Query Frame = 3 
Query:   78 EAERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377
            EA RIREKYPDRIPVIVE+AE+SD+P ID+KKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV N+LPPT AIMS IY+E KDEDGFLY++YSGENTFG
Sbjct:   18 EAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117

HSP 2 Score: 23.0978 bits (48), Expect = 3.395e-44
Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 2 
Query:   26 MSKSNFKIEHEFEKRRA 76
            M+ S+FK EH  EKR+A
Sbjct:    1 MAISSFKHEHPLEKRQA 17
[Close]
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: ATG8_SCLS1 (Autophagy-related protein 8 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=atg8 PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 7.496e-44
Identity = 84/100 (84.00%), Postives = 92/100 (92.00%), Query Frame = 3 
Query:   78 EAERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377
            EAERIR+KY DRIPVI EK E+SDI TIDKKKYLVP+DLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IY+E KDEDGFLY++YSGENTFG
Sbjct:   17 EAERIRQKYSDRIPVICEKVEKSDIATIDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYISYSGENTFG 116

HSP 2 Score: 25.0238 bits (53), Expect = 7.496e-44
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 2 
Query:   32 KSNFKIEHEFEKRRA 76
            +S FK EH FEKR+A
Sbjct:    2 RSKFKDEHPFEKRKA 16
[Close]
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: ATG8_BOTFB (Autophagy-related protein 8 OS=Botryotinia fuckeliana (strain B05.10) GN=atg8 PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 9.769e-44
Identity = 84/100 (84.00%), Postives = 92/100 (92.00%), Query Frame = 3 
Query:   78 EAERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377
            EAERIR+KY DRIPVI EK E+SDI TIDKKKYLVP+DLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IY+E KDEDGFLY++YSGENTFG
Sbjct:   17 EAERIRQKYNDRIPVICEKVEKSDIATIDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYISYSGENTFG 116

HSP 2 Score: 25.0238 bits (53), Expect = 9.769e-44
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 2 
Query:   32 KSNFKIEHEFEKRRA 76
            +S FK EH FEKR+A
Sbjct:    2 RSKFKDEHPFEKRKA 16
The following BLAST results are available for this feature:
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8_PHANO1.534e-4486.00Autophagy-related protein 8 OS=Phaeosphaeria nodor... [more]
ATG8_USTMA1.539e-4480.73Autophagy-related protein 8 OS=Ustilago maydis GN=... [more]
ATG8B_ORYSJ1.792e-4477.39Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8B_ORYSI1.792e-4477.39Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8_CHAGB2.605e-4485.00Autophagy-related protein 8 OS=Chaetomium globosum... [more]
ATG8_EMENI2.613e-4486.00Autophagy-related protein 8 OS=Emericella nidulans... [more]
ATG8_COCIM2.613e-4485.00Autophagy-related protein 8 OS=Coccidioides immiti... [more]
ATG8D_ARATH3.395e-4484.00Autophagy-related protein 8d OS=Arabidopsis thalia... [more]
ATG8_SCLS17.496e-4484.00Autophagy-related protein 8 OS=Sclerotinia sclerot... [more]
ATG8_BOTFB9.769e-4484.00Autophagy-related protein 8 OS=Botryotinia fuckeli... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00866 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00866 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623775 ID=BQ623775; Name=BQ623775; organism=Citrus sinensis; type=EST; length=582bp
ATATTATATATGATAATTAACGACAATGAGTAAAAGCAACTTCAAGATTG
AGCATGAATTCGAGAAAAGGCGTGCCTGAGGCGGAAAGAATTAGGGAGAA
ATACCCAGATAGAATTCCGGTGATAGTGGAAAAGGCTGAGAGAAGTGATA
TTCCTACAATTGACAAGAAAAAATATTTAGTCCCTGCTGACTTAACAGTG
GGTCAGTTTGTGTATGTGATACGGAAGAGAATTAAACTGAGCGCAGAAAA
GGCAATCTTTATATTTGTGGACAATGTTCTCCCGCCTACAGGAGCAATAA
TGTCTACCATATATGATGAAAAGAAGGATGAAGATGGGTTTCTCTATGTT
ACTTACAGTGGTGAAAACACATTTGGATAGCATAATCTGCCGCTACCCTT
TTTCCTCTACCAACGTTTCGTTTGTTAATCTACTCATCTTGAATTTAGTG
TTTCTGTTTTCTGGCTTTGTGCCGGTCATAATCCGGCTTCTTATTTACAT
GACCTTTTATGCTTGTATATAGCCGGTTCAAACTATGTGGGATCAGACTG
ATGATTGCGAATAATTTAAATTCGATGGAAGT
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