BQ623788

Overview
NameBQ623788
Unique NameBQ623788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length482
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623788 vs. ExPASy Swiss-Prot
Match: BGAL9_ARATH (Beta-galactosidase 9 OS=Arabidopsis thaliana GN=BGAL9 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.238e-22
Identity = 59/153 (38.56%), Postives = 88/153 (57.52%), Query Frame = 3
Query:   21 DNTFTKDGLWEQVYLTADASDYLWYMTDVNIDSNE--GFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRAGVNKISLLSTSVGLPNVGTHFEKWNAGVLGPVTLKGLNEGTRDISKQKWTYKIGLKGEALSLHTV 473
            +N FT  GL E + +T D SDYLW+ T +++  ++   + KNG +  ++I S    L+VF+N QL+G++ G      +   + V+   G N + LL+ +VGL N G   EK  AG  G   L G   G  D+SK  WTY++GLKGEA  ++TV
Sbjct:  483 ENNFTFQGLLEHLNVTKDRSDYLWHKTRISVSEDDISFWKKNGPNSTVSIDSMRDVLRVFVNKQLAGSIVGHW----VKAVQPVRFIQGNNDLLLLTQTVGLQNYGAFLEKDGAGFRGKAKLTGFKNGDLDLSKSSWTYQVGLKGEADKIYTV 631          
BLAST of BQ623788 vs. ExPASy Swiss-Prot
Match: BGA15_ARATH (Beta-galactosidase 15 OS=Arabidopsis thaliana GN=BGAL15 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.758e-22
Identity = 60/140 (42.86%), Postives = 81/140 (57.86%), Query Frame = 3
Query:   45 LWEQVYLTADASDYLWYMTDVNIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKL--TFSKNVKLRAGVNKISLLSTSVGLPNVGTHFEKWNAGVLGPVTLKGLNEG---TRDISKQKWTYKIGLKG 449
            L++Q  ++ D SDYLWYMT VN+   +  L  G++  L I S  H L  F+NGQ  G     +EN K    F ++ K   G N I+LLS +VGLPN G  FE ++AG+ GPV + G N      +D+S  KW+YK GL G
Sbjct:  457 LFDQKVVSNDESDYLWYMTTVNLKEQDPVL--GKNMSLRINSTAHVLHAFVNGQHIGNY--RVENGKFHYVFEQDAKFNPGANVITLLSITVGLPNYGAFFENFSAGITGPVFIIGRNGDETIVKDLSTHKWSYKTGLSG 592          
BLAST of BQ623788 vs. ExPASy Swiss-Prot
Match: BGA13_ARATH (Beta-galactosidase 13 OS=Arabidopsis thaliana GN=BGAL13 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 6.145e-22
Identity = 56/140 (40.00%), Postives = 78/140 (55.71%), Query Frame = 3
Query:   63 LTADASDYLWYMTDVNIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRAGVNKISLLSTSVGLPNVGTHFEKWNAGVLGPVTLKGLNEGTRDISKQ-KWTYKIGLKGEALSLHTVSG 479
            LT D SDY WY T   ID N+   K G  P L I S GHAL V++NG+  G  +GS E     F K V L+ G N +++L    G P+ G++ E    G    V++ GL  GT D++++ KW  K+G++GE L +H   G
Sbjct:  481 LTKDESDYGWYTTSFKIDDNDLSKKKGGKPNLRIASLGHALHVWLNGEYLGNGHGSHEEKSFVFQKPVTLKEGENHLTMLGVLTGFPDSGSYMEHRYTGPRS-VSILGLGSGTLDLTEENKWGNKVGMEGERLGIHAEEG 619          
BLAST of BQ623788 vs. ExPASy Swiss-Prot
Match: BGA14_ARATH (Beta-galactosidase 14 OS=Arabidopsis thaliana GN=BGAL14 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 1.048e-21
Identity = 55/145 (37.93%), Postives = 84/145 (57.93%), Query Frame = 3
Query:   51 EQVYLTADASDYLWYMTDVNIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRAGVNKISLLSTSVGLPNVGTHFEKWNAGVLGPVTLKGLNEGTRDISK-QKWTYKIGLKGEALSLHTVSGS 482
            E  YLT D +DY WY T V ID ++   + G   +L + S GHAL V++NG+ +G  +G  E     F+K V  + G N+IS+L    GLP+ G++ E   AG    +++ GL  GTRD+++  +W +  GL+GE   ++T  GS
Sbjct:  474 ELYYLTKDKTDYAWYTTSVKIDEDDFPDQKGLKTILRVASLGHALIVYVNGEYAGKAHGRHEMKSFEFAKPVNFKTGDNRISILGVLTGLPDSGSYMEHRFAGPRA-ISIIGLKSGTRDLTENNEWGHLAGLEGEKKEVYTEEGS 617          
BLAST of BQ623788 vs. ExPASy Swiss-Prot
Match: BGA11_ORYSJ (Beta-galactosidase 11 OS=Oryza sativa subsp. japonica GN=Os08g0549200 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 6.794e-21
Identity = 51/143 (35.66%), Postives = 83/143 (58.04%), Query Frame = 3
Query:   51 EQVYLTADASDYLWYMTDVNIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRAGVNKISLLSTSVGLPNVGTHFEKWNAGVLGPVTLKGLNEGTRDISKQKWTYKIGLKGEALSLHTVSG 479
            EQ   T D +DYLWY T   +++++   +    P+L + S GHA+  F+N    G  +G+  N   T  K + L+ GVN +++LS+++GL + G++ E   AGV   VT++GLN GT D++   W + +GL GE   +H+  G
Sbjct:  469 EQYNQTKDKTDYLWYTTSFRLETDDLPYRKEVKPVLEVSSHGHAIVAFVNDAFVGCGHGTKINKAFTMEKAMDLKVGVNHVAILSSTLGLMDSGSYLEHRMAGVY-TVTIRGLNTGTLDLTTNGWGHVVGLDGERRRVHSEQG 610          
BLAST of BQ623788 vs. ExPASy Swiss-Prot
Match: BGA11_ARATH (Beta-galactosidase 11 OS=Arabidopsis thaliana GN=BGAL11 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.514e-20
Identity = 53/140 (37.86%), Postives = 76/140 (54.29%), Query Frame = 3
Query:   63 LTADASDYLWYMTDVNIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRAGVNKISLLSTSVGLPNVGTHFEKWNAGVLGPVTLKGLNEGTRDISK-QKWTYKIGLKGEALSLHTVSG 479
            LT D +DY WY T   +  N    K G    + I S GHAL  ++NG+  G+ +GS E     F K V L+AG N + +L    G P+ G++ E    G  G +++ GL  GT D+++  KW  KIG++GE L +HT  G
Sbjct:  478 LTKDKTDYGWYTTSFKVHKNHLPTKKGVKTFVRIASLGHALHAWLNGEYLGSGHGSHEEKSFVFQKQVTLKAGENHLVMLGVLTGFPDSGSYMEHRYTGPRG-ISILGLTSGTLDLTESSKWGNKIGMEGEKLGIHTEEG 616          
BLAST of BQ623788 vs. ExPASy Swiss-Prot
Match: BGAL_BRAOL (Beta-galactosidase OS=Brassica oleracea PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 7.512e-20
Identity = 57/139 (41.01%), Postives = 72/139 (51.80%), Query Frame = 3
Query:   42 GLWEQVYLTADASDYLWYMTDVNIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRAGVNKISLLSTSVGLPNVGTHFEKWNAGVLGPVTL---KGLNEGTRDISKQKWTYKIGLKG 449
            GL +Q  +T DASDYLWYMT V++D  +          L + S  H L  ++NG+  G            F K V L  G N ++LLS SVGL N G  FE    G+ GPV L   KG     +D+SK +W YKIGL G
Sbjct:  459 GLVDQKDVTNDASDYLWYMTRVHLDKKDPIWSRNMS--LRVHSNAHVLHAYVNGKYVGNQIVRDNKFDYRFEKKVNLVHGTNHLALLSVSVGLQNYGPFFESGPTGINGPVKLVGYKGDETIEKDLSKHQWDYKIGLNG 595          
BLAST of BQ623788 vs. ExPASy Swiss-Prot
Match: BGAL1_ORYSJ (Beta-galactosidase 1 OS=Oryza sativa subsp. japonica GN=Os01g0533400 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.281e-19
Identity = 59/151 (39.07%), Postives = 77/151 (50.99%), Query Frame = 3
Query:   18 DDNTFTKDGLWEQVYLTADASDYLWYMTDVNIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRAGVNKISLLSTSVGLPNVGTHFEKWNAGVL-GPVTLKGLNEGTRDISKQKWTYKIGLKGEALSLH 467
            +   F K+ L EQ+  + D SDYLWY T +N    EG  K      L + + GH L  F+NG+L G  + +  +        VKL  G N ISLLS +VGL N G  FEK   G++ GPV L   N    D+S   W+YK GL  E   +H
Sbjct:  460 EKGNFRKNELLEQIVTSTDQSDYLWYRTSLN-HKGEGSYK------LYVNTTGHELYAFVNGKLIGKNHSADGDFVFQLESPVKLHDGKNYISLLSATVGLKNYGPSFEKMPTGIVGGPVKLIDSNGTAIDLSNSSWSYKAGLASEYRQIH 603          
BLAST of BQ623788 vs. ExPASy Swiss-Prot
Match: BGA10_ORYSJ (Putative beta-galactosidase 10 OS=Oryza sativa subsp. japonica GN=Os06g0628500 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 4.869e-19
Identity = 58/157 (36.94%), Postives = 78/157 (49.68%), Query Frame = 3
Query:    3 TASSTDDN-TFTKDGLWEQVYLTADASDYLWYMTDVNIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRAGVNKISLLSTSVGLPNVGTHFEKWNAGVL-GPVTLKGLNEGTRDISKQKWTYKIGLKGEALSLH 467
            T   TD+  ++ K+ L EQ+  + D SDYLWY T +N      +        L + + GH L  F+NG L G  +    +         KL  G N ISLLS ++GL N G  FEK  AG++ GPV L   N    D+S   W+YK GL GE   +H
Sbjct:  435 TPFMTDEKGSYRKNELLEQIVTSTDQSDYLWYRTSINHKGEASYT-------LFVNTTGHELYAFVNGMLVGQNHSPNGHFVFQLESPAKLHDGKNYISLLSATIGLKNYGPLFEKMPAGIVGGPVKLIDNNGKGIDLSNSSWSYKAGLAGEYRQIH 584          
BLAST of BQ623788 vs. ExPASy Swiss-Prot
Match: BGA13_ORYSJ (Beta-galactosidase 13 OS=Oryza sativa subsp. japonica GN=Os10g0330600 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.085e-18
Identity = 58/157 (36.94%), Postives = 79/157 (50.32%), Query Frame = 3
Query:    3 TASSTDDN-TFTKDGLWEQVYLTADASDYLWYMTDVNIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRAGVNKISLLSTSVGLPNVGTHFEKWNAGVL-GPVTLKGLNEGTRDISKQKWTYKIGLKGEALSLH 467
            T   TD+  ++ K+ L EQ+  + D SDYLWY T ++      +        L + + GH L  F+NG L G  +    +        VKL  G N ISLLS ++GL N G  FEK  AG++ GPV L   N    D+S   W+YK GL GE   +H
Sbjct:  454 TPFMTDEKGSYRKNELLEQIVTSTDQSDYLWYRTSLDHKGEASYT-------LFVNTTGHELYAFVNGMLVGKNHSPNGHFVFQLESAVKLHDGKNYISLLSATIGLKNYGPLFEKMPAGIVGGPVKLIDNNGTGIDLSNSSWSYKAGLAGEYRQIH 603          
The following BLAST results are available for this feature:
BLAST of BQ623788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
BGAL9_ARATH1.238e-2238.56Beta-galactosidase 9 OS=Arabidopsis thaliana GN=BG... [more]
BGA15_ARATH2.758e-2242.86Beta-galactosidase 15 OS=Arabidopsis thaliana GN=B... [more]
BGA13_ARATH6.145e-2240.00Beta-galactosidase 13 OS=Arabidopsis thaliana GN=B... [more]
BGA14_ARATH1.048e-2137.93Beta-galactosidase 14 OS=Arabidopsis thaliana GN=B... [more]
BGA11_ORYSJ6.794e-2135.66Beta-galactosidase 11 OS=Oryza sativa subsp. japon... [more]
BGA11_ARATH1.514e-2037.86Beta-galactosidase 11 OS=Arabidopsis thaliana GN=B... [more]
BGAL_BRAOL7.512e-2041.01Beta-galactosidase OS=Brassica oleracea PE=2 SV=1[more]
BGAL1_ORYSJ1.281e-1939.07Beta-galactosidase 1 OS=Oryza sativa subsp. japoni... [more]
BGA10_ORYSJ4.869e-1936.94Putative beta-galactosidase 10 OS=Oryza sativa sub... [more]
BGA13_ORYSJ1.085e-1836.94Beta-galactosidase 13 OS=Oryza sativa subsp. japon... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00879 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00879 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623788 ID=BQ623788; Name=BQ623788; organism=Citrus sinensis; type=EST; length=482bp
GAACTGCTTCTTCTACTGACGATAATACATTTACAAAAGATGGGTTATGG
GAACAAGTATATCTTACTGCAGATGCTTCAGATTATTTGTGGTACATGAC
AGATGTAAATATAGACTCCAACGAAGGATTTCTGAAGAATGGACAAGATC
CCCTTCTTACCATTTGGTCAGCCGGCCATGCCCTGCAGGTTTTCATTAAT
GGTCAACTATCAGGAACTGTTTATGGTTCATTAGAGAACCCTAAATTGAC
ATTCAGTAAGAATGTGAAACTGAGAGCTGGTGTTAATAAGATTTCTCTTC
TAAGTACTTCTGTAGGCCTTCCGAATGTGGGCACACACTTTGAGAAATGG
AATGCTGGGGTTCTTGGGCCAGTAACTTTGAAGGGTCTAAATGAGGGGAC
GAGAGACATATCTAAGCAAAAGTGGACTTACAAGATTGGTCTAAAAGGTG
AGGCCTTAAGCCTTCATACTGTTAGTGGGAGT
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