BQ623816
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623816 vs. ExPASy Swiss-Prot
Match: RLA0_PYRHO (Acidic ribosomal protein P0 homolog OS=Pyrococcus horikoshii GN=rplP0 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.211e-15 Identity = 54/185 (29.19%), Postives = 89/185 (48.11%), Query Frame = 2 Query: 44 KLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVL-MGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTGEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLGVQSVYETG 592 +L +L++ Y I + ++ + L +RR +R + +L + +NT+++ I+ A++ G L+ + G++ T + APA+ G V P DVVVP G T L P Q L IP +I KG I +++ G+ + A +L LGI+P GL V +VYE G Sbjct: 14 ELAKLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAIKKAAKELGKPELEKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVVPAGPTPLAPGPIVGQMQALGIPARIEKGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYEDG 198
BLAST of BQ623816 vs. ExPASy Swiss-Prot
Match: RLA0_PYRFU (Acidic ribosomal protein P0 homolog OS=Pyrococcus furiosus GN=rplP0 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.606e-14 Identity = 50/185 (27.03%), Postives = 91/185 (49.19%), Query Frame = 2 Query: 44 KLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVL-MGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTGEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLGVQSVYETG 592 +L L++ Y + + ++ + L +RR +R ++ +L + +NT+++ I+ A++ G LI ++G G++ T + APA+ G P DVV+P G T L P Q + IP +I +G I +++ G+++ A +L LGI+P GL + +VYE G Sbjct: 14 ELANLIKSYPVVALVDVSSMPAYPLSQMRRLIRENNGLLRVSRNTLIELAIKKVAQELGKPELEKLINYIEGGAGILVTTMNPFKLYKFLQQNRQPAPAKPGAKVPKDVVIPAGPTSLAPGPIVGQMQAMGIPARIERGKVTIQKDTVVLKAGEEITPELANILNALGIQPLEVGLDLLAVYEDG 198
BLAST of BQ623816 vs. ExPASy Swiss-Prot
Match: RLA0_METJA (Acidic ribosomal protein P0 homolog OS=Methanocaldococcus jannaschii GN=rplP0 PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.098e-14 Identity = 53/174 (30.46%), Postives = 84/174 (48.28%), Query Frame = 2 Query: 80 LVAAAD--NVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTGEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLGVQSVYETG 592 +VA D +V + QLQ IR +R + M +NT++ R ++ AE+ N L ++ ++ T + AP R G +AP D+ V G+TG+ P + + IP I KG I +++KG+ V AA+L +LGI+P GL + +VYE G Sbjct: 29 VVAIVDMMDVPAPQLQEIRDKIRDKVKLRMSRNTLIIRALKEAAEELNNPKLAELANYVERGAAILVTDMNPFKLYKLLEENKSPAPVRGGQIAPCDIKVEKGSTGMPPGPFLGELKSVGIPAAIEKGKIAIKEDKVVVKKGEVVSPKLAAVLDRLGIKPIKVGLNILAVYEDG 202
BLAST of BQ623816 vs. ExPASy Swiss-Prot
Match: RLA0_HALMA (50S ribosomal protein L10E OS=Haloarcula marismortui GN=rplP0 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.098e-14 Identity = 49/183 (26.78%), Postives = 92/183 (50.27%), Query Frame = 2 Query: 47 LCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTGEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLGVQSVYETG 592 + +++E Y + V + S QLQ++RR L G + + + +NT+++R + + +L + G VGLI T + AP G VAP D+V+P G+TG+DP Q + +I +G+ ++++ ++ G++V + +L +LGI P GL +++V+ G Sbjct: 23 IVEMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERAL-----DDVDDGLEDLNGYITGQVGLIGTDDNPFSLFQELEASKTPAPIGAGEVAPNDIVIPEGDTGVDPGPFVGELQSVGADARIQEGSIQVLSDSTVLDTGEEVSQELSNVLNELGIEPKEVGLDLRAVFADG 200
BLAST of BQ623816 vs. ExPASy Swiss-Prot
Match: RLA0_THEGJ (Acidic ribosomal protein P0 homolog OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rplP0 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.041e-13 Identity = 48/182 (26.37%), Postives = 85/182 (46.70%), Query Frame = 2 Query: 44 KLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTGEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLGVQSVYE 586 +L ++++ + I + V + L +R LRG +++ + +NT+++ I+ A++ L ++G ++ T+ + APA+ G V P DVV+P G T L P Q L IP +I KG I +++ G+ + A +L LGI P GL + + YE Sbjct: 14 ELTKIIKSHPVIALVDVAGVPAYPLSKMRDKLRGKALLRVSRNTLIELAIKRAAQELNKPDLEKLADYIEGGAAILATEMNPFKLYKLLEESKTPAPAKPGAVVPKDVVIPAGPTSLAPGPLVGEMQALGIPARIEKGKVTIQKDYTVLKAGEVITEQLARILNALGIEPLEVGLNLLAAYE 195
BLAST of BQ623816 vs. ExPASy Swiss-Prot
Match: RLA0_PYRAB (Acidic ribosomal protein P0 homolog OS=Pyrococcus abyssi GN=rplP0 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.041e-13 Identity = 51/185 (27.57%), Postives = 87/185 (47.03%), Query Frame = 2 Query: 44 KLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVL-MGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTGEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLGVQSVYETG 592 +L L++ Y I + ++ + L +RR +R + +L + +NT+++ I+ A++ G L + G++ T + APA+ G V P DVV+P G T L P Q + IP +I +G I +++ G+ + A +L LGI+P GL V +VYE G Sbjct: 14 ELANLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAIKKAAQELGKPELEKLAEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVIPAGPTPLAPGPIVGQMQAMGIPARIERGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYEDG 198
BLAST of BQ623816 vs. ExPASy Swiss-Prot
Match: RLA0_METST (Acidic ribosomal protein P0 homolog OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rplP0 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.029e-13 Identity = 45/164 (27.44%), Postives = 82/164 (50.00%), Query Frame = 2 Query: 98 NVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTGEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLGVQSVYE 586 ++ + QLQ +R+ L ++++ M + K I++ E + L L+G ++FTK + APA+ G +AP D+VVP G+T P Q + IP KI+KG+ + +++ +G+++ + A +L KL I P G+ + +V E Sbjct: 32 DIPAKQLQTMRKSLGDNAILKMSR----KNFIKIALENSDKEEVEGLADYLEGQPAMVFTKMNPFKLFKILEDSKTEAPAKAGSIAPADIVVPAGDTSFPPGPILGELQQVGIPAKIDKGSIVVTDDAKIVDEGEEIPKAVADILTKLEIHPMEVGIDLLAVCE 191
BLAST of BQ623816 vs. ExPASy Swiss-Prot
Match: RLA0_PICTO (Acidic ribosomal protein P0 homolog OS=Picrophilus torridus GN=rplP0 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.273e-11 Identity = 48/171 (28.07%), Postives = 76/171 (44.44%), Query Frame = 2 Query: 83 VAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPS-QTSFFQVLNIPTKINKGTGEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLGVQSVYETG 592 + + + +N+ Q IR +R + + + + R +R+ E TG + L G V LI T APA+ G +A D+V+ P T P + S FQ +P I KG I + V ++KGD + +A +L L I P + GL + + YE G Sbjct: 27 IVSIKGLRNNEFQKIRNSIRDKARIKVSR----ARLLRLAIENTGKNNIVKLKDYAHGQVALITTDESPKKIYDILEKSKTKAPAKGGEIAEEDIVIEPKETNFPPGPKISEFQKAGLPAAIEKGKIVIKSEVTFVKKGDVITREKALVLKDLEIYPITAGLDLIAAYEDG 193 The following BLAST results are available for this feature:
BLAST of BQ623816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623816 ID=BQ623816; Name=BQ623816; organism=Citrus sinensis; type=EST; length=603bpback to top |