BQ623826

Overview
NameBQ623826
Unique NameBQ623826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623826 vs. ExPASy Swiss-Prot
Match: GL35_ORYSJ (Germin-like protein 3-5 OS=Oryza sativa subsp. japonica GN=Os03g0693900 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.482e-15
Identity = 44/124 (35.48%), Postives = 68/124 (54.84%), Query Frame = 3
Query:    9 RLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLKAILGG 368
            R+D A GG  P H HP A+E+ +V+ G +  G I +  + N  Y K ++ G+  + P+GL+HFQ N G   A   VSFNS NPG+      LF +N  + + ++ +   +D   V+ LK+   G
Sbjct:  102 RVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKFTG 225          
BLAST of BQ623826 vs. ExPASy Swiss-Prot
Match: GL33_ORYSJ (Germin-like protein 3-3 OS=Oryza sativa subsp. japonica GN=Os03g0693700 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.482e-15
Identity = 44/124 (35.48%), Postives = 68/124 (54.84%), Query Frame = 3
Query:    9 RLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLKAILGG 368
            R+D A GG  P H HP A+E+ +V+ G +  G I S  + N  Y + ++ G+  + P+GL+HFQ N G   A   VSFNS NPG+      LF +N  + + ++ +   +D   V+ LK+   G
Sbjct:  102 RIDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGSLDTGNRYYSRVVRGGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKFTG 225          
BLAST of BQ623826 vs. ExPASy Swiss-Prot
Match: GL34_ORYSJ (Putative germin-like protein 3-4 OS=Oryza sativa subsp. japonica GN=Os03g0693800 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.547e-15
Identity = 44/124 (35.48%), Postives = 67/124 (54.03%), Query Frame = 3
Query:    9 RLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLKAILGG 368
            R+D A GG  P H HP A+E+ +V+ G +  G I +    N  Y K ++ G+  + P+GL+HFQ N G   A   VSFNS NPG+      LF +N  + + ++ +   +D   V+ LK+   G
Sbjct:  104 RVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDMGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDTGVVELLKSKFTG 227          
BLAST of BQ623826 vs. ExPASy Swiss-Prot
Match: GL32_ARATH (Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana GN=At3g10080 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.939e-15
Identity = 41/115 (35.65%), Postives = 68/115 (59.13%), Query Frame = 3
Query:    9 RLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLK 353
            R DL  G + P H HP A+E+  +V G + +GF+ S+ N VY K +++G++M++P+GL+HFQ+N G   A      NS NPG+Q     +F + ++ +L+ +   L    +  LK
Sbjct:  103 RADLKPGSINPPHYHPRATEVAHLVKGRVYSGFVDSN-NKVYAKVMEEGEMMVYPKGLVHFQMNVGDVTATIVGGLNSQNPGIQKIPSVVFGSGINEELLMKAFGLSLKQIGTLK 216          
BLAST of BQ623826 vs. ExPASy Swiss-Prot
Match: OXO2_HORVU (Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.756e-15
Identity = 40/96 (41.67%), Postives = 56/96 (58.33%), Query Frame = 3
Query:    9 RLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN 290
            R+D A GG  P H HP A+EI +V+ G +  G + S  S N +Y + ++ G+  + P+GL+HFQ N G   A   VSFNS NPG+      LF +N
Sbjct:   99 RVDFAPGGTNPPHVHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSN 194          
BLAST of BQ623826 vs. ExPASy Swiss-Prot
Match: GL89_ORYSJ (Germin-like protein 8-9 OS=Oryza sativa subsp. japonica GN=Os08g0189850 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.756e-15
Identity = 45/122 (36.89%), Postives = 72/122 (59.02%), Query Frame = 3
Query:    3 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLKA 356
            +AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K L KGD+ +FP GL+HFQ N      A+   + +S NPG+     A+F +   +S +++ +   +   T+  L+A
Sbjct:   95 IARIDYAPLGQNPPHTHPRATEILTVLEGTLHVGFVTSNPNNTLFSKVLNKGDVFVFPVGLIHFQFNPNPHQPAVAIAALSSQNPGVITIANAVFGSKPPISDEVLAKAFQVGKGTIDWLQA 216          
BLAST of BQ623826 vs. ExPASy Swiss-Prot
Match: GL82_ORYSJ (Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.756e-15
Identity = 45/122 (36.89%), Postives = 71/122 (58.20%), Query Frame = 3
Query:    3 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLKA 356
            +ARLD A  G+ P HTHP A+EI  V+ G +  GF++S+  N +  K L KGD+ +FP+GL+HFQ N      A+   + +S NPG+     A+F +N  +S  ++ +   +D   +  L+A
Sbjct:   98 IARLDFAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNPDNRLLSKVLNKGDVFVFPEGLIHFQFNPNPHKPAVAIAALSSQNPGVITIANAVFGSNPPISDDILMKAFQVDKKIIDLLQA 219          
BLAST of BQ623826 vs. ExPASy Swiss-Prot
Match: GL810_ORYSJ (Germin-like protein 8-10 OS=Oryza sativa subsp. japonica GN=GLP2 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.756e-15
Identity = 45/122 (36.89%), Postives = 72/122 (59.02%), Query Frame = 3
Query:    3 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLKA 356
            +AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K L KGD+ +FP+GL+HFQ N      A+   + +S NPG      A+F +   +S  ++ +   ++  T+  L+A
Sbjct:   95 IARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDIVLAKAFQVEKGTIDWLQA 216          
BLAST of BQ623826 vs. ExPASy Swiss-Prot
Match: OXO1_HORVU (Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.013e-14
Identity = 43/124 (34.68%), Postives = 69/124 (55.65%), Query Frame = 3
Query:    9 RLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLKAILGG 368
            R+D A GG  P H HP A+EI +V+ G +  G + S  S N +Y + ++ G+  + P+GL+HFQ N G   A   VSFNS NPG+      LF ++  + + ++ +   ++   V+ LK+   G
Sbjct:   76 RVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGIVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKFAG 199          
BLAST of BQ623826 vs. ExPASy Swiss-Prot
Match: GLT1_ARATH (Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana GN=GLP1 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.013e-14
Identity = 43/117 (36.75%), Postives = 68/117 (58.12%), Query Frame = 3
Query:   12 LDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFAN--NLSSQLVEQTTFLDDATVKRLKA 356
            ++LA GGV P H HP A+E+  V+ G +  GF+S++ NT++ K L  G+  + P+GL+HFQ N G   A    +FNS  PG  +    LF +   + + ++ +    DD TV+ LK+
Sbjct:  101 VELAPGGVNPPHLHPRATEVGTVIEGSVFVGFLSTN-NTLFSKVLNAGEAFVIPRGLVHFQWNVGQVKARMITAFNSQLPGAVVLPSTLFGSKPEIPNAVLTRAFRTDDTTVQNLKS 216          
The following BLAST results are available for this feature:
BLAST of BQ623826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
GL35_ORYSJ3.482e-1535.48Germin-like protein 3-5 OS=Oryza sativa subsp. jap... [more]
GL33_ORYSJ3.482e-1535.48Germin-like protein 3-3 OS=Oryza sativa subsp. jap... [more]
GL34_ORYSJ4.547e-1535.48Putative germin-like protein 3-4 OS=Oryza sativa s... [more]
GL32_ARATH5.939e-1535.65Germin-like protein subfamily 3 member 2 OS=Arabid... [more]
OXO2_HORVU7.756e-1541.67Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1[more]
GL89_ORYSJ7.756e-1536.89Germin-like protein 8-9 OS=Oryza sativa subsp. jap... [more]
GL82_ORYSJ7.756e-1536.89Germin-like protein 8-2 OS=Oryza sativa subsp. jap... [more]
GL810_ORYSJ7.756e-1536.89Germin-like protein 8-10 OS=Oryza sativa subsp. ja... [more]
OXO1_HORVU1.013e-1434.68Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1[more]
GLT1_ARATH1.013e-1436.75Germin-like protein subfamily T member 1 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01005 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01005 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623826 ID=BQ623826; Name=BQ623826; organism=Citrus sinensis; type=EST; length=551bp
GCTTGGCACGCCTAGATCTTGCAAAGGGTGGCGTAATCCCAATCCACACT
CATCCAGCTGCTTCCGAAATCCTTCTTGTTGTGCATGGCTGCATAACTGC
CGGGTTCATTTCCTCTTCAGCTAACACTGTTTACGTAAAGACGCTTAAGA
AGGGAGATATCATGATCTTTCCACAAGGGTTGTTGCATTTTCAAGTAAAT
TCCGGTGCGGACGGAGCCCTCGGTTTTGTTAGCTTCAACAGCCCGAATCC
TGGACTCCAAATCACCGATTTCGCCTTATTTGCTAACAACTTGTCTTCCC
AATTGGTGGAGCAGACCACTTTCCTTGACGATGCTACGGTGAAGAGGCTC
AAGGCTATCCTTGGTGGCACCGGCTAGGCTTATTAGTTACCACATTCTTC
ATTTGTAGTTTTGAGTTCTTAATTTCATTTAGTTGCTAATGTTTTTGATT
GTTGGAATTCACGAGTTAGTATTTTCTGTTCTCACTTCCCCTATCTTTTC
TTCTGAATAAATAAAATTTCTCTCATTTAAAAAAAAAAAAAAAAAAACTC
C
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