BQ623874

Overview
NameBQ623874
Unique NameBQ623874
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623874 vs. ExPASy Swiss-Prot
Match: DNJB4_PONAB (DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.540e-17
Identity = 45/116 (38.79%), Postives = 66/116 (56.90%), Query Frame = 3
Query:    3 EAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 350
            E P+++  DIVF+++ K+HPKFKR G ++     +SL EALCG    +  LDGR   I     ++VKP   + I   G+P  + P  RG L I F V FP+++S    ++L   LP
Sbjct:  222 ETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRN--IPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335          
BLAST of BQ623874 vs. ExPASy Swiss-Prot
Match: DNJB4_HUMAN (DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.540e-17
Identity = 45/116 (38.79%), Postives = 66/116 (56.90%), Query Frame = 3
Query:    3 EAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 350
            E P+++  DIVF+++ K+HPKFKR G ++     +SL EALCG    +  LDGR   I     ++VKP   + I   G+P  + P  RG L I F V FP+++S    ++L   LP
Sbjct:  222 ETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRN--IPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335          
BLAST of BQ623874 vs. ExPASy Swiss-Prot
Match: DNJB4_MOUSE (DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.757e-16
Identity = 45/116 (38.79%), Postives = 66/116 (56.90%), Query Frame = 3
Query:    3 EAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 350
            E P+++  DIVFV++ KEHPKFKR G ++     +SL EALCG    +  +DGR L +     ++VKP   + +   G+P  + P  RG L I F V FP+ +S    ++L   LP
Sbjct:  222 ETPNSIPADIVFVIKDKEHPKFKRDGSNIVYTAKISLREALCGCSLNVPTMDGRNLPMSVT--DIVKPGMRRRVIGYGLPFPKNPDQRGDLLIEFDVSFPDVISAASKEILRKHLP 335          
BLAST of BQ623874 vs. ExPASy Swiss-Prot
Match: DNJB4_BOVIN (DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.757e-16
Identity = 45/116 (38.79%), Postives = 65/116 (56.03%), Query Frame = 3
Query:    3 EAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 350
            E P ++  DIVFV++ K+HPKFKR G ++     +SL EALCG    +  +DGR   I     ++VKP   + I   G+P  + P  RG L I F V FP+++S    ++L   LP
Sbjct:  222 ETPTSIPADIVFVIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTMDGR--TIPMTINDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335          
BLAST of BQ623874 vs. ExPASy Swiss-Prot
Match: DNJA1_DICDI (DnaJ homolog subfamily A member 1 homolog OS=Dictyostelium discoideum GN=dnaja1 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16
Identity = 43/140 (30.71%), Postives = 77/140 (55.00%), Query Frame = 3
Query:    3 EAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVN 422
            E P    GD++  +++K +  FKR GD+L     L L +++ G QF+I  LD R+L +  + G+++K    + I +EGMP+ +    +GKL I F +++P +L+ D  + L  +LP   +  ++     +C+   L  VN
Sbjct:  268 EYPGVPPGDVIITIREKPNVNFKRNGDNLIYTKRLKLLDSIAGSQFIINTLDQRKLWVNHEKGDIIKQGDMRYIENEGMPI-KGTSRKGKLIIAFDIEYPSNLTNDDIEKLSKILPKAATPSVSK---SDCKSVGLSKVN 403          
BLAST of BQ623874 vs. ExPASy Swiss-Prot
Match: DNJB5_MOUSE (DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.720e-16
Identity = 45/114 (39.47%), Postives = 64/114 (56.14%), Query Frame = 3
Query:    9 PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 350
            PD +  DIVFVL+ K H  F+R G ++     +SL EALCG    I  +DGR  +I     +V+KP   K +  EG+P  + P  RG L + F V FP+ L+P   ++L+  LP
Sbjct:  235 PDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGR--VIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346          
BLAST of BQ623874 vs. ExPASy Swiss-Prot
Match: DNJB5_HUMAN (DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.720e-16
Identity = 45/114 (39.47%), Postives = 64/114 (56.14%), Query Frame = 3
Query:    9 PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 350
            PD +  DIVFVL+ K H  F+R G ++     +SL EALCG    I  +DGR  +I     +V+KP   K +  EG+P  + P  RG L + F V FP+ L+P   ++L+  LP
Sbjct:  235 PDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGR--VIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346          
BLAST of BQ623874 vs. ExPASy Swiss-Prot
Match: DNJB5_BOVIN (DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.720e-16
Identity = 45/114 (39.47%), Postives = 64/114 (56.14%), Query Frame = 3
Query:    9 PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 350
            PD +  DIVFVL+ K H  F+R G ++     +SL EALCG    I  +DGR  +I     +V+KP   K +  EG+P  + P  RG L + F V FP+ L+P   ++L+  LP
Sbjct:  235 PDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGR--VIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346          
BLAST of BQ623874 vs. ExPASy Swiss-Prot
Match: DNAJ1_DROME (DnaJ protein homolog 1 OS=Drosophila melanogaster GN=DnaJ-1 PE=1 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 1.259e-14
Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = 3
Query:    6 APDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 350
            AP+    DIVF+++ K H  FKR+G DL     +SL +ALCG    +  L G ++ +     E++KP   + IN  G+P+ + P  RG L + F + FP++L+P     L  +LP
Sbjct:  220 APNKTPADIVFIIRDKPHSLFKREGIDLKYTAQISLKQALCGALVSVPTLQGSRIQVNPN-HEIIKPTTTRRINGLGLPVPKEPSRRGDLIVSFDIKFPDTLAPSLQNQLSELLP 333          
BLAST of BQ623874 vs. ExPASy Swiss-Prot
Match: DJB13_MOUSE (DnaJ homolog subfamily B member 13 OS=Mus musculus GN=Dnajb13 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.259e-14
Identity = 40/115 (34.78%), Postives = 67/115 (58.26%), Query Frame = 3
Query:    3 EAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVL 347
            + P+ +  DI+F++++K HP+F+R+ D+LF  + + L +AL      +  LD R L I     ++V P  FK +  EGMP+ + P  +G L+I F + FP  L+P + +ML   L
Sbjct:  202 QGPNIIPADIIFIVKEKLHPRFRREHDNLFFVYPIPLGKALTCCTVEVKTLDDRLLNIPIN--DIVHPKYFKIVPGEGMPLPENPSKKGDLFIFFDIQFPTRLTPQKKQMLRQAL 314          
The following BLAST results are available for this feature:
BLAST of BQ623874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
DNJB4_PONAB3.540e-1738.79DnaJ homolog subfamily B member 4 OS=Pongo abelii ... [more]
DNJB4_HUMAN3.540e-1738.79DnaJ homolog subfamily B member 4 OS=Homo sapiens ... [more]
DNJB4_MOUSE1.757e-1638.79DnaJ homolog subfamily B member 4 OS=Mus musculus ... [more]
DNJB4_BOVIN1.757e-1638.79DnaJ homolog subfamily B member 4 OS=Bos taurus GN... [more]
DNJA1_DICDI2.295e-1630.71DnaJ homolog subfamily A member 1 homolog OS=Dicty... [more]
DNJB5_MOUSE8.720e-1639.47DnaJ homolog subfamily B member 5 OS=Mus musculus ... [more]
DNJB5_HUMAN8.720e-1639.47DnaJ homolog subfamily B member 5 OS=Homo sapiens ... [more]
DNJB5_BOVIN8.720e-1639.47DnaJ homolog subfamily B member 5 OS=Bos taurus GN... [more]
DNAJ1_DROME1.259e-1435.65DnaJ protein homolog 1 OS=Drosophila melanogaster ... [more]
DJB13_MOUSE1.259e-1434.78DnaJ homolog subfamily B member 13 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00954 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00954 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623874 ID=BQ623874; Name=BQ623874; organism=Citrus sinensis; type=EST; length=703bp
ATGAAGCGCCCGACACTGTCACAGGTGACATTGTATTTGTTCTACAACAG
AAAGAGCACCCGAAATTTAAGCGAAAGGGTGATGACCTATTTGTTGAGCA
CACCCTGTCACTGACAGAAGCTCTCTGTGGCTTTCAATTTGTAATAACTC
ATTTGGATGGCCGGCAACTCCTCATCAAATCCCAGCCTGGGGAAGTAGTC
AAGCCGGACCAATTCAAGGCCATAAATGATGAAGGAATGCCTATGTATCA
GAGGCCATTTATGAGGGGCAAACTGTACATTCATTTCACTGTTGACTTCC
CTGAGTCACTGAGCCCAGACCAGTGCAAGATGCTGGAGACCGTACTACCT
CCAAGGACCTCAGTCCAGCTCACCGATATGGAACTGGATGAGTGTGAAGA
AACAACCCTGCATGATGTGAACATTGAGGAGGAAATGCGAAGGAAGCAAC
AAGCAGCTCAGGAGGCATACGATGAAGATGACGATATGCAAGGTGGTGCC
CAGAGAGTGCAGTGTGCTCAGCAGTGATGATGTAGAAGAAAAGGGGTGGC
CTGATTTAGTATTTTCATTGTTTGGGAGAAAAAGATTCTCAACATATTTA
TTTTCTGTTATAGGCTTTAGAGGTTCTAGTTTTGGTTTGTCTGTCTTTAT
TGTTATGTTTTCTGATAACTGACTATGTATGGAATTCTAGCGTTGCACCC
TTC
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