BQ623912

Overview
NameBQ623912
Unique NameBQ623912
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length409
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623912 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.832e-11
Identity = 34/102 (33.33%), Postives = 56/102 (54.90%), Query Frame = 1
Query:   79 PDAIPDPKAVQYVRN----------DRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 354
            PD   DP  V  +RN          D+ +P+  DN +++ I   +G++ VD +LA+D +TR  V + A +  +F ++F RA+  +   + LTG  GEIR+ C
Sbjct:  208 PDPSMDPALVTSLRNTCRNSATAALDQSSPLRFDNQFFKQIRKRRGVLQVDQRLASDPQTRGIVARYANNNAFFKRQFVRAMVKMGAVDVLTGRNGEIRRNC 309          
BLAST of BQ623912 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.832e-11
Identity = 42/113 (37.17%), Postives = 55/113 (48.67%), Query Frame = 1
Query:   31 DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-----ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 354
            DP LN  ++  +  +CP        V +   D  TP V DN YY N+ + KGL+  D +L     ATD  T P V+  A     FF  F  A+  +    PLTGT+GEIR  C
Sbjct:  222 DPTLNTTYLQTLRQQCPLNGNQSVLVDF---DLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATD--TIPLVRSFADGTQKFFNAFVEAMNRMGNITPLTGTQGEIRLNC 329          
The following BLAST results are available for this feature:
BLAST of BQ623912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
PER57_ARATH9.832e-1133.33Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]
PER1B_ARMRU9.832e-1137.17Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00992 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00992 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623912 ID=BQ623912; Name=BQ623912; organism=Citrus sinensis; type=EST; length=409bp
AAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGCACTGAACCCTGA
CCATGTTCCGCATATGCTCCATAAGTGTCCTGATGCAATCCCAGACCCCA
AGGCTGTTCAGTATGTGAGGAATGACCGTGGCACACCCATGGTGCTGGAC
AACAACTACTATAGGAACATATTGGACAACAAGGGCTTGATGATGGTTGA
TCATCAGCTAGCCACCGACAAGAGGACAAGACCTTATGTTAAGAAGATGG
CCAAGAGTCAAGACTACTTCTTCAAGGAATTTTCAAGAGCCATTACTCTC
CTTTCTGAGAACAACCCTCTCACAGGTACAAAGGGTGAGATCCGAAAGGT
TTGCAATTCTTGCCAACAAGCTTCCACGACAAGTCCTAGCTAGCTAACAG
CTGCATTTA
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