BQ623918

Overview
NameBQ623918
Unique NameBQ623918
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length507
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623918 vs. ExPASy Swiss-Prot
Match: CALM_PLAFA (Calmodulin OS=Plasmodium falciparum PE=3 SV=4)

HSP 1 Score: 102.449 bits (254), Expect = 1.209e-21
Identity = 56/135 (41.48%), Postives = 83/135 (61.48%), Query Frame = 3
Query:   54 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 455
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++DTD +G I   EF T+  R       E EL EAF ++D+D +G ISA+EL  V+  LG K + +    MI+  D DGDG +N+EEF  MM
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEIDTDGNGTIDFPEFLTLMARKLKDTDTEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQINYEEFVKMM 146          
BLAST of BQ623918 vs. ExPASy Swiss-Prot
Match: CALM_PLAF7 (Calmodulin OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0323 PE=3 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 1.209e-21
Identity = 56/135 (41.48%), Postives = 83/135 (61.48%), Query Frame = 3
Query:   54 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 455
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++DTD +G I   EF T+  R       E EL EAF ++D+D +G ISA+EL  V+  LG K + +    MI+  D DGDG +N+EEF  MM
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEIDTDGNGTIDFPEFLTLMARKLKDTDTEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQINYEEFVKMM 146          
BLAST of BQ623918 vs. ExPASy Swiss-Prot
Match: CALM_DICDI (Calmodulin OS=Dictyostelium discoideum GN=calA PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 1.209e-21
Identity = 56/135 (41.48%), Postives = 82/135 (60.74%), Query Frame = 3
Query:   54 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 455
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN++EF  MM
Sbjct:   14 EFKEAFSLFDKDGDGSITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGNIDFPEFLTMMARKMQDTDTEEEIREAFKVFDKDGNGYISAAELRHVMTSLGEKLTNEEVDEMIREADLDGDGQVNYDEFVKMM 148          
BLAST of BQ623918 vs. ExPASy Swiss-Prot
Match: CALM_TETPY (Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4)

HSP 1 Score: 102.064 bits (253), Expect = 1.580e-21
Identity = 56/135 (41.48%), Postives = 83/135 (61.48%), Query Frame = 3
Query:   54 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 455
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF ++  R       E EL EAF ++D+D NGLISA EL  V+  LG K + +    MI+  D DGDG++N+EEF  MM
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGHINYEEFVRMM 146          
BLAST of BQ623918 vs. ExPASy Swiss-Prot
Match: CALM_SPIOL (Calmodulin OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.580e-21
Identity = 54/135 (40.00%), Postives = 82/135 (60.74%), Query Frame = 3
Query:   54 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 455
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF   + R       E EL+EAF ++D+D+NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  +M
Sbjct:   12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146          
BLAST of BQ623918 vs. ExPASy Swiss-Prot
Match: CALM_MEDSA (Calmodulin OS=Medicago sativa GN=CAL1 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.580e-21
Identity = 54/135 (40.00%), Postives = 82/135 (60.74%), Query Frame = 3
Query:   54 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 455
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF   + R       E EL+EAF ++D+D+NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  +M
Sbjct:   12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146          
BLAST of BQ623918 vs. ExPASy Swiss-Prot
Match: CALM_LILLO (Calmodulin OS=Lilium longiflorum PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.580e-21
Identity = 54/135 (40.00%), Postives = 82/135 (60.74%), Query Frame = 3
Query:   54 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 455
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF   + R       E EL+EAF ++D+D+NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  +M
Sbjct:   12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146          
BLAST of BQ623918 vs. ExPASy Swiss-Prot
Match: CALM_HORVU (Calmodulin OS=Hordeum vulgare GN=CAM PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.580e-21
Identity = 54/135 (40.00%), Postives = 82/135 (60.74%), Query Frame = 3
Query:   54 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 455
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF   + R       E EL+EAF ++D+D+NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  +M
Sbjct:   12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146          
BLAST of BQ623918 vs. ExPASy Swiss-Prot
Match: CALM_HELAN (Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 1.580e-21
Identity = 54/135 (40.00%), Postives = 82/135 (60.74%), Query Frame = 3
Query:   54 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 455
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF   + R       E EL+EAF ++D+D+NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  +M
Sbjct:   12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146          
BLAST of BQ623918 vs. ExPASy Swiss-Prot
Match: CALM_EUPCH (Calmodulin OS=Euphorbia characias PE=2 SV=4)

HSP 1 Score: 102.064 bits (253), Expect = 1.580e-21
Identity = 54/135 (40.00%), Postives = 82/135 (60.74%), Query Frame = 3
Query:   54 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 455
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF   + R       E EL+EAF ++D+D+NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  +M
Sbjct:   12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146          
The following BLAST results are available for this feature:
BLAST of BQ623918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 323
Match NameE-valueIdentityDescription
CALM_PLAFA1.209e-2141.48Calmodulin OS=Plasmodium falciparum PE=3 SV=4[more]
CALM_PLAF71.209e-2141.48Calmodulin OS=Plasmodium falciparum (isolate 3D7) ... [more]
CALM_DICDI1.209e-2141.48Calmodulin OS=Dictyostelium discoideum GN=calA PE=... [more]
CALM_TETPY1.580e-2141.48Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4[more]
CALM_SPIOL1.580e-2140.00Calmodulin OS=Spinacia oleracea PE=1 SV=2[more]
CALM_MEDSA1.580e-2140.00Calmodulin OS=Medicago sativa GN=CAL1 PE=2 SV=2[more]
CALM_LILLO1.580e-2140.00Calmodulin OS=Lilium longiflorum PE=2 SV=2[more]
CALM_HORVU1.580e-2140.00Calmodulin OS=Hordeum vulgare GN=CAM PE=2 SV=2[more]
CALM_HELAN1.580e-2140.00Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3[more]
CALM_EUPCH1.580e-2140.00Calmodulin OS=Euphorbia characias PE=2 SV=4[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01009 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01009 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623918 ID=BQ623918; Name=BQ623918; organism=Citrus sinensis; type=EST; length=507bp
CAGCAACGACGGAGGCAGATTCGAATAGGAAACAGCTAATAGTGAGCCCG
GAGGAGATGCAGAAGATCTTCAACCAGTTCGACGAGAACAAGGACGGCAA
GATCTCGCTGACGGAGCTGGCGACCGTTTTGAAATCAATGGGATCGAGCT
ACAAAGAGGAGGAGCTCGTCCGCGTCATGGAGGATCTCGATACCGACAAG
GACGGATTCATCAGCCTGTCGGAGTTCGAAACGATCTGCCGGACCTCCTC
TGGTGCCGCCGGCGAGGCCGAGCTCCGCGAGGCGTTTGATCTCTACGATC
AGGACAAGAACGGTTTGATTTCGGCGGAGGAGTTGAATTTGGTGTTGAAC
AGGCTCGGAATTAAGTGCTCGGTTGATGGATGTGTGGCGATGATTAAGCC
GGTGGATGCCGATGGTGATGGCAATGTGAATTTTGAAGAGTTTCGTTCGA
TGATGACTACTTCTCTTAAACCTGGTCCTGCGCCGTAGATTTTGGTTTCG
ACGGTGA
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