BQ623928

Overview
NameBQ623928
Unique NameBQ623928
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623928 vs. ExPASy Swiss-Prot
Match: VATA_STRPC (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=atpA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.489e-14
Identity = 41/91 (45.05%), Postives = 59/91 (64.84%), Query Frame = 1
Query:    1 DPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 273
            + ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+ NI+ F   A++A+  GA
Sbjct:  451 ESNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGA 541          
BLAST of BQ623928 vs. ExPASy Swiss-Prot
Match: VATA_STRPB (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=atpA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.489e-14
Identity = 41/91 (45.05%), Postives = 59/91 (64.84%), Query Frame = 1
Query:    1 DPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 273
            + ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+ NI+ F   A++A+  GA
Sbjct:  451 ESNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGA 541          
BLAST of BQ623928 vs. ExPASy Swiss-Prot
Match: VATA_STRP3 (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M3 GN=atpA PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 6.489e-14
Identity = 41/91 (45.05%), Postives = 59/91 (64.84%), Query Frame = 1
Query:    1 DPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 273
            + ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+ NI+ F   A++A+  GA
Sbjct:  451 ESNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGA 541          
BLAST of BQ623928 vs. ExPASy Swiss-Prot
Match: VATA_NATPD (V-type ATP synthase alpha chain OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=atpA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.489e-14
Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = 1
Query:    7 DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 282
            +F  +R  A +VL  ED+L EIVQLVGKDAL E  ++TLE A+ +RE +L QNAF   D +C   K+  M+  I HF + A +A++ G  ++
Sbjct:  455 EFPEVRQWAVDVLDEEDELQEIVQLVGKDALPEDQQLTLEVARYIREAWLQQNAFHDVDTYCEPEKTYQMLTAIQHFNDEAFEALDAGVPVE 546          
BLAST of BQ623928 vs. ExPASy Swiss-Prot
Match: VATA_METVS (V-type ATP synthase alpha chain OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=atpA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.489e-14
Identity = 44/110 (40.00%), Postives = 68/110 (61.82%), Query Frame = 1
Query:    7 DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFY 336
            D+  +R +A  +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+A+   D +C   K   M++ I+ FY  A  AV KGA  D  K++   +K  +  + Y
Sbjct:  452 DWRVLRDEAMGLLQKEAELQEIVQLVGPDALPDRERVILEIARILREDFLQQDAYHEVDSYCSPKKQYNMLKVIMTFYKKALDAVAKGA--DPAKLSAVSVKGDIARMKY 559          
BLAST of BQ623928 vs. ExPASy Swiss-Prot
Match: VATA_METMP (V-type ATP synthase alpha chain OS=Methanococcus maripaludis GN=atpA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.489e-14
Identity = 40/93 (43.01%), Postives = 60/93 (64.52%), Query Frame = 1
Query:    7 DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDG 285
            D+ ++R +A  +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+A+   D +C   K   M++ I+ FY     AV KGA   G
Sbjct:  452 DWRSLRDEAMSLLQKEAELQEIVQLVGPDALPDRERVILEIARMLREDFLQQDAYHEVDSYCSPLKQYNMLKIIMTFYKKGLDAVAKGADPAG 544          
BLAST of BQ623928 vs. ExPASy Swiss-Prot
Match: VATA_METM5 (V-type ATP synthase alpha chain OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=atpA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.489e-14
Identity = 40/93 (43.01%), Postives = 61/93 (65.59%), Query Frame = 1
Query:    7 DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDG 285
            D+ ++R +A  +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+A+   D +C   K   M++ I+ +Y  A  AV KGA   G
Sbjct:  452 DWRSLRDEAMTLLQKEAELQEIVQLVGPDALPDRERVILEIARMLREDFLQQDAYHEVDSYCSPLKQYNMLKIIMTYYTKALDAVAKGADPAG 544          
BLAST of BQ623928 vs. ExPASy Swiss-Prot
Match: VATA_AERPE (V-type ATP synthase alpha chain OS=Aeropyrum pernix GN=atpA PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 6.489e-14
Identity = 47/142 (33.10%), Postives = 77/142 (54.23%), Query Frame = 1
Query:   22 RTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALED 447
            R +A ++L RE +L EIV+LVG + L E DK+ LETA+L+++ +L QNAF P D F    K   +++ I+  +  + + +EKG       +T   I   LG L+  +V  KF  P +       + +K+ E      +AL++
Sbjct:  466 RDEAMDILLRESELQEIVRLVGTEGLDEKDKMVLETARLIKDGFLKQNAFDPIDAFATPQKQFRLLKMIMDIHRKSLELIEKG-------VTTQQILQALGRLYIDIVKAKFTIPND-------QLEKIDEIRDRALKALDE 593          
BLAST of BQ623928 vs. ExPASy Swiss-Prot
Match: VATA_STRPM (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M28 GN=atpA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.474e-14
Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = 1
Query:   25 TKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 273
            T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+ NI+ F   A++A+  GA
Sbjct:  459 TRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGA 541          
BLAST of BQ623928 vs. ExPASy Swiss-Prot
Match: VATA_STRPG (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=atpA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.474e-14
Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = 1
Query:   25 TKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 273
            T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+ NI+ F   A++A+  GA
Sbjct:  459 TRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGA 541          
The following BLAST results are available for this feature:
BLAST of BQ623928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
VATA_STRPC6.489e-1445.05V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_STRPB6.489e-1445.05V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_STRP36.489e-1445.05V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_NATPD6.489e-1444.57V-type ATP synthase alpha chain OS=Natronomonas ph... [more]
VATA_METVS6.489e-1440.00V-type ATP synthase alpha chain OS=Methanococcus v... [more]
VATA_METMP6.489e-1443.01V-type ATP synthase alpha chain OS=Methanococcus m... [more]
VATA_METM56.489e-1443.01V-type ATP synthase alpha chain OS=Methanococcus m... [more]
VATA_AERPE6.489e-1433.10V-type ATP synthase alpha chain OS=Aeropyrum perni... [more]
VATA_STRPM8.474e-1448.19V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_STRPG8.474e-1448.19V-type ATP synthase alpha chain OS=Streptococcus p... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01019 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01019 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623928 ID=BQ623928; Name=BQ623928; organism=Citrus sinensis; type=EST; length=622bp
GATCCGGATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAG
AGAAGATGACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGG
CTGAAGGAGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGAC
TATCTTGCTCAGAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTA
CAAGTCTGTTTGGATGATGCGTAACATTATCCATTTCTATAACTTGGCCA
ATCAGGCCGTAGAGAAAGGAGCTGGTATGGATGGTCAGAAGATAACTTAC
ACCCTTATCAAGCATCGGCTGGGAGATCTATTTTACAGATTAGTATCACA
GAAGTTTGAGGACCCAGCAGAAGGAGAACCAGCTCTGGTTGCTAAATTCA
AAAAGCTGCATGAGGATCTGACCGCTGGTTTCCGCGCCCTCGAGGATGAA
ACTCGATGATTGAAAGTGTCAAGTTAGATTCTTTGTAGTCCCAGCGGCAC
CTCTGATCTTACGGTAACAACAGTTGGCTTCTCGATGTTCCATTGAATGG
AGAACCAAAATGTTGGTGGGTCCATGTTATGCCCTTTTGCAGTGCTTGTT
TGGCCTTCTAGTTCAGGGTGGG
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