C21829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of C21829 vs. ExPASy Swiss-Prot
Match: EF1A_THEPD (Elongation factor 1-alpha OS=Thermofilum pendens (strain Hrk 5) GN=tuf PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.009e-11 Identity = 27/58 (46.55%), Postives = 42/58 (72.41%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHXIYKLGGIXKRVIXRFEKEASXMNKGXFKYAW 251 M ++K H+N+VVIGH+D GKST G +Y++G + R+I ++E+EA M + +KYAW Sbjct: 1 MSEKKPHLNLVVIGHIDHGKSTLMGRLLYEIGAVDPRLIQQYEEEAKKMGRETWKYAW 58
BLAST of C21829 vs. ExPASy Swiss-Prot
Match: EF1A_METHJ (Elongation factor 1-alpha OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=tuf PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.009e-11 Identity = 28/58 (48.28%), Postives = 38/58 (65.52%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHXIYKLGGIXKRVIXRFEKEASXMNKGXFKYAW 251 M EK HIN+ VIGH+D GKSTT G +Y+ G + +I +++KEA KG F +AW Sbjct: 1 MATEKPHINLAVIGHIDHGKSTTVGRLMYEAGAVPAHIIEQYKKEAESKGKGSFAFAW 58
BLAST of C21829 vs. ExPASy Swiss-Prot
Match: EF1A_STAMF (Elongation factor 1-alpha OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=tuf PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.846e-11 Identity = 29/58 (50.00%), Postives = 38/58 (65.52%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHXIYKLGGIXKRVIXRFEKEASXMNKGXFKYAW 251 M K H+N+VVIGHVD GKST GH +Y+LG + ++ I E+EA K FK+AW Sbjct: 1 MSSGKPHLNLVVIGHVDHGKSTLVGHILYRLGLVDQKTIQMLEEEAKKRGKESFKFAW 58
BLAST of C21829 vs. ExPASy Swiss-Prot
Match: EF1A_METPE (Elongation factor 1-alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=tuf PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.972e-11 Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHXIYKLGGIXKRVIXRFEKEASXMNKGXFKYAW 251 M +K H+N+ VIGH+D GKSTT G +++ G + +I F KEA KG F++AW Sbjct: 1 MANDKPHMNLAVIGHIDHGKSTTVGRLMFETGAVPAHIIENFRKEAESKGKGSFEFAW 58
BLAST of C21829 vs. ExPASy Swiss-Prot
Match: EF1A_METMJ (Elongation factor 1-alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=tuf PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.972e-11 Identity = 27/58 (46.55%), Postives = 37/58 (63.79%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHXIYKLGGIXKRVIXRFEKEASXMNKGXFKYAW 251 M EK H+N+ VIGH+D GKSTT G +++ G + +I F KEA KG F++AW Sbjct: 1 MAAEKPHMNLAVIGHIDHGKSTTVGRLLFETGTVPPHIIESFRKEAESKGKGSFEFAW 58 The following BLAST results are available for this feature:
BLAST of C21829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 105
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Sequences
The
following sequences are available for this feature:
EST sequence >C21829 ID=C21829; Name=C21829; organism=Citrus sinensis; type=EST; length=259bpback to top |