C21841
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of C21841 vs. ExPASy Swiss-Prot
Match: MDHM_RAT (Malate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Mdh2 PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 7.078e-17 Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 1 Query: 10 ISHMDTNVVVRGFXGQQQLXDALTGMDIVIIPAGVPRKPGMTRDDLXNINAGIVXTLCEGIAKCCPKXIV 219 +SH++T V+G+ G +QL D L G D+V+IPAGVPRKPGMTRDDL N NA IV TL A+ CP+ ++ Sbjct: 68 LSHIETRANVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMI 137
BLAST of C21841 vs. ExPASy Swiss-Prot
Match: MDHP_ARATH (Malate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=At3g47520 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.059e-16 Identity = 40/73 (54.79%), Postives = 51/73 (69.86%), Query Frame = 1 Query: 10 ISHMDTNVVVRGFXGQQQLXDALTGMDIVIIPAGVPRKPGMTRDDLXNINAGIVXTLCEGIAKCCPKXIVNSI 228 +SH +T VR F G +L D L +++V+IPAGVPRKPGMTRDDL NINA IV TL E +A+ CP ++ I Sbjct: 126 LSHCNTPSQVRDFTGPSELADCLKDVNVVVIPAGVPRKPGMTRDDLFNINANIVKTLVEAVAENCPNAFIHII 198
BLAST of C21841 vs. ExPASy Swiss-Prot
Match: MDHM_MACFA (Malate dehydrogenase, mitochondrial OS=Macaca fascicularis GN=MDH2 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.059e-16 Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 1 Query: 10 ISHMDTNVVVRGFXGQQQLXDALTGMDIVIIPAGVPRKPGMTRDDLXNINAGIVXTLCEGIAKCCPKXIV 219 +SH++T VV+G+ G +QL D L G D+V+IPAGVPRKPGMTRDDL N NA IV TL A+ P+ ++ Sbjct: 68 LSHIETKAVVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLAAACAQHRPEAMI 137
BLAST of C21841 vs. ExPASy Swiss-Prot
Match: MDH_ALTMD (Malate dehydrogenase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=mdh PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.588e-16 Identity = 43/73 (58.90%), Postives = 50/73 (68.49%), Query Frame = 1 Query: 10 ISHMDTNVVVRGFXGQQQLXDALTGMDIVIIPAGVPRKPGMTRDDLXNINAGIVXTLCEGIAKCCPKXIVNSI 228 +SH+ T V V G G+ L DALTG D+V+IPAG+PRKPGM R DL NINAGIV L EG+A CP V I Sbjct: 46 LSHIPTAVKVTGH-GKDDLADALTGADVVLIPAGMPRKPGMDRSDLFNINAGIVKNLIEGVADNCPNACVGII 117
BLAST of C21841 vs. ExPASy Swiss-Prot
Match: MDH_PSEHT (Malate dehydrogenase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=mdh PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.022e-15 Identity = 42/73 (57.53%), Postives = 50/73 (68.49%), Query Frame = 1 Query: 10 ISHMDTNVVVRGFXGQQQLXDALTGMDIVIIPAGVPRKPGMTRDDLXNINAGIVXTLCEGIAKCCPKXIVNSI 228 +SH+ T V V GF G L +AL DIV+IPAG+PRKPGM R DL N+NAGI+ TL EGI CPK +V I Sbjct: 46 LSHIPTAVKVAGF-GADALNEALKDADIVLIPAGMPRKPGMDRADLFNVNAGIIKTLAEGIVASCPKALVGII 117
BLAST of C21841 vs. ExPASy Swiss-Prot
Match: MDH_IDILO (Malate dehydrogenase OS=Idiomarina loihiensis GN=mdh PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.022e-15 Identity = 42/73 (57.53%), Postives = 50/73 (68.49%), Query Frame = 1 Query: 10 ISHMDTNVVVRGFXGQQQLXDALTGMDIVIIPAGVPRKPGMTRDDLXNINAGIVXTLCEGIAKCCPKXIVNSI 228 +SH+ T+V V GF G+ L AL G DIV+IPAGVPRKPGM R DL N+NAGIV L +G+A CP V I Sbjct: 46 LSHIPTDVKVTGF-GKDDLASALVGSDIVLIPAGVPRKPGMDRSDLFNMNAGIVKNLVQGVADNCPNACVGII 117
BLAST of C21841 vs. ExPASy Swiss-Prot
Match: MDH_PSEA6 (Malate dehydrogenase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=mdh PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.335e-15 Identity = 41/67 (61.19%), Postives = 49/67 (73.13%), Query Frame = 1 Query: 10 ISHMDTNVVVRGFXGQQQLXDALTGMDIVIIPAGVPRKPGMTRDDLXNINAGIVXTLCEGIAKCCPK 210 +SH+ T+V V GF G+ L ALTG DIV+IPAGVPRKPGM R DL NINAGIV L + +A CP+ Sbjct: 46 LSHIPTDVKVEGF-GKDDLAKALTGSDIVLIPAGVPRKPGMDRSDLFNINAGIVRNLVDSVADNCPE 111
BLAST of C21841 vs. ExPASy Swiss-Prot
Match: MDHM_CHLRE (Malate dehydrogenase, mitochondrial OS=Chlamydomonas reinhardtii PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.884e-15 Identity = 40/73 (54.79%), Postives = 51/73 (69.86%), Query Frame = 1 Query: 10 ISHMDTNVVVRGFXGQQQLXDALTGMDIVIIPAGVPRKPGMTRDDLXNINAGIVXTLCEGIAKCCPKXIVNSI 228 +SH++T V+GF + L +AL G D+VIIPAGVPRKPGMTRDDL INAGIV L + + CP ++N I Sbjct: 106 VSHINTKAQVKGFD-KDGLAEALRGCDLVIIPAGVPRKPGMTRDDLFKINAGIVRDLVTAVGQHCPGAVLNII 177
BLAST of C21841 vs. ExPASy Swiss-Prot
Match: MDH_SHEFN (Malate dehydrogenase OS=Shewanella frigidimarina (strain NCIMB 400) GN=mdh PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.072e-15 Identity = 41/73 (56.16%), Postives = 50/73 (68.49%), Query Frame = 1 Query: 10 ISHMDTNVVVRGFXGQQQLXDALTGMDIVIIPAGVPRKPGMTRDDLXNINAGIVXTLCEGIAKCCPKXIVNSI 228 +SH+ T+V V+GF GQ DAL G D+V++ AGV RKPGM R DL NINAGIV L E +A CPK +V I Sbjct: 46 LSHIPTDVEVKGFAGQDPT-DALVGADVVLMSAGVARKPGMDRSDLFNINAGIVRNLMEKVAVTCPKALVGII 117
BLAST of C21841 vs. ExPASy Swiss-Prot
Match: MDHM_CAEEL (Probable malate dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=mdh-1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.625e-15 Identity = 37/70 (52.86%), Postives = 48/70 (68.57%), Query Frame = 1 Query: 10 ISHMDTNVVVRGFXGQQQLXDALTGMDIVIIPAGVPRKPGMTRDDLXNINAGIVXTLCEGIAKCCPKXIV 219 +SH+D+N V G ++L A+ D+++IPAGVPRKPGMTRDDL N NAGIV L IAK PK ++ Sbjct: 72 LSHIDSNAKVTAHTGPKELYAAVENADVIVIPAGVPRKPGMTRDDLFNTNAGIVRDLAAVIAKASPKALI 141 The following BLAST results are available for this feature:
BLAST of C21841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >C21841 ID=C21841; Name=C21841; organism=Citrus sinensis; type=EST; length=229bpback to top |