C21854
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHOQ_RAT (Rho-related GTP-binding protein RhoQ OS=Rattus norvegicus GN=Rhoq PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.398e-17 Identity = 37/76 (48.68%), Postives = 56/76 (73.68%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRASYE 232 + C+L+ Y ++ FP +Y+PTVFD+++ + V G LGL+DTAGQEDY RLRPLSY D+F + FS+++ AS++ Sbjct: 22 KTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQ 97
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHOQ_MOUSE (Rho-related GTP-binding protein RhoQ OS=Mus musculus GN=Rhoq PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 1.398e-17 Identity = 37/76 (48.68%), Postives = 56/76 (73.68%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRASYE 232 + C+L+ Y ++ FP +Y+PTVFD+++ + V G LGL+DTAGQEDY RLRPLSY D+F + FS+++ AS++ Sbjct: 22 KTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQ 97
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHOQ_HUMAN (Rho-related GTP-binding protein RhoQ OS=Homo sapiens GN=RHOQ PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 1.398e-17 Identity = 37/76 (48.68%), Postives = 56/76 (73.68%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRASYE 232 + C+L+ Y ++ FP +Y+PTVFD+++ + V G LGL+DTAGQEDY RLRPLSY D+F + FS+++ AS++ Sbjct: 22 KTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQ 97
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHOJ_MOUSE (Rho-related GTP-binding protein RhoJ OS=Mus musculus GN=Rhoj PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 1.826e-17 Identity = 37/75 (49.33%), Postives = 55/75 (73.33%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRASY 229 + C+L+ Y ++ FP +Y+PTVFD+++ V G LGL+DTAGQEDY++LRPLSY D+F + FS+++ ASY Sbjct: 34 KTCLLMSYANDAFPEEYVPTVFDHYAVTVTVGGKQHLLGLYDTAGQEDYNQLRPLSYPNTDVFLICFSVVNPASY 108
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHOJ_HUMAN (Rho-related GTP-binding protein RhoJ OS=Homo sapiens GN=RHOJ PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.826e-17 Identity = 37/75 (49.33%), Postives = 55/75 (73.33%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRASY 229 + C+L+ Y ++ FP +Y+PTVFD+++ V G LGL+DTAGQEDY++LRPLSY D+F + FS+++ ASY Sbjct: 34 KTCLLMSYANDAFPEEYVPTVFDHYAVTVTVGGKQHLLGLYDTAGQEDYNQLRPLSYPNTDVFLICFSVVNPASY 108
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHO1_KLULA (GTP-binding protein Rho1 OS=Kluyveromyces lactis GN=RHO1 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.938e-17 Identity = 37/69 (53.62%), Postives = 49/69 (71.01%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSL 211 + C+LI + KFP Y+PTVFDN+ A+ VDG V L LWDTAGQEDY RLRPLSY +++ + +S+ Sbjct: 25 KTCLLIVFAKGKFPQVYVPTVFDNYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICYSI 93
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHO1_ASHGO (GTP-binding protein RHO1 OS=Ashbya gossypii GN=RHO1 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.938e-17 Identity = 37/69 (53.62%), Postives = 49/69 (71.01%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSL 211 + C+LI + KFP Y+PTVFDN+ A+ VDG V L LWDTAGQEDY RLRPLSY +++ + +S+ Sbjct: 24 KTCLLIVFAKGKFPQVYVPTVFDNYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICYSI 92
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHO1_CANAL (GTP-binding protein RHO1 OS=Candida albicans GN=RHO1 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.061e-17 Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRASYETFL 241 + C+LI ++ FP Y+PTVF+N+ A+ VDG V L LWDTAGQEDY RLRPLSY +++ + FS+ S S + L Sbjct: 22 KTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRKVELALWDTAGQEDYDRLRPLSYPDSNVILICFSVDSPDSLDNVL 100
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: CRL1_CANAL (GTP-binding RHO-like protein OS=Candida albicans GN=CRL1 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.183e-16 Identity = 39/77 (50.65%), Postives = 54/77 (70.13%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNF-SANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRASYE 232 + C+L+ YT NKFP+ Y+PTVF+N+ +A + +G V L LWDTAGQE+Y RLRPLSY DI + F++ + S E Sbjct: 88 KTCLLLAYTQNKFPSIYVPTVFENYVTAVQSPNGKTVELALWDTAGQEEYDRLRPLSYPDVDILLVCFAVDNEVSLE 164
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHO1_YEAST (GTP-binding protein RHO1 OS=Saccharomyces cerevisiae GN=RHO1 PE=1 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 2.019e-16 Identity = 36/69 (52.17%), Postives = 50/69 (72.46%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSL 211 + C+LI ++ +FP Y+PTVF+N+ A+ VDG V L LWDTAGQEDY RLRPLSY +++ + FS+ Sbjct: 23 KTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSI 91 The following BLAST results are available for this feature:
BLAST of C21854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >C21854 ID=C21854; Name=C21854; organism=Citrus sinensis; type=EST; length=282bpback to top |