C21854
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RACL_DICDI (Rho-related protein racL OS=Dictyostelium discoideum GN=racL PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.497e-16 Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRASY 229 + +LI + S +FP DY PTVFDNFS NLGL+DTAGQED+ RLRPL Y D+F + +S+I+ SY Sbjct: 16 KTSLLIAFASGEFPRDYQPTVFDNFSTLYMFQNKAYNLGLFDTAGQEDFDRLRPLGYNDTDLFLICYSVINPPSY 90
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHOA_EMENI (GTP-binding protein rhoA OS=Emericella nidulans GN=rhoA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.873e-16 Identity = 37/76 (48.68%), Postives = 51/76 (67.11%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRASYE 232 + C+LI ++ FP Y+PTVF+N+ A+ VDG V L LWDTAGQEDY RLRPLSY + + + F++ S S + Sbjct: 18 KTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLD 93
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHO1_SCHPO (GTP-binding protein rho1 OS=Schizosaccharomyces pombe GN=rho1 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.671e-16 Identity = 37/76 (48.68%), Postives = 51/76 (67.11%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRASYE 232 + C+LI ++ FP Y+PTVF+N+ A+ VDG V L LWDTAGQEDY RLRPLSY + + + F++ S S + Sbjct: 19 KTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLD 94
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHO5_YEAST (GTP-binding protein RHO5 OS=Saccharomyces cerevisiae GN=RHO5 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 7.864e-16 Identity = 42/105 (40.00%), Postives = 53/105 (50.48%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAV------------------------------DGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRASY 229 + +LI YT+N FPTDY+PTVFDN+S A+ D + + LWDTAGQEDY RLRPL Y DIF + FS+ AS+ Sbjct: 16 KTSLLISYTTNSFPTDYVPTVFDNYSTTIAIPNGTASSPLELDNGNDKRGSLSSASSSPSTDRKLYKINLWDTAGQEDYDRLRPLCYPQTDIFLICFSVSEHASF 120 HSP 2 Score: 22.7126 bits (47), Expect = 7.864e-16 Identity = 7/12 (58.33%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 232 NVLKKWMPELRR 267 NV +KW+PEL++ Sbjct: 122 NVTEKWLPELKQ 133
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHO5_SCHPO (GTP-binding protein rho5 OS=Schizosaccharomyces pombe GN=rho5 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.002e-15 Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSL 211 + C+LI ++ FP Y+PTVF+N+ A+ VDG + L LWDTAGQEDY RLRPLSY + + + FS+ Sbjct: 19 KTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDYDRLRPLSYPDSHVVLICFSV 87
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RACG_DICDI (Rho-related protein racG OS=Dictyostelium discoideum GN=racG PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.308e-15 Identity = 40/81 (49.38%), Postives = 52/81 (64.20%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRASYETFLRS 247 + ML+ YTSN +Y PTVFDN+S + NL LWDTAGQE++S+LR LSY D+F L FSLI+ +S+ L S Sbjct: 16 KTSMLLSYTSNSISNEYQPTVFDNYSTLLMHNKKPYNLSLWDTAGQEEFSKLRRLSYPQTDVFLLCFSLINPSSFSNILDS 96
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHO2_SCHPO (GTP-binding protein rho2 OS=Schizosaccharomyces pombe GN=rho2 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.232e-15 Identity = 37/76 (48.68%), Postives = 51/76 (67.11%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRASYE 232 + +L +T FPT+Y+PTVF+N+ ++ VDG V L LWDTAGQE+Y RLRP+SY A I + F++ S S E Sbjct: 21 KTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEYERLRPMSYAKAHIILVGFAIDSPDSLE 96
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHO4_ASHGO (GTP-binding protein RHO4 OS=Ashbya gossypii GN=RHO4 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.494e-15 Identity = 35/75 (46.67%), Postives = 50/75 (66.67%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANX-AVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRAS 226 + +L+ YT +FP DY+PT+F+N+ N G ++ L LWDTAGQE+YSRLRPLSY DI + ++ +R S Sbjct: 65 KTSLLMSYTQGQFPEDYVPTIFENYVTNIEGPRGKVIELALWDTAGQEEYSRLRPLSYGDVDIVMVCYAADNRTS 139
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHOV_RAT (Rho-related GTP-binding protein RhoV OS=Rattus norvegicus GN=Rhov PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.092e-14 Identity = 33/76 (43.42%), Postives = 49/76 (64.47%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRASYE 232 ++ +++ YT N +P+ Y PT D FS VDG+ V + LWDTAGQED+ RLR L Y D+F FS++ +S++ Sbjct: 44 KSSLIVSYTCNGYPSRYRPTALDTFSVQVLVDGAPVRIELWDTAGQEDFDRLRSLCYPDTDVFLACFSVVQPSSFQ 119 HSP 2 Score: 22.3274 bits (46), Expect = 1.092e-14 Identity = 6/11 (54.55%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 232 NVLKKWMPELR 264 N+ +KW+PE+R Sbjct: 120 NITEKWLPEIR 130
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHOV_MOUSE (Rho-related GTP-binding protein RhoV OS=Mus musculus GN=Rhov PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.419e-14 Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRASYE 232 ++ +++ YT N +P Y PT D FS VDG+ V + LWDTAGQED+ RLR L Y D+F FS++ +S++ Sbjct: 44 KSSLIVSYTCNGYPARYRPTALDTFSVQVLVDGAPVRIELWDTAGQEDFDRLRSLCYPDTDVFLACFSVVQPSSFQ 119 HSP 2 Score: 22.3274 bits (46), Expect = 1.419e-14 Identity = 6/11 (54.55%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 232 NVLKKWMPELR 264 N+ +KW+PE+R Sbjct: 120 NITEKWLPEIR 130 The following BLAST results are available for this feature:
BLAST of C21854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >C21854 ID=C21854; Name=C21854; organism=Citrus sinensis; type=EST; length=282bpback to top |