C21854
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHOV_HUMAN (Rho-related GTP-binding protein RhoV OS=Homo sapiens GN=RHOV PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.419e-14 Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRASYE 232 ++ +++ YT N +P Y PT D FS VDG+ V + LWDTAGQED+ RLR L Y D+F FS++ +S++ Sbjct: 44 KSSLIVSYTCNGYPARYRPTALDTFSVQVLVDGAPVRIELWDTAGQEDFDRLRSLCYPDTDVFLACFSVVQPSSFQ 119 HSP 2 Score: 22.3274 bits (46), Expect = 1.419e-14 Identity = 6/11 (54.55%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 232 NVLKKWMPELR 264 N+ +KW+PE+R Sbjct: 120 NITEKWLPEIR 130
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHO1_ENTHI (Ras-like GTP-binding protein RHO1 OS=Entamoeba histolytica GN=RHO1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.447e-14 Identity = 34/76 (44.74%), Postives = 50/76 (65.79%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRASYE 232 + C+L+ ++ + PT Y+PTVF+NFS L LWDTAGQE+Y RLRPLSY +D+ L F++ +R S++ Sbjct: 33 KTCLLLAFSKGEIPTAYVPTVFENFSHVMKYKNEEFILDLWDTAGQEEYDRLRPLSYADSDVVLLCFAVNNRTSFD 108
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHO4_SCHPO (GTP-binding protein rho4 OS=Schizosaccharomyces pombe GN=rho4 PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 3.132e-14 Identity = 34/76 (44.74%), Postives = 50/76 (65.79%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAV--DGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRAS 226 + C+LI ++S FP Y+PTVF+N+ + + ++ L LWDTAGQE+Y RLRPLSY +++ L FS+ AS Sbjct: 27 KTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQEEYDRLRPLSYPNSNVILLCFSIDCPAS 102 HSP 2 Score: 22.3274 bits (46), Expect = 3.132e-14 Identity = 10/23 (43.48%), Postives = 14/23 (60.87%), Query Frame = 1 Query: 202 FLIN**GKL*NVLKKWMPELRRF 270 F I+ L NV +KW PE++ F Sbjct: 95 FSIDCPASLNNVTEKWYPEVQHF 117
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHOV_BOVIN (Rho-related GTP-binding protein RhoV OS=Bos taurus GN=Rhov PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.045e-14 Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRASYE 232 ++ +++ YT N +P Y PT D FS VDG+ V + LWDTAGQED RLR L Y D+F FS++ +S++ Sbjct: 44 KSSLIVSYTCNGYPARYRPTALDTFSVQVLVDGAPVRIELWDTAGQEDLDRLRSLCYPDTDVFLACFSVVQPSSFQ 119 HSP 2 Score: 22.3274 bits (46), Expect = 4.045e-14 Identity = 6/11 (54.55%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 232 NVLKKWMPELR 264 N+ +KW+PE+R Sbjct: 120 NITEKWLPEIR 130
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHO2_YEAST (GTP-binding protein RHO2 OS=Saccharomyces cerevisiae GN=RHO2 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 4.209e-14 Identity = 35/69 (50.72%), Postives = 46/69 (66.67%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSL 211 + +L +T KFP Y PTVF+N+ + VDG V+L LWDTAGQE+Y RLRP SY ADI + F++ Sbjct: 20 KTSLLYVFTLGKFPEQYHPTVFENYVTDCRVDGIKVSLTLWDTAGQEEYERLRPFSYSKADIILIGFAV 88
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHOC_EMENI (GTP-binding protein rhoC OS=Emericella nidulans GN=rhoC PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 9.377e-14 Identity = 36/81 (44.44%), Postives = 48/81 (59.26%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAV--DGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRASYETFL 241 + C+LI Y+ FP Y+PTVF+N+ G V L LWDTAGQE+Y RLRPLSY D+ + F++ AS E + Sbjct: 82 KTCLLISYSQGYFPEKYVPTVFENYITQTLHRRSGKTVELALWDTAGQEEYDRLRPLSYPETDLLFVCFAIDCPASLENVM 162
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHOF_BOVIN (Rho-related GTP-binding protein RhoF OS=Bos taurus GN=RHOF PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 5.559e-13 Identity = 31/79 (39.24%), Postives = 49/79 (62.03%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRASYETFL 241 + +L+ Y+ FP Y P+VF+ ++A+ V V L L+DTAGQEDY RLRPLSY+ + + + +++ SY+ L Sbjct: 36 KTSLLMVYSQGSFPEHYAPSVFEKYTASVTVGSKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVL 114 HSP 2 Score: 21.9422 bits (45), Expect = 5.559e-13 Identity = 8/13 (61.54%), Postives = 9/13 (69.23%), Query Frame = 1 Query: 232 NVLKKWMPELRRF 270 NVL KW PE+ F Sbjct: 112 NVLIKWFPEVTHF 124
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHOF_HUMAN (Rho-related GTP-binding protein RhoF OS=Homo sapiens GN=RHOF PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 5.563e-13 Identity = 31/79 (39.24%), Postives = 49/79 (62.03%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRASYETFL 241 + +L+ Y+ FP Y P+VF+ ++A+ V V L L+DTAGQEDY RLRPLSY+ + + + +++ SY+ L Sbjct: 32 KTSLLMVYSQGSFPEHYAPSVFEKYTASVTVGSKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVL 110 HSP 2 Score: 21.9422 bits (45), Expect = 5.563e-13 Identity = 8/13 (61.54%), Postives = 9/13 (69.23%), Query Frame = 1 Query: 232 NVLKKWMPELRRF 270 NVL KW PE+ F Sbjct: 108 NVLIKWFPEVTHF 120
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHOD_HUMAN (Rho-related GTP-binding protein RhoD OS=Homo sapiens GN=RHOD PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 7.938e-13 Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRASYE 232 + +L+ + FP Y PTVF+ + N V G V+L +WDTAGQ+DY RLRPL Y A + L F + S S++ Sbjct: 30 KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFD 105
BLAST of C21854 vs. ExPASy Swiss-Prot
Match: RHOF_MOUSE (Rho-related GTP-binding protein RhoF OS=Mus musculus GN=Rhof PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 9.385e-13 Identity = 31/79 (39.24%), Postives = 48/79 (60.76%), Query Frame = 2 Query: 5 RACMLIXYTSNKFPTDYIPTVFDNFSANXAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFXLAFSLISRASYETFL 241 + +L+ Y FP Y P+VF+ ++A+ V V L L+DTAGQEDY RLRPLSY+ + + + +++ SY+ L Sbjct: 32 KTSLLMVYCQGSFPEHYAPSVFEKYTASVTVGNKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVL 110 HSP 2 Score: 21.9422 bits (45), Expect = 9.385e-13 Identity = 8/13 (61.54%), Postives = 9/13 (69.23%), Query Frame = 1 Query: 232 NVLKKWMPELRRF 270 NVL KW PE+ F Sbjct: 108 NVLIKWFPEVTHF 120 The following BLAST results are available for this feature:
BLAST of C21854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >C21854 ID=C21854; Name=C21854; organism=Citrus sinensis; type=EST; length=282bpback to top |