C21855

Overview
NameC21855
Unique NameC21855
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length259
Libraries
Library NameType
Valencia orange young seeds cDNAcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of C21855 vs. ExPASy Swiss-Prot
Match: 1433_PEA (14-3-3-like protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.756e-15
Identity = 45/64 (70.31%), Postives = 54/64 (84.38%), Query Frame = 3
Query:   39 AMGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSXRA 230
            A  TP RE+ VY+AKLAEQAERYEEMV+FM+  V+++  + ELTVEERNLLSVAYKNVIG+ RA
Sbjct:    3 AAHTP-REENVYMAKLAEQAERYEEMVEFMEK-VSANADSEELTVEERNLLSVAYKNVIGARRA 64          
BLAST of C21855 vs. ExPASy Swiss-Prot
Match: 1433A_HORVU (14-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.756e-15
Identity = 43/59 (72.88%), Postives = 49/59 (83.05%), Query Frame = 3
Query:   54 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSXRA 230
            TRE+ VY+AKLAEQAERYEEMV+FM+  V  +    ELTVEERNLLSVAYKNVIG+ RA
Sbjct:    7 TREENVYMAKLAEQAERYEEMVEFMEK-VAKTADVGELTVEERNLLSVAYKNVIGARRA 64          
BLAST of C21855 vs. ExPASy Swiss-Prot
Match: 14332_SOLLC (14-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.756e-15
Identity = 43/58 (74.14%), Postives = 51/58 (87.93%), Query Frame = 3
Query:   57 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSXRA 230
            RE+ VY+AKLAEQAERYEEMV+FM+  V++S  + ELTVEERNLLSVAYKNVIG+ RA
Sbjct:    3 REENVYMAKLAEQAERYEEMVQFMEK-VSTSLGSEELTVEERNLLSVAYKNVIGARRA 59          
BLAST of C21855 vs. ExPASy Swiss-Prot
Match: 1433_OENEH (14-3-3-like protein OS=Oenothera elata subsp. hookeri PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 2.294e-15
Identity = 43/58 (74.14%), Postives = 50/58 (86.21%), Query Frame = 3
Query:   57 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSXRA 230
            RE+ VYLAKLAEQAERYEEMV+FM+  V ++  + ELTVEERNLLSVAYKNVIG+ RA
Sbjct:    8 REENVYLAKLAEQAERYEEMVEFMEK-VCAAADSEELTVEERNLLSVAYKNVIGARRA 64          
BLAST of C21855 vs. ExPASy Swiss-Prot
Match: 14337_ARATH (14-3-3-like protein GF14 nu OS=Arabidopsis thaliana GN=GRF7 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.294e-15
Identity = 43/59 (72.88%), Postives = 49/59 (83.05%), Query Frame = 3
Query:   54 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSXRA 230
            +RE+ VYLAKLAEQAERYEEMV+FM+  V  +    ELTVEERNLLSVAYKNVIG+ RA
Sbjct:    4 SREENVYLAKLAEQAERYEEMVEFMEK-VAKTVDTDELTVEERNLLSVAYKNVIGARRA 61          
BLAST of C21855 vs. ExPASy Swiss-Prot
Match: 14335_ARATH (14-3-3-like protein GF14 upsilon OS=Arabidopsis thaliana GN=GRF5 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 2.294e-15
Identity = 43/59 (72.88%), Postives = 49/59 (83.05%), Query Frame = 3
Query:   54 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSXRA 230
            +RE+ VYLAKLAEQAERYEEMV+FM+  V  +    ELTVEERNLLSVAYKNVIG+ RA
Sbjct:    6 SREENVYLAKLAEQAERYEEMVEFMEK-VAKTVETEELTVEERNLLSVAYKNVIGARRA 63          
BLAST of C21855 vs. ExPASy Swiss-Prot
Match: 14331_ARATH (14-3-3-like protein GF14 chi OS=Arabidopsis thaliana GN=GRF1 PE=1 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 2.294e-15
Identity = 44/67 (65.67%), Postives = 52/67 (77.61%), Query Frame = 3
Query:   42 MGTP----TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSXRA 230
            M TP     R+++VY+AKLAEQAERYEEMV+FM+  V  +    ELTVEERNLLSVAYKNVIG+ RA
Sbjct:    1 MATPGASSARDEFVYMAKLAEQAERYEEMVEFMEK-VAKAVDKDELTVEERNLLSVAYKNVIGARRA 66          
BLAST of C21855 vs. ExPASy Swiss-Prot
Match: 1433B_HORVU (14-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.996e-15
Identity = 42/59 (71.19%), Postives = 50/59 (84.75%), Query Frame = 3
Query:   54 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSXRA 230
            +RE+ VY+AKLAEQAERYEEMV+FM+  V  +  + ELTVEERNLLSVAYKNVIG+ RA
Sbjct:    8 SREENVYMAKLAEQAERYEEMVEFMEK-VAKTVDSEELTVEERNLLSVAYKNVIGARRA 65          
BLAST of C21855 vs. ExPASy Swiss-Prot
Match: 14335_ORYSJ (14-3-3-like protein GF14-E OS=Oryza sativa subsp. japonica GN=GF14E PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.996e-15
Identity = 42/59 (71.19%), Postives = 50/59 (84.75%), Query Frame = 3
Query:   54 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSXRA 230
            +RE+ VY+AKLAEQAERYEEMV+FM+  V  +  + ELTVEERNLLSVAYKNVIG+ RA
Sbjct:    8 SREENVYMAKLAEQAERYEEMVEFMEK-VAKTVDSEELTVEERNLLSVAYKNVIGARRA 65          
BLAST of C21855 vs. ExPASy Swiss-Prot
Match: 14334_ORYSJ (14-3-3-like protein GF14-D OS=Oryza sativa subsp. japonica GN=GF14D PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.996e-15
Identity = 43/63 (68.25%), Postives = 52/63 (82.54%), Query Frame = 3
Query:   51 PTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPAT---ELTVEERNLLSVAYKNVIGSXRA 230
            PTRE+ VY AKLAEQAERYEEMV++M+ +  ++  A+   ELTVEERNLLSVAYKNVIG+ RA
Sbjct:    6 PTREESVYKAKLAEQAERYEEMVEYMERVARAAGGASGGEELTVEERNLLSVAYKNVIGARRA 68          
The following BLAST results are available for this feature:
BLAST of C21855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
1433_PEA1.756e-1570.3114-3-3-like protein OS=Pisum sativum PE=2 SV=1[more]
1433A_HORVU1.756e-1572.8814-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1[more]
14332_SOLLC1.756e-1574.1414-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 P... [more]
1433_OENEH2.294e-1574.1414-3-3-like protein OS=Oenothera elata subsp. hook... [more]
14337_ARATH2.294e-1572.8814-3-3-like protein GF14 nu OS=Arabidopsis thalian... [more]
14335_ARATH2.294e-1572.8814-3-3-like protein GF14 upsilon OS=Arabidopsis th... [more]
14331_ARATH2.294e-1565.6714-3-3-like protein GF14 chi OS=Arabidopsis thalia... [more]
1433B_HORVU2.996e-1571.1914-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1[more]
14335_ORYSJ2.996e-1571.1914-3-3-like protein GF14-E OS=Oryza sativa subsp. ... [more]
14334_ORYSJ2.996e-1568.2514-3-3-like protein GF14-D OS=Oryza sativa subsp. ... [more]

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Properties
Property NameValue
Genbank descriptionC21855 Valencia orange young seeds cDNA Citrus sinensis cDNA clone corVSSG-33R 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>C21855 ID=C21855; Name=C21855; organism=Citrus sinensis; type=EST; length=259bp
GGCACGANTCCAGTTAACTTTACAGTTTCTGCAATTNTGCTATGGGAACC
CCGACGAGAGAGCAATACGTTTACCTGGCGAAACTCGCCGAGCAAGCNGA
GCGCTATGAAGAGATGGTTAAGTTCATGGACAGCCTCGTCACTTCCTCCA
CTCCGGCGACTGAACTCACCGTCGAGGAGCGCAACCTCCTCTCCGTTGCT
TACAAGAACGTCATCGGCTCTNTTCGCGCCGGTGGNGTATTATCTCCTCT
ATCGAGCAG
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