C21866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of C21866 vs. ExPASy Swiss-Prot
Match: TCTP_SOLLC (Translationally-controlled tumor protein homolog OS=Solanum lycopersicum GN=TCTP PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.933e-27 Identity = 57/79 (72.15%), Postives = 62/79 (78.48%), Query Frame = 2 Query: 11 YMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFXGESMHDDGCXVFXYYKEGATDPTFXYIADALKEVKC 247 +MKR+IK LTPKL E QE FKKNIE ATKFLL K+ DLQFF GESMHDDG VF YYKEG+ DP F YIA LKE+KC Sbjct: 90 FMKRYIKNLTPKLEGETQEAFKKNIEAATKFLLQKIKDLQFFVGESMHDDGALVFAYYKEGSADPPFLYIAPGLKEIKC 168
BLAST of C21866 vs. ExPASy Swiss-Prot
Match: TCTP_ORYSJ (Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica GN=TCTP PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.307e-27 Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = 2 Query: 11 YMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFXGESMHDDGCXVFXYYKEGATDPTFXYIADALKEVKC 247 +MKR+IK L+ KL E+QE FKKNIEGATK+LL KL DLQFF GESMHDDG VF YYK+GATDPTF Y + LKEVKC Sbjct: 90 FMKRYIKNLSAKLDAEKQEEFKKNIEGATKYLLGKLKDLQFFVGESMHDDGGLVFAYYKDGATDPTFLYFSHGLKEVKC 168
BLAST of C21866 vs. ExPASy Swiss-Prot
Match: TCTP_FRAAN (Translationally-controlled tumor protein homolog OS=Fragaria ananassa GN=TCTP PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.307e-27 Identity = 60/79 (75.95%), Postives = 64/79 (81.01%), Query Frame = 2 Query: 11 YMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFXGESMHDDGCXVFXYYKEGATDPTFXYIADALKEVKC 247 ++KR+IKLLTPKL E+QE FKKNIEGATKFLLSKLSDLQFF GESM DD VF YKEGATDP F Y A LKEVKC Sbjct: 92 WVKRYIKLLTPKLEGEQQETFKKNIEGATKFLLSKLSDLQFFVGESMGDDTSLVFASYKEGATDPIFIYFAHGLKEVKC 170
BLAST of C21866 vs. ExPASy Swiss-Prot
Match: TCTP_SOLTU (Translationally-controlled tumor protein homolog OS=Solanum tuberosum GN=TCTP PE=2 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 1.253e-26 Identity = 55/79 (69.62%), Postives = 61/79 (77.22%), Query Frame = 2 Query: 11 YMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFXGESMHDDGCXVFXYYKEGATDPTFXYIADALKEVKC 247 Y+KR+IK LTPKL E QE FKKNIE ATKFLLSKL D QFF GE MHDD VF YYK+G+ DPTF Y+A LKE+KC Sbjct: 90 YIKRYIKNLTPKLEGEAQEAFKKNIESATKFLLSKLKDFQFFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168
BLAST of C21866 vs. ExPASy Swiss-Prot
Match: TCTP_HORVU (Translationally-controlled tumor protein homolog OS=Hordeum vulgare GN=TCTP PE=2 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 2.138e-26 Identity = 56/80 (70.00%), Postives = 62/80 (77.50%), Query Frame = 2 Query: 8 AYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFXGESMHDDGCXVFXYYKEGATDPTFXYIADALKEVKC 247 AY+KR+IK LT KL E + FKKN+E ATK+LLSKL DLQFF GESMHDDG VF YY+EGA DPTF Y A LKEVKC Sbjct: 89 AYIKRYIKNLTAKLEGEELDAFKKNVESATKYLLSKLKDLQFFVGESMHDDGSVVFAYYREGAADPTFLYFAHGLKEVKC 168
BLAST of C21866 vs. ExPASy Swiss-Prot
Match: TCTP_WHEAT (Translationally-controlled tumor protein homolog OS=Triticum aestivum GN=TCTP PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.810e-25 Identity = 54/80 (67.50%), Postives = 63/80 (78.75%), Query Frame = 2 Query: 8 AYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFXGESMHDDGCXVFXYYKEGATDPTFXYIADALKEVKC 247 ++MKR+IK L+ KL + ++FKKN+E ATK+LLSKL DLQFF GESMHDDG VF YYKEGA DPTF Y A LKEVKC Sbjct: 89 SHMKRYIKNLSAKLEGDDLDVFKKNVESATKYLLSKLKDLQFFVGESMHDDGGVVFAYYKEGAADPTFLYFAHGLKEVKC 168
BLAST of C21866 vs. ExPASy Swiss-Prot
Match: TCTP_CUCME (Translationally-controlled tumor protein homolog OS=Cucumis melo GN=TCTP PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.821e-24 Identity = 53/78 (67.95%), Postives = 59/78 (75.64%), Query Frame = 2 Query: 14 MKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFXGESMHDDGCXVFXYYKEGATDPTFXYIADALKEVKC 247 +K++IK LTP L E+QE FK IEGA K+LL K+ DLQFF GESM DD VF YYKEGATDPTF YIA LKEVKC Sbjct: 91 IKKYIKKLTPLLQGEQQEAFKNKIEGAVKYLLPKVKDLQFFVGESMADDSAMVFAYYKEGATDPTFLYIAPGLKEVKC 168
BLAST of C21866 vs. ExPASy Swiss-Prot
Match: TCTP_MAIZE (Translationally-controlled tumor protein homolog OS=Zea mays GN=TCTP PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.116e-22 Identity = 48/80 (60.00%), Postives = 59/80 (73.75%), Query Frame = 2 Query: 8 AYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFXGESMHDDGCXVFXYYKEGATDPTFXYIADALKEVKC 247 +Y+K++IK LT L E+ + FKK +EGATKFLLSKL DLQFF GESM DD F YYK+GAT+ TF Y + LKE+KC Sbjct: 88 SYIKKYIKNLTAVLEPEKADEFKKGVEGATKFLLSKLKDLQFFVGESMKDDASVAFAYYKDGATNSTFLYFSHGLKEIKC 167 The following BLAST results are available for this feature:
BLAST of C21866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >C21866 ID=C21866; Name=C21866; organism=Citrus sinensis; type=EST; length=254bpback to top |