C21903

Overview
NameC21903
Unique NameC21903
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length216
Libraries
Library NameType
Valencia orange young seeds cDNAcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of C21903 vs. ExPASy Swiss-Prot
Match: 1433_HELAN (14-3-3-like protein OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.222e-13
Identity = 39/59 (66.10%), Postives = 45/59 (76.27%), Query Frame = 3
Query:   39 AMGTPTREQYVYLAKLAEQAERYEEMVXFMDSLVTSXTPATELTVEERNLLSVAXKNVI 215
            A  +  RE+ VYLAKLAEQAERYEEMV FM+ +V +     ELT+EERNLLSVA KNVI
Sbjct:    2 AAASSPREENVYLAKLAEQAERYEEMVEFMEKVVAAADGGEELTIEERNLLSVAYKNVI 60          
BLAST of C21903 vs. ExPASy Swiss-Prot
Match: 1433B_TOBAC (14-3-3-like protein B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.222e-13
Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = 3
Query:   57 REQYVYLAKLAEQAERYEEMVXFMDSLVTSXTPATELTVEERNLLSVAXKNVI 215
            RE+ VY+AKLAEQAERYEEMV FM+ + TS   + ELTVEERNLLSVA KNVI
Sbjct:    3 REENVYMAKLAEQAERYEEMVSFMEKVSTSLGTSEELTVEERNLLSVAYKNVI 55          
BLAST of C21903 vs. ExPASy Swiss-Prot
Match: 1433A_VICFA (14-3-3-like protein A OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.723e-13
Identity = 39/53 (73.58%), Postives = 45/53 (84.91%), Query Frame = 3
Query:   57 REQYVYLAKLAEQAERYEEMVXFMDSLVTSXTPATELTVEERNLLSVAXKNVI 215
            RE++VY+AKLAEQAERYEEMV FM+  VT+   + ELTVEERNLLSVA KNVI
Sbjct:    8 REEFVYMAKLAEQAERYEEMVEFMEK-VTAAVESEELTVEERNLLSVAYKNVI 59          
BLAST of C21903 vs. ExPASy Swiss-Prot
Match: 1433E_TOBAC (14-3-3-like protein E OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.921e-13
Identity = 40/58 (68.97%), Postives = 43/58 (74.14%), Query Frame = 3
Query:   42 MGTPTREQYVYLAKLAEQAERYEEMVXFMDSLVTSXTPATELTVEERNLLSVAXKNVI 215
            M   TRE+ VY+AKLAEQAERYEEMV FM+  V       ELTVEERNLLSVA KNVI
Sbjct:    1 MAESTREENVYMAKLAEQAERYEEMVEFMEK-VAKTVDVEELTVEERNLLSVAYKNVI 57          
BLAST of C21903 vs. ExPASy Swiss-Prot
Match: 1433_LILLO (14-3-3-like protein OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.035e-12
Identity = 39/55 (70.91%), Postives = 43/55 (78.18%), Query Frame = 3
Query:   51 PTREQYVYLAKLAEQAERYEEMVXFMDSLVTSXTPATELTVEERNLLSVAXKNVI 215
            P+RE+ VY+AKLAEQAERYEEMV FM+  V       ELTVEERNLLSVA KNVI
Sbjct:    6 PSREENVYMAKLAEQAERYEEMVEFMEK-VARTVDTEELTVEERNLLSVAYKNVI 59          
BLAST of C21903 vs. ExPASy Swiss-Prot
Match: 14332_ARATH (14-3-3-like protein GF14 omega OS=Arabidopsis thaliana GN=GRF2 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.035e-12
Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = 3
Query:   57 REQYVYLAKLAEQAERYEEMVXFMDSLVTSXTPATELTVEERNLLSVAXKNVI 215
            RE++VY+AKLAEQAERYEEMV FM+  V++     ELTVEERNLLSVA KNVI
Sbjct:    5 REEFVYMAKLAEQAERYEEMVEFMEK-VSAAVDGDELTVEERNLLSVAYKNVI 56          
BLAST of C21903 vs. ExPASy Swiss-Prot
Match: 14334_ARATH (14-3-3-like protein GF14 phi OS=Arabidopsis thaliana GN=GRF4 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.351e-12
Identity = 39/53 (73.58%), Postives = 42/53 (79.25%), Query Frame = 3
Query:   57 REQYVYLAKLAEQAERYEEMVXFMDSLVTSXTPATELTVEERNLLSVAXKNVI 215
            RE++VYLAKLAEQAERYEEMV FM+  V       ELTVEERNLLSVA KNVI
Sbjct:   11 REEFVYLAKLAEQAERYEEMVEFMEK-VAEAVDKDELTVEERNLLSVAYKNVI 62          
BLAST of C21903 vs. ExPASy Swiss-Prot
Match: 14332_ORYSJ (14-3-3-like protein GF14-B OS=Oryza sativa subsp. japonica GN=GF14B PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.351e-12
Identity = 40/60 (66.67%), Postives = 45/60 (75.00%), Query Frame = 3
Query:   36 SAMGTPTREQYVYLAKLAEQAERYEEMVXFMDSLVTSXTPATELTVEERNLLSVAXKNVI 215
            SA    +RE+ VY+AKLAEQAERYEEMV FM+  V     + ELTVEERNLLSVA KNVI
Sbjct:    2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEK-VAKTVDSEELTVEERNLLSVAYKNVI 60          
BLAST of C21903 vs. ExPASy Swiss-Prot
Match: 1433_PEA (14-3-3-like protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.765e-12
Identity = 41/60 (68.33%), Postives = 48/60 (80.00%), Query Frame = 3
Query:   36 SAMGTPTREQYVYLAKLAEQAERYEEMVXFMDSLVTSXTPATELTVEERNLLSVAXKNVI 215
            +A  TP RE+ VY+AKLAEQAERYEEMV FM+  V++   + ELTVEERNLLSVA KNVI
Sbjct:    2 AAAHTP-REENVYMAKLAEQAERYEEMVEFMEK-VSANADSEELTVEERNLLSVAYKNVI 59          
BLAST of C21903 vs. ExPASy Swiss-Prot
Match: 14336_ORYSJ (14-3-3-like protein GF14-F OS=Oryza sativa subsp. japonica GN=GF14F PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.765e-12
Identity = 39/54 (72.22%), Postives = 43/54 (79.63%), Query Frame = 3
Query:   54 TREQYVYLAKLAEQAERYEEMVXFMDSLVTSXTPATELTVEERNLLSVAXKNVI 215
            +RE+ VY+AKLAEQAERYEEMV FM+  V   T   ELTVEERNLLSVA KNVI
Sbjct:    7 SREENVYMAKLAEQAERYEEMVEFMEK-VAKTTDVGELTVEERNLLSVAYKNVI 59          
The following BLAST results are available for this feature:
BLAST of C21903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
1433_HELAN1.222e-1366.1014-3-3-like protein OS=Helianthus annuus PE=2 SV=1[more]
1433B_TOBAC1.222e-1373.5814-3-3-like protein B OS=Nicotiana tabacum PE=2 SV... [more]
1433A_VICFA2.723e-1373.5814-3-3-like protein A OS=Vicia faba PE=2 SV=1[more]
1433E_TOBAC7.921e-1368.9714-3-3-like protein E OS=Nicotiana tabacum PE=2 SV... [more]
1433_LILLO1.035e-1270.9114-3-3-like protein OS=Lilium longiflorum PE=2 SV=... [more]
14332_ARATH1.035e-1271.7014-3-3-like protein GF14 omega OS=Arabidopsis thal... [more]
14334_ARATH1.351e-1273.5814-3-3-like protein GF14 phi OS=Arabidopsis thalia... [more]
14332_ORYSJ1.351e-1266.6714-3-3-like protein GF14-B OS=Oryza sativa subsp. ... [more]
1433_PEA1.765e-1268.3314-3-3-like protein OS=Pisum sativum PE=2 SV=1[more]
14336_ORYSJ1.765e-1272.2214-3-3-like protein GF14-F OS=Oryza sativa subsp. ... [more]

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Properties
Property NameValue
Genbank descriptionC21903 Valencia orange young seeds cDNA Citrus sinensis cDNA clone corVSSG-32R 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>C21903 ID=C21903; Name=C21903; organism=Citrus sinensis; type=EST; length=216bp
GGCACGAGTCCAGTTAACTTTACAGTTTCTGCAATTCTGCTATGGGAACC
CCGACGAGAGAGCAATACGTTTACCTGGCGAAACTCGCNGAGCAAGCNGA
GCGCTATGAAGAGATGGTTAANTTCATGGACAGCCTCGTCACTTCCNCCA
CTCCGGCGACTGAACTCACCGTCGAGGAGCGCAACCTTCTCTCCGTTGCT
NACAAGAACGTCATCG
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