CB250245

Overview
NameCB250245
Unique NameCB250245
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP73_DROME (Major heat shock 70 kDa protein Bb OS=Drosophila melanogaster GN=Hsp70Bb PE=2 SV=2)

HSP 1 Score: 297.745 bits (761), Expect = 3.906e-80
Identity = 152/235 (64.68%), Postives = 172/235 (73.19%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+V H  +EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFYT ++RARFEEL  DLFR  ++PVEK L DAKMDK  +HD+VLVGGSTRIPKVQ LLQ+FF+GK L  SINPDE           ILSG+ + K+QD             ETAGGVMT LI RN  IP K  + FSTYSDNQPGV IQVYEGER  T+DNN LG FD SGIPPAPRG
Sbjct:  234 RLVTHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARFEELCADLFRNTLQPVEKALNDAKMDKGQIHDIVLVGGSTRIPKVQSLLQEFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLGIETAGGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRG 468          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP72_DROME (Major heat shock 70 kDa protein Ba OS=Drosophila melanogaster GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 297.745 bits (761), Expect = 3.906e-80
Identity = 152/235 (64.68%), Postives = 172/235 (73.19%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+V H  +EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFYT ++RARFEEL  DLFR  ++PVEK L DAKMDK  +HD+VLVGGSTRIPKVQ LLQ+FF+GK L  SINPDE           ILSG+ + K+QD             ETAGGVMT LI RN  IP K  + FSTYSDNQPGV IQVYEGER  T+DNN LG FD SGIPPAPRG
Sbjct:  234 RLVTHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARFEELCADLFRNTLQPVEKALNDAKMDKGQIHDIVLVGGSTRIPKVQSLLQEFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLGIETAGGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRG 468          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP72_DROSI (Major heat shock 70 kDa protein Ba OS=Drosophila simulans GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 297.36 bits (760), Expect = 5.102e-80
Identity = 152/235 (64.68%), Postives = 172/235 (73.19%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+V H  +EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFYT ++RARFEEL  DLFR  ++PVEK L DAKMDK  +HD+VLVGGSTRIPKVQ LLQ+FF+GK L  SINPDE           ILSG+ + K+QD             ETAGGVMT LI RN  IP K  + FSTYSDNQPGV IQVYEGER  T+DNN LG FD SGIPPAPRG
Sbjct:  234 RLVTHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARFEELCADLFRNTLQPVEKALTDAKMDKGQIHDIVLVGGSTRIPKVQSLLQEFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLGIETAGGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRG 468          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP71_DROSI (Major heat shock 70 kDa protein Ab OS=Drosophila simulans GN=Hsp70Ab PE=2 SV=2)

HSP 1 Score: 297.36 bits (760), Expect = 5.102e-80
Identity = 152/235 (64.68%), Postives = 171/235 (72.77%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+V H  +EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFYT ++RARFEEL  DLFR  ++PVEK L DAKMDK  +HD+VLVGGSTRIPKVQ LLQ+FF+GK L  SINPDE           ILSG+   K+QD             ETAGGVMT LI RN  IP K  + FSTYSDNQPGV IQVYEGER  T+DNN LG FD SGIPPAPRG
Sbjct:  234 RLVTHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARFEELCADLFRNTLQPVEKALNDAKMDKGQIHDIVLVGGSTRIPKVQSLLQEFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQTGKIQDVLLVDVAPLSLGIETAGGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRG 468          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP71_DROME (Major heat shock 70 kDa protein Ab OS=Drosophila melanogaster GN=Hsp70Ab PE=1 SV=3)

HSP 1 Score: 297.36 bits (760), Expect = 5.102e-80
Identity = 152/235 (64.68%), Postives = 171/235 (72.77%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+V H   EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFYT ++RARFEEL  DLFR  ++PVEK L DAKMDK  +HD+VLVGGSTRIPKVQ LLQDFF+GK L  SINPDE           ILSG+ + K+QD             ETAGGVMT LI RN  IP K  + FSTY+DNQPGV IQVYEGER  T+DNN LG FD SGIPPAPRG
Sbjct:  234 RLVTHLADEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARFEELCADLFRNTLQPVEKALNDAKMDKGQIHDIVLVGGSTRIPKVQSLLQDFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLGIETAGGVMTKLIERNCRIPCKQTKTFSTYADNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRG 468          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_DROME (Major heat shock 70 kDa protein Aa OS=Drosophila melanogaster GN=Hsp70Aa PE=2 SV=2)

HSP 1 Score: 297.36 bits (760), Expect = 5.102e-80
Identity = 152/235 (64.68%), Postives = 171/235 (72.77%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+V H   EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFYT ++RARFEEL  DLFR  ++PVEK L DAKMDK  +HD+VLVGGSTRIPKVQ LLQDFF+GK L  SINPDE           ILSG+ + K+QD             ETAGGVMT LI RN  IP K  + FSTY+DNQPGV IQVYEGER  T+DNN LG FD SGIPPAPRG
Sbjct:  234 RLVTHLADEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARFEELCADLFRNTLQPVEKALNDAKMDKGQIHDIVLVGGSTRIPKVQSLLQDFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLGIETAGGVMTKLIERNCRIPCKQTKTFSTYADNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRG 468          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_AJECA (Heat shock 70 kDa protein OS=Ajellomyces capsulata GN=HSP70 PE=3 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 4.319e-79
Identity = 157/234 (67.09%), Postives = 178/234 (76.07%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKK-DISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPA 698
            R+VNHFV EFKRK KK   +   RALRR  TACERAKRTLSS AQT+IEIDSLYEGIDFYT+ITRARFEEL  DLFR  MEPVE+ LRDAK+DKSSVH++VLVGGSTRIP++Q+L+ DFFNGKE  KSINPDE           ILSG+ + K   +             ETAGGVMT LI RNTTIPTK  + FST+SDNQPGVLIQV+EGER RT+DNNLLGKF+ +GIP A
Sbjct:  234 RLVNHFVSEFKRKFKKISPAERARALRRSPTACERAKRTLSSAAQTSIEIDSLYEGIDFYTSITRARFEELCQDLFRSTMEPVERVLRDAKIDKSSVHEIVLVGGSTRIPRIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILSGDTSSKSTNEILLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSETFSTFSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPRA 467          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP68_DROME (Heat shock protein 68 OS=Drosophila melanogaster GN=Hsp68 PE=1 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 7.367e-79
Identity = 146/235 (62.13%), Postives = 176/235 (74.89%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+VNHF +EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + ++EID+LYEG DFY+ ++RARFEEL  DLFR  +EPVEK L+DAKMDKS +HD+VLVGGSTRIPKVQ LLQ+FF GK L  SINPDE           ILSG+ + +++D             ETAGGVMT LI RN+ IP K  + F+TY+DNQP V IQV+EGER  T+DNN+LG FD +G+PPAPRG
Sbjct:  234 RLVNHFAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEASLEIDALYEGHDFYSKVSRARFEELCGDLFRNTLEPVEKALKDAKMDKSQIHDIVLVGGSTRIPKVQNLLQNFFGGKTLNLSINPDEAVAYGAAIQAAILSGDKSSEIKDVLLVDVAPLSLGIETAGGVMTKLIERNSRIPCKQSKTFTTYADNQPAVTIQVFEGERALTKDNNVLGTFDLTGVPPAPRG 468          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_LEIMA (Heat shock 70 kDa protein (Fragment) OS=Leishmania major GN=HSP70 PE=3 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 4.775e-78
Identity = 153/236 (64.83%), Postives = 176/236 (74.58%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNK-KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+V  F +EFKRKNK K+++ + RALRRLRTACERAKRTLSS  Q TIEID+L+E IDF  TITRARFEEL  DLFR  ++PVE+ L+DAKMDK SVHDVVLVGGSTRIPKVQ L+ DFF GKEL KSINPDE           IL+G  +++ +              ETAGGVMT LI RNTTIPTK  Q+FSTY+DNQPGV IQV+EGER  T+D +LLG FD SGIPPAPRG
Sbjct:  238 RLVTFFTEEFKRKNKGKNLASSHRALRRLRTACERAKRTLSSATQATIEIDALFENIDFQATITRARFEELCGDLFRSTIQPVERVLQDAKMDKRSVHDVVLVGGSTRIPKVQSLVSDFFGGKELNKSINPDEAVAYGAAVQAFILTGGKSKQTEGLLLLDVTPLTLGIETAGGVMTALIKRNTTIPTKKSQIFSTYADNQPGVHIQVFEGERAMTKDCHLLGTFDLSGIPPAPRG 473          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_CERCA (Heat shock protein 70 OS=Ceratitis capitata PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.237e-78
Identity = 150/235 (63.83%), Postives = 171/235 (72.77%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+V+H  +EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EGID YT ++RARFEEL  DLFR+ +EPVEK L DAKMDK+ +H  VLVGGSTRIPKVQ+LLQ FF GK L  SINPDE           ILSG+ + ++QD             ETAGGVM  +I RN  IP K  Q FSTYSDNQPGV IQVYEGER  T+DNN LG FD SGIPPAPRG
Sbjct:  233 RLVSHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGIDLYTKVSRARFEELCADLFRQTLEPVEKALNDAKMDKNQIHVYVLVGGSTRIPKVQRLLQSFFCGKSLNLSINPDEAVAYGAAVQAAILSGDKSTEIQDVLLVDVAPLSLGIETAGGVMAKIIERNCRIPCKQTQTFSTYSDNQPGVNIQVYEGERVMTKDNNRLGTFDLSGIPPAPRG 467          
The following BLAST results are available for this feature:
BLAST of CB250245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP73_DROME3.906e-8064.68Major heat shock 70 kDa protein Bb OS=Drosophila m... [more]
HSP72_DROME3.906e-8064.68Major heat shock 70 kDa protein Ba OS=Drosophila m... [more]
HSP72_DROSI5.102e-8064.68Major heat shock 70 kDa protein Ba OS=Drosophila s... [more]
HSP71_DROSI5.102e-8064.68Major heat shock 70 kDa protein Ab OS=Drosophila s... [more]
HSP71_DROME5.102e-8064.68Major heat shock 70 kDa protein Ab OS=Drosophila m... [more]
HSP70_DROME5.102e-8064.68Major heat shock 70 kDa protein Aa OS=Drosophila m... [more]
HSP70_AJECA4.319e-7967.09Heat shock 70 kDa protein OS=Ajellomyces capsulata... [more]
HSP68_DROME7.367e-7962.13Heat shock protein 68 OS=Drosophila melanogaster G... [more]
HSP70_LEIMA4.775e-7864.83Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
HSP70_CERCA6.237e-7863.83Heat shock protein 70 OS=Ceratitis capitata PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionEST0007 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ007 similar to 70 kDa heat shock protein (acc# P27322), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250245 ID=CB250245; Name=CB250245; organism=Citrus sinensis; type=EST; length=709bp
ACAGAATGGTGAACCACTTTGTTCAAGAGTTCAAGAGGAAAAACAAGAAG
GATATTAGTGGAAACCCCAGAGCGTTGAGGAGGTTGAGAACCGCCTGTGA
AAGGGCTAAGAGGACCCTGTCATCAACTGCACAGACTACAATTGAGATTG
ATTCTTTATATGAGGGTATTGATTTCTACACAACCATTACAAGGGCTAGA
TTCGAAGAGTTGAACATGGATTTGTTCAGGAAGTGTATGGAGCCAGTGGA
GAAATGCCTGAGAGATGCTAAGATGGACAAGAGCAGTGTCCATGATGTGG
TTCTTGTTGGTGGGTCTACTAGGATCCCAAAAGTCCAGCAACTGTTGCAG
GACTTCTTCAATGGAAAAGAGCTATGCAAGAGCATCAACCCTGATGAAGC
GGTTGCCTACGGTGCTGCTGTGCAGGCTGCAATCTTGAGTGGTGAGGGTA
ATGAGAAGGTTCAGGACCTCTTATTGCTTGACGTCACCCCTCTATCGCTG
GGTTTGGAGACTGCTGGTGGAGTCATGACTGTGTTGATTCCAAGGAACAC
CACTATTCCAACCAAGAATGAGCAGGTGTTCTCCACATACTCTGACAACC
AGCCCGGGGTGTTGATCCAGGTCTACGAGGGTGAGCGCACAAGAACCCGT
GACAACAACTTGCTTGGAAAGTTTGATCCCTCTGGCATTCCTCCTGCTCC
AAGAGGGGT
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