CB250245

Overview
NameCB250245
Unique NameCB250245
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 4.043e-77
Identity = 151/236 (63.98%), Postives = 175/236 (74.15%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNK-KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+V  F +EFKRKNK K+++ + RALR LRTACERAKRTLSS  Q TIEID+L+E +DF  TITRARFEEL  DLFR  ++PVE+ L+DAKMDK SVHDVVLVGGSTRIPKVQ L+ DFF GKEL KSINPDE           IL+G  +++ +              ETAGGVMT LI RNTTIPTK  Q+FSTY+DNQPGV IQV+EGER  T+D +LLG FD SGIPPAPRG
Sbjct:  237 RLVTFFTEEFKRKNKGKNLASSHRALRGLRTACERAKRTLSSATQATIEIDALFENVDFQATITRARFEELCGDLFRSTIQPVERVLQDAKMDKRSVHDVVLVGGSTRIPKVQSLVSDFFGGKELNKSINPDEAVAYGAAVQAFILTGGKSKQTEGLLLLDVTPLTLGIETAGGVMTALIKRNTTIPTKKSQIFSTYADNQPGVHIQVFEGERAMTKDCHLLGTFDLSGIPPAPRG 472          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_TRYCR (Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 6.896e-77
Identity = 151/236 (63.98%), Postives = 175/236 (74.15%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNK-KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+V HF  EFKRKNK KD+S N RALRRLRTACERAKRTLSS AQ TIEID+L++ +DF  TITRARFEEL  +LFR  ++PVE+ L+DAKMDK +VHDVVLVGGSTRIPKV QL+ DFF GKEL KSI PDE           IL+G  +++ +              ETAGGVMT LI RNTTIPTK  Q+FSTY+DNQPGV IQV+EGER  T+D +LLG F+ SGIPP PRG
Sbjct:  238 RLVAHFTDEFKRKNKGKDLSTNLRALRRLRTACERAKRTLSSAAQATIEIDALFDNVDFQATITRARFEELCGELFRGTLQPVERVLQDAKMDKRAVHDVVLVGGSTRIPKVMQLVSDFFRGKELKKSIQPDEAVAYGAAVQAFILTGGKSKQTEGLLLLDVTPLTLGIETAGGVMTSLIKRNTTIPTKKSQIFSTYADNQPGVHIQVFEGERAMTKDCHLLGTFELSGIPPPPRG 473          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_LEIAM (Heat shock 70 kDa protein OS=Leishmania amazonensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.176e-76
Identity = 149/236 (63.14%), Postives = 175/236 (74.15%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNK-KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+V  F +EFKRKNK K+++ + R+LRRLRTACERAKRTLSS  Q TIEID+L++ +DF  TI RARFEEL  DLFR  ++PVE+ L+DAKMDK SVHDVVLVGGSTRIPKVQ L+ DFF GKEL KSINPDE           IL+G  +++ +              ETAGGVMT LI RNTTIPTK  Q+FSTY+DNQPGV IQV+EGER  T+D +LLG FD SGIPPAPRG
Sbjct:  238 RLVTFFTEEFKRKNKGKNLASSHRSLRRLRTACERAKRTLSSATQATIEIDALFDNVDFQATINRARFEELCGDLFRSTIQPVERVLQDAKMDKRSVHDVVLVGGSTRIPKVQSLVSDFFGGKELNKSINPDEAVAYGAAVQAFILTGGKSKQTEGLLLLDVTPLTLGIETAGGVMTALIKRNTTIPTKKSQIFSTYADNQPGVHIQVFEGERAMTKDCHLLGTFDLSGIPPAPRG 473          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_THEPA (Heat shock 70 kDa protein OS=Theileria parva GN=TP02_0148 PE=2 SV=2)

HSP 1 Score: 277.33 bits (708), Expect = 5.464e-74
Identity = 144/235 (61.28%), Postives = 171/235 (72.77%), Query Frame = 3
Query:    6 MVNHFVQEFKRKNK-KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            +V H V++F R N  K+IS N RALRRLRT CERAKR LSS+ Q TIE+DSLYEGID+ TTI+RARFEEL  + FR  + PVEK L  + +DK S+H+VVLVGGSTRIPK+Q L+++FFNGKE C+SINPDE           ILSG  +EK+Q+             ETAGGVMTVLI RNTTIPTK  Q+F+T  D Q GVLIQV+EGER  T+DNNLLGKF  +GI PAPRG
Sbjct:  237 LVEHCVRDFMRLNNGKNISSNKRALRRLRTHCERAKRVLSSSTQATIELDSLYEGIDYNTTISRARFEELCNEKFRSTLVPVEKALESSGLDKRSIHEVVLVGGSTRIPKIQTLIKNFFNGKEPCRSINPDEAVAYGAAVQAAILSGNQSEKIQELLLLDVAPLSLGLETAGGVMTVLIKRNTTIPTKKNQIFTTNEDRQEGVLIQVFEGERAMTKDNNLLGKFHLTGIAPAPRG 471          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_THEAN (Heat shock 70 kDa protein OS=Theileria annulata GN=TA11610 PE=3 SV=2)

HSP 1 Score: 277.33 bits (708), Expect = 5.464e-74
Identity = 144/235 (61.28%), Postives = 171/235 (72.77%), Query Frame = 3
Query:    6 MVNHFVQEFKRKNK-KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            +V H V++F R N  K+IS N RALRRLRT CERAKR LSS+ Q TIE+DSLYEGID+ TTI+RARFEEL  + FR  + PVEK L  + +DK S+H+VVLVGGSTRIPK+Q L+++FFNGKE C+SINPDE           ILSG  +EK+Q+             ETAGGVMTVLI RNTTIPTK  Q+F+T  D Q GVLIQV+EGER  T+DNNLLGKF  +GI PAPRG
Sbjct:  237 LVEHCVRDFMRLNNGKNISSNKRALRRLRTHCERAKRVLSSSTQATIELDSLYEGIDYNTTISRARFEELCNEKFRSTLVPVEKALESSGLDKRSIHEVVLVGGSTRIPKIQTLIKNFFNGKEPCRSINPDEAVAYGAAVQAAILSGNQSEKIQELLLLDVAPLSLGLETAGGVMTVLIKRNTTIPTKKNQIFTTNEDRQEGVLIQVFEGERAMTKDNNLLGKFHLTGIAPAPRG 471          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP7X_PIG (Heat shock 70 kDa protein (Fragment) OS=Sus scrofa PE=2 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 7.890e-73
Identity = 141/211 (66.82%), Postives = 159/211 (75.36%), Query Frame = 3
Query:   78 RRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFS-TYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            RRLRTACERAKRTLSS+ Q T+EIDSL+EG+DFYT+ITRARFEEL  DLFR  +EPVEK LRDAK+DK+ +HD+VLVGGSTRIPK+Q+LLQDFFNG+EL KSINPDE           +L G+  EKVQD             ETAGGVMT LI RN TIPTK  Q F     +NQPGVLIQVYEGER  TRDNNLLG+F+ S IPP PRG
Sbjct:    1 RRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDIVLVGGSTRIPKIQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAVLMGDKCEKVQDLLLLDVAPLSLGLETAGGVMTTLIQRNATIPTKQTQNFHYLLQNNQPGVLIQVYEGERAMTRDNNLLGRFELSRIPPTPRG 211          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_MIMIV (Heat shock 70 kDa protein homolog OS=Acanthamoeba polyphaga mimivirus GN=HSP70 PE=3 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.488e-71
Identity = 137/235 (58.30%), Postives = 174/235 (74.04%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+V   V++FKRK K D++ + +ALRRLRTACERAKR LSS+ QTTIE+DSL+EGID+  T+TRA+FEEL  DLFR  +EPVEK L D+K+DKS VH++VLVGGS+RIPKV+QLL +FFNGK+L +++NPDE           IL G+ +EK+Q+             ETAGG+MT +I RNTTIP K  +VF+TYSDNQ  V IQ++EGER  T+DNN LG F+  GIPPA RG
Sbjct:  236 RLVTWCVEDFKRKYKTDLNQSAKALRRLRTACERAKRALSSSTQTTIEVDSLFEGIDYNVTLTRAKFEELCSDLFRAGLEPVEKVLLDSKLDKSQVHEIVLVGGSSRIPKVRQLLSNFFNGKKLNETVNPDEAVAYGAAIQAAILVGQTDEKLQNIVLVDVTPLSLGLETAGGIMTNIIDRNTTIPCKKSRVFTTYSDNQTVVTIQIFEGERKFTKDNNNLGTFNLEGIPPAQRG 470          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: BIP1_ARATH (Luminal-binding protein 1 OS=Arabidopsis thaliana GN=At5g28540 PE=1 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 4.052e-69
Identity = 133/235 (56.60%), Postives = 166/235 (70.64%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R++ +F++  K+K++KDIS + +AL +LR  CERAKR LSS  Q  +EI+SL++G+DF   +TRARFEELN DLFRK M PV+K + DA + KS + ++VLVGGSTRIPKVQQLL+DFF GKE  K +NPDE           ILSGEG ++ +D             ET GGVMT LIPRNT IPTK  QVF+TY D Q  V IQV+EGER+ T+D  LLGKFD +GIPPAPRG
Sbjct:  267 RVMEYFIKLIKKKHQKDISKDNKALGKLRRECERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDFFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLNGIPPAPRG 501          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: GRP78_PICAN (78 kDa glucose-regulated protein homolog OS=Pichia angusta GN=BiP PE=3 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 9.027e-69
Identity = 133/235 (56.60%), Postives = 168/235 (71.49%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+V HF++ FK+K+  DIS N +AL +L+   E+AKRTLSS   T IEIDS  +GIDF  +++RA+FEELNMDLF+K ++PV++ L DAKM    + DVV VGGSTRIPKVQ+L+++FFNGK++ K INPDE           +LSGE  E V+D             ET+GGVMT LI RNT IPT+  Q+FST +DNQP VLIQVYEGER   +DNNLLGKF+ +GIPPAPRG
Sbjct:  271 RVVRHFIKVFKKKHGIDISDNSKALAKLKREVEKAKRTLSSQMSTRIEIDSFVDGIDFSESLSRAKFEELNMDLFKKTLKPVQQVLDDAKMKPDEIDDVVFVGGSTRIPKVQELIENFFNGKKISKGINPDEAVAFGAAVQGGVLSGE--EGVEDIVLIDVNPLTLGIETSGGVMTTLIKRNTPIPTQKSQIFSTAADNQPVVLIQVYEGERAMAKDNNLLGKFELTGIPPAPRG 503          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: GRP78_NEUCR (78 kDa glucose-regulated protein homolog OS=Neurospora crassa GN=grp78 PE=3 SV=3)

HSP 1 Score: 259.996 bits (663), Expect = 9.027e-69
Identity = 130/235 (55.32%), Postives = 169/235 (71.91%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R++NHF + F +K+  D++ + +A+ +L+   E+AKRTLSS   T IEI++ Y+G DF  T+TRA+FEELN DLF+K ++PVE+ L+DAK+ KS + D+VLVGGSTRIPKVQ L+++FFNGK+  K INPDE           +LSGE  E  +D             ET GGVMT LIPRNT IPT+  Q+FST +DNQP VLIQVYEGER+ T+DNNLLGKF+ +GIPPAPRG
Sbjct:  270 RIINHFAKLFNKKHGVDVTKDAKAMGKLKREAEKAKRTLSSQMSTRIEIEAFYDGKDFSETLTRAKFEELNNDLFKKTLKPVEQVLKDAKVSKSEIDDIVLVGGSTRIPKVQALIEEFFNGKKASKGINPDEAVAFGAAVQAGVLSGE--EGTEDIVLMDVNPLTLGIETTGGVMTKLIPRNTPIPTRKSQIFSTAADNQPVVLIQVYEGERSMTKDNNLLGKFELTGIPPAPRG 502          
The following BLAST results are available for this feature:
BLAST of CB250245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_LEIDO4.043e-7763.98Heat shock 70 kDa protein OS=Leishmania donovani G... [more]
HSP70_TRYCR6.896e-7763.98Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=... [more]
HSP70_LEIAM1.176e-7663.14Heat shock 70 kDa protein OS=Leishmania amazonensi... [more]
HSP70_THEPA5.464e-7461.28Heat shock 70 kDa protein OS=Theileria parva GN=TP... [more]
HSP70_THEAN5.464e-7461.28Heat shock 70 kDa protein OS=Theileria annulata GN... [more]
HSP7X_PIG7.890e-7366.82Heat shock 70 kDa protein (Fragment) OS=Sus scrofa... [more]
HSP70_MIMIV1.488e-7158.30Heat shock 70 kDa protein homolog OS=Acanthamoeba ... [more]
BIP1_ARATH4.052e-6956.60Luminal-binding protein 1 OS=Arabidopsis thaliana ... [more]
GRP78_PICAN9.027e-6956.6078 kDa glucose-regulated protein homolog OS=Pichia... [more]
GRP78_NEUCR9.027e-6955.3278 kDa glucose-regulated protein homolog OS=Neuros... [more]

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Properties
Property NameValue
Genbank descriptionEST0007 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ007 similar to 70 kDa heat shock protein (acc# P27322), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250245 ID=CB250245; Name=CB250245; organism=Citrus sinensis; type=EST; length=709bp
ACAGAATGGTGAACCACTTTGTTCAAGAGTTCAAGAGGAAAAACAAGAAG
GATATTAGTGGAAACCCCAGAGCGTTGAGGAGGTTGAGAACCGCCTGTGA
AAGGGCTAAGAGGACCCTGTCATCAACTGCACAGACTACAATTGAGATTG
ATTCTTTATATGAGGGTATTGATTTCTACACAACCATTACAAGGGCTAGA
TTCGAAGAGTTGAACATGGATTTGTTCAGGAAGTGTATGGAGCCAGTGGA
GAAATGCCTGAGAGATGCTAAGATGGACAAGAGCAGTGTCCATGATGTGG
TTCTTGTTGGTGGGTCTACTAGGATCCCAAAAGTCCAGCAACTGTTGCAG
GACTTCTTCAATGGAAAAGAGCTATGCAAGAGCATCAACCCTGATGAAGC
GGTTGCCTACGGTGCTGCTGTGCAGGCTGCAATCTTGAGTGGTGAGGGTA
ATGAGAAGGTTCAGGACCTCTTATTGCTTGACGTCACCCCTCTATCGCTG
GGTTTGGAGACTGCTGGTGGAGTCATGACTGTGTTGATTCCAAGGAACAC
CACTATTCCAACCAAGAATGAGCAGGTGTTCTCCACATACTCTGACAACC
AGCCCGGGGTGTTGATCCAGGTCTACGAGGGTGAGCGCACAAGAACCCGT
GACAACAACTTGCTTGGAAAGTTTGATCCCTCTGGCATTCCTCCTGCTCC
AAGAGGGGT
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