CB250245

Overview
NameCB250245
Unique NameCB250245
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13846 contig Csv1_Contig13846:683..1391. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP76_SAGOE (Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 6.013e-89
Identity = 163/235 (69.36%), Postives = 187/235 (79.57%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+VNHFV+EF+RK++KD+S N RALRRLRTACERAKRTLSS+ Q T+EIDSL+EG+DFYT+ITRARFEEL  DLFR  +EPVEK LRDAK+DK+ +HDVVLVGGSTRIP+VQ+LLQDFFNGKEL KSINPDE           +L G+  EKV+D             ETAGGVMT LI RN TIPTK  Q F+TYSDNQPGV IQVYEGER  T+DNNLLG+F+ SGIPPAPRG
Sbjct:  238 RLVNHFVEEFRRKHRKDLSWNKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDVVLVGGSTRIPRVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAVLMGDKCEKVRDLLLLDVAPLSLGLETAGGVMTTLIQRNATIPTKQTQTFTTYSDNQPGVFIQVYEGERAMTKDNNLLGRFELSGIPPAPRG 472          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP71_PICAN (Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 PE=1 SV=2)

HSP 1 Score: 326.635 bits (836), Expect = 7.853e-89
Identity = 163/235 (69.36%), Postives = 187/235 (79.57%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+VNHF  EFKRK KKD++ N RALRRLRTACERAKRTLSS+AQT++EIDSLYEGIDFYT+ITRARFEEL  DLFR  ++PVEK +RD K+DKS V ++VLVGGSTRIPK+Q+L+ DFFNGKE  KSINPDE           IL+G+ + K QD             ETAGGVMT LIPRNTTIPTK  ++FSTYSDNQPGVLIQVYEGER +T+DNNLLGKF+ SGIPPAPRG
Sbjct:  236 RLVNHFANEFKRKYKKDLTTNQRALRRLRTACERAKRTLSSSAQTSVEIDSLYEGIDFYTSITRARFEELCQDLFRSTLDPVEKVMRDGKLDKSQVAEIVLVGGSTRIPKIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILTGDTSSKTQDLLLLDVAPLSLGIETAGGVMTKLIPRNTTIPTKKSEIFSTYSDNQPGVLIQVYEGERAKTKDNNLLGKFELSGIPPAPRG 470          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP71_CANAL (Heat shock protein SSA1 OS=Candida albicans GN=SSA1 PE=1 SV=2)

HSP 1 Score: 325.865 bits (834), Expect = 1.340e-88
Identity = 164/235 (69.79%), Postives = 188/235 (80.00%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+VN F+QEFKRKNKKDIS N RALRRLRTACERAKRTLSS+AQT+IEIDSLYEGIDFYT+ITRARFEEL  DLFR  ++PV K L DAK+DKS V ++VLVGGSTRIPK+Q+L+ DFFNGKEL KSINPDE           IL+G+ + K QD             ETAGG+MT LIPRN+TIPTK  + FSTY+DNQPGVLIQV+EGER +T+DNNLLGKF+ SGIPPAPRG
Sbjct:  235 RLVNFFIQEFKRKNKKDISTNQRALRRLRTACERAKRTLSSSAQTSIEIDSLYEGIDFYTSITRARFEELCADLFRSTLDPVGKVLADAKIDKSQVEEIVLVGGSTRIPKIQKLVSDFFNGKELNKSINPDEAVAYGAAVQAAILTGDTSSKTQDILLLDVAPLSLGIETAGGIMTKLIPRNSTIPTKKSETFSTYADNQPGVLIQVFEGERAKTKDNNLLGKFELSGIPPAPRG 469          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_TRIRU (Heat shock 70 kDa protein OS=Trichophyton rubrum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 1.749e-88
Identity = 166/236 (70.34%), Postives = 188/236 (79.66%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+VNHFV EFKRKNKKD+S N RALRRLRTACERAKRTLSS AQT+IEIDSLYEG+DFYT+ITRARFEEL  DLFR  MEPVE+ LRDAK+DKSSVH++VLVGGSTRIPK+Q+++ DFFNGKE  KSINPDE           ILSG+ + K   +             ETAGGVMT LI RNTTIPTK  + FST+SDNQPGVLIQV+EGER RT+DNNLLGKF+ +GIPPAPRG
Sbjct:  234 RLVNHFVNEFKRKNKKDLSTNARALRRLRTACERAKRTLSSAAQTSIEIDSLYEGVDFYTSITRARFEELCQDLFRSTMEPVERVLRDAKIDKSSVHEIVLVGGSTRIPKIQKMVSDFFNGKEPNKSINPDEGVAYGAAVQAAILSGDTSSKSTNEILLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSETFSTFSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRG 469          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 324.324 bits (830), Expect = 3.897e-88
Identity = 164/235 (69.79%), Postives = 188/235 (80.00%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+VN F+QEFKRKNKKDIS N RALRRLRTACERAKRTLSS+AQT+IEIDSLYEGIDFYT+ITRARFEEL  DLFR  +EPV+K L DAK+DKS V ++VLVGGSTRIPKVQ+L+ D+FNGKE  +SINPDE           ILSG+ + K QD             ETAGG+MT LIPRN+TIPTK  + FSTY+DNQPGVLIQV+EGER +T+DNNLLGKF+ SGIPPAPRG
Sbjct:  234 RLVNFFIQEFKRKNKKDISTNQRALRRLRTACERAKRTLSSSAQTSIEIDSLYEGIDFYTSITRARFEELCADLFRSTLEPVDKVLSDAKIDKSKVDEIVLVGGSTRIPKVQKLVSDYFNGKEPNRSINPDEAVAYGAAVQAAILSGDTSSKTQDLLLLDVAPLSLGIETAGGIMTKLIPRNSTIPTKKSETFSTYADNQPGVLIQVFEGERAQTKDNNLLGKFELSGIPPAPRG 468          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP71_CERAE (Heat shock 70 kDa protein 1 OS=Cercopithecus aethiops GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 5.090e-88
Identity = 162/233 (69.53%), Postives = 187/233 (80.26%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAP 701
            R+VNHFV+EFKRK+KKDIS N RA+RRLRTACERAKRTLSS+ Q ++EIDSL+EGIDFYT+ITRARFEEL  DLFR  +EPVEK LRDAK+DK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE           IL G+ +E VQD             ET GGVMT LI RN+TIPTK  Q+F+TYSDNQPGVLIQVYEGER  T+DNNLLG+F+ SGIPPAP
Sbjct:  234 RLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETPGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFELSGIPPAP 466          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 5.090e-88
Identity = 163/235 (69.36%), Postives = 189/235 (80.43%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            RMVNHF + FKRK+KKDI+ N RA+RRLRTACERAKRTLSS+ Q +IEIDSL+EGIDFYT+ITRARFEEL  DLFR  +EPVEK LRDAK+DK+ +H++VLVGGSTRIPK+Q+LLQDFFNG+EL KSINPDE           IL G+ +E +QD             ETAGGVMTVLI RN+TIPTK  Q+F+TYSDNQPGVLIQVYEGER  T+DN+LLGKF+ SGIPPAPRG
Sbjct:  238 RMVNHFHEPFKRKHKKDITKNKRAVRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELCADLFRGPLEPVEKALRDAKLDKAQIHEIVLVGGSTRIPKIQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILMGDKSENLQDLLLLDVAPLSLGLETAGGVMTVLIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNSLLGKFELSGIPPAPRG 472          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_ECHGR (Heat shock cognate 70 kDa protein OS=Echinococcus granulosus GN=HSP70 PE=2 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 1.134e-87
Identity = 166/236 (70.34%), Postives = 187/236 (79.24%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNK-KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+VNHFV+EFKRK+K KD++ N RA+RRLRTACERAKRTLSS+AQ  IEIDSL EGIDFYT+ITRARFEEL  DLFR  ++PVEK LRDAK+DK +VH++VLVGGSTRIPKVQ+LLQDFFNG+EL KSINPDE           IL+G+ +E VQD             ETAGGVMT LI RNTTIPTK  Q F+TYSDNQPGVLIQVYEGER   RDNNLLGKF+ SGIPP PRG
Sbjct:  237 RLVNHFVEEFKRKHKGKDLTTNKRAVRRLRTACERAKRTLSSSAQANIEIDSLLEGIDFYTSITRARFEELCSDLFRSTLDPVEKALRDAKLDKGAVHEIVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILTGDKSEAVQDLLLLDVAPLSLGLETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMKRDNNLLGKFELSGIPPGPRG 472          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 321.627 bits (823), Expect = 2.526e-87
Identity = 164/236 (69.49%), Postives = 187/236 (79.24%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+VNHFV EFKRK+KKD+S N RALRRLRTACERAKRTLSS AQT+IEIDSLYEGIDFYT+ITRARFEEL  DLFR  M+PVE+ LRDAK+DKSSVH++VLVGGSTRIP++Q+L+ DFFNGKE  KSINPDE           ILSG+   K   +             ETAGGVMT LI RNTTIPTK  + FST++DNQPGVLIQV+EGER RT+DNNLLGKF+ +GIPPAPRG
Sbjct:  234 RLVNHFVNEFKRKHKKDLSSNARALRRLRTACERAKRTLSSAAQTSIEIDSLYEGIDFYTSITRARFEELCQDLFRSTMDPVERVLRDAKIDKSSVHEIVLVGGSTRIPRIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILSGDTTSKSTNEILLLDVAPLSVGIETAGGVMTPLIKRNTTIPTKKSETFSTFADNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRG 469          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 2.526e-87
Identity = 162/235 (68.94%), Postives = 184/235 (78.30%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            RMV+H  +EFKRK+KKDI+ N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEG+DFYT+ITRARFEELN DLFR  +EPVEK LRDAK+DK  + ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           IL G+ +E VQD             ETAGGVMT LI RNTTIPTK  Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKFD +GIPPAPRG
Sbjct:  239 RMVSHLAEEFKRKHKKDIAPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRVTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRG 473          
The following BLAST results are available for this feature:
BLAST of CB250245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP76_SAGOE6.013e-8969.36Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN... [more]
HSP71_PICAN7.853e-8969.36Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 ... [more]
HSP71_CANAL1.340e-8869.79Heat shock protein SSA1 OS=Candida albicans GN=SSA... [more]
HSP70_TRIRU1.749e-8870.34Heat shock 70 kDa protein OS=Trichophyton rubrum G... [more]
HSP72_CANAL3.897e-8869.79Heat shock protein SSA2 OS=Candida albicans GN=SSA... [more]
HSP71_CERAE5.090e-8869.53Heat shock 70 kDa protein 1 OS=Cercopithecus aethi... [more]
HSP70_PLEWA5.090e-8869.36Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]
HSP70_ECHGR1.134e-8770.34Heat shock cognate 70 kDa protein OS=Echinococcus ... [more]
HSP72_PARBA2.526e-8769.49Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
HSP72_CAPHI2.526e-8768.94Heat shock-related 70 kDa protein 2 OS=Capra hircu... [more]

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Properties
Property NameValue
Genbank descriptionEST0007 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ007 similar to 70 kDa heat shock protein (acc# P27322), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250245 ID=CB250245; Name=CB250245; organism=Citrus sinensis; type=EST; length=709bp
ACAGAATGGTGAACCACTTTGTTCAAGAGTTCAAGAGGAAAAACAAGAAG
GATATTAGTGGAAACCCCAGAGCGTTGAGGAGGTTGAGAACCGCCTGTGA
AAGGGCTAAGAGGACCCTGTCATCAACTGCACAGACTACAATTGAGATTG
ATTCTTTATATGAGGGTATTGATTTCTACACAACCATTACAAGGGCTAGA
TTCGAAGAGTTGAACATGGATTTGTTCAGGAAGTGTATGGAGCCAGTGGA
GAAATGCCTGAGAGATGCTAAGATGGACAAGAGCAGTGTCCATGATGTGG
TTCTTGTTGGTGGGTCTACTAGGATCCCAAAAGTCCAGCAACTGTTGCAG
GACTTCTTCAATGGAAAAGAGCTATGCAAGAGCATCAACCCTGATGAAGC
GGTTGCCTACGGTGCTGCTGTGCAGGCTGCAATCTTGAGTGGTGAGGGTA
ATGAGAAGGTTCAGGACCTCTTATTGCTTGACGTCACCCCTCTATCGCTG
GGTTTGGAGACTGCTGGTGGAGTCATGACTGTGTTGATTCCAAGGAACAC
CACTATTCCAACCAAGAATGAGCAGGTGTTCTCCACATACTCTGACAACC
AGCCCGGGGTGTTGATCCAGGTCTACGAGGGTGAGCGCACAAGAACCCGT
GACAACAACTTGCTTGGAAAGTTTGATCCCTCTGGCATTCCTCCTGCTCC
AAGAGGGGT
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